Cow genome map
| Conread name: | Pig3-SRG8005N12 |
| Conread position: | 1-294 |
| Cow position: | chr17:40802842-40802563 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 28-298 |
| Cow position: | chr17:40406321-40406053 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 51 |
| Conread position: | 102-294 |
| Cow position: | chr17:40331705-40331520 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 106-246 |
| Cow position: | chr17:5006551-5006692 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 50 |
| Conread position: | 107-226 |
| Cow position: | chr17:34207883-34208000 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 107-236 |
| Cow position: | chr17:12536533-12536658 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 107-240 |
| Cow position: | chr17:21207196-21207329 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-251 |
| Cow position: | chr17:27429517-27429372 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 107-258 |
| Cow position: | chr17:35371887-35372029 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 130, 43 |
| Conread position: | 107-262 |
| Cow position: | chr17:3182649-3182801 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 67, 49 |
| Conread position: | 107-263 |
| Cow position: | chr17:30713284-30713135 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 130, 67 |
| Conread position: | 107-272 |
| Cow position: | chr17:15102949-15103115 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 138 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 107-272 |
| Cow position: | chr17:35126643-35126487 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 135, 45 |
| Conread position: | 107-293 |
| Cow position: | chr17:9117582-9117395 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 107-294 |
| Cow position: | chr17:25541878-25542061 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 153 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 133, 49 |
| Conread position: | 107-295 |
| Cow position: | chr17:21243848-21244043 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 157 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 146, 175 |
| Conread position: | 107-298 |
| Cow position: | chr17:20269537-20269358 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 189, 49 |
| Conread position: | 107-298 |
| Cow position: | chr17:21039214-21039024 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 130, 108 |
| Conread position: | 107-299 |
| Cow position: | chr17:1410304-1410501 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 159, 130 |
| Conread position: | 107-299 |
| Cow position: | chr17:8644975-8644782 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 95 |
| Conread position: | 107-299 |
| Cow position: | chr17:13922414-13922223 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 122, 160 |
| Conread position: | 107-299 |
| Cow position: | chr17:26818514-26818707 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 0 |
| Conread position: | 107-323 |
| Cow position: | chr17:18592379-18592159 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 111-273 |
| Cow position: | chr17:21017729-21017566 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 121, 0 |
Show alignments to all cow chromosomes.