Cow genome map
| Conread name: | Pig3-SRG8005N12 |
| Conread position: | 103-299 |
| Cow position: | chr16:39385306-39385105 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 106-272 |
| Cow position: | chr16:8366925-8367093 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 145 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 106-281 |
| Cow position: | chr16:52834988-52835154 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 41 |
| Conread position: | 106-282 |
| Cow position: | chr16:24148053-24147877 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 106-294 |
| Cow position: | chr16:54227829-54228019 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 135, 65 |
| Conread position: | 106-299 |
| Cow position: | chr16:56231722-56231527 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 107-215 |
| Cow position: | chr16:12085883-12085991 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-222 |
| Cow position: | chr16:45676958-45677069 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 107-242 |
| Cow position: | chr16:25839513-25839380 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 107-255 |
| Cow position: | chr16:33704701-33704547 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 107-257 |
| Cow position: | chr16:935548-935699 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 107-259 |
| Cow position: | chr16:11615338-11615483 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 135, 45 |
| Conread position: | 107-263 |
| Cow position: | chr16:37669842-37669987 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 128, 45 |
| Conread position: | 107-268 |
| Cow position: | chr16:11105447-11105294 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 107-281 |
| Cow position: | chr16:6379213-6379389 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 132, 73 |
| Conread position: | 107-281 |
| Cow position: | chr16:33507961-33507786 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 148 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 107-288 |
| Cow position: | chr16:31122351-31122534 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 151 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 107-293 |
| Cow position: | chr16:48095867-48096052 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 107-293 |
| Cow position: | chr16:51598711-51598891 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 107-294 |
| Cow position: | chr16:24825966-24825777 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 122, 48 |
| Conread position: | 107-298 |
| Cow position: | chr16:48370053-48370241 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 189, 66 |
| Conread position: | 107-299 |
| Cow position: | chr16:39514181-39514380 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 160 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 138, 89 |
| Conread position: | 108-263 |
| Cow position: | chr16:41752679-41752832 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 60 |
| Conread position: | 109-294 |
| Cow position: | chr16:51500826-51500642 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 109-298 |
| Cow position: | chr16:13306971-13307157 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 187, 43 |
| Conread position: | 109-298 |
| Cow position: | chr16:51578524-51578714 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 111-266 |
| Cow position: | chr16:20025337-20025182 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 126, 73 |
Show alignments to all cow chromosomes.