Cow genome map
| Conread name: | Pig3-SRG8005N12 |
| Conread position: | 36-281 |
| Cow position: | chr2:44007264-44007019 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 101-264 |
| Cow position: | chr2:46262350-46262185 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 138 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 103-305 |
| Cow position: | chr2:44167974-44167786 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 134, 35 |
| Conread position: | 106-194 |
| Cow position: | chr2:34750084-34750172 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 76 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 106-235 |
| Cow position: | chr2:19597693-19597564 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 106-255 |
| Cow position: | chr2:1203581-1203430 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 106-298 |
| Cow position: | chr2:64212662-64212852 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 156 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 186, 136 |
| Conread position: | 106-302 |
| Cow position: | chr2:46357736-46357550 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 131, 50 |
| Conread position: | 107-207 |
| Cow position: | chr2:4655201-4655301 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-228 |
| Cow position: | chr2:38362473-38362594 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-238 |
| Cow position: | chr2:68716774-68716901 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 107-240 |
| Cow position: | chr2:69770398-69770269 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 107-248 |
| Cow position: | chr2:50777670-50777532 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 129, 51 |
| Conread position: | 107-257 |
| Cow position: | chr2:21382958-21383109 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 107-257 |
| Cow position: | chr2:39584349-39584199 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-260 |
| Cow position: | chr2:46909539-46909698 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 107-262 |
| Cow position: | chr2:1658389-1658242 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 135, 63 |
| Conread position: | 107-262 |
| Cow position: | chr2:42872166-42872010 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 132 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 107-269 |
| Cow position: | chr2:46033227-46033074 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 107-271 |
| Cow position: | chr2:32416960-32417125 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 132, 101 |
| Conread position: | 107-271 |
| Cow position: | chr2:46189203-46189356 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 107-272 |
| Cow position: | chr2:24434381-24434552 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 45, 146 |
| Conread position: | 107-272 |
| Cow position: | chr2:42927552-42927718 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 139 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 107-272 |
| Cow position: | chr2:46245540-46245705 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 134, 95 |
| Conread position: | 107-272 |
| Cow position: | chr2:47138736-47138570 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 107-272 |
| Cow position: | chr2:73094893-73095051 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 132, 45 |
| Conread position: | 107-275 |
| Cow position: | chr2:45619500-45619665 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 133, 42 |
| Conread position: | 107-281 |
| Cow position: | chr2:53649923-53649750 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 151 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 121 |
| Conread position: | 107-282 |
| Cow position: | chr2:39815388-39815563 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 144 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-291 |
| Cow position: | chr2:68488110-68488295 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 151 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 107-292 |
| Cow position: | chr2:45784626-45784449 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 107-293 |
| Cow position: | chr2:21284829-21284651 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 130, 49 |
| Conread position: | 107-294 |
| Cow position: | chr2:32114971-32114776 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 107-294 |
| Cow position: | chr2:34695136-34694949 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 134, 64 |
| Conread position: | 107-294 |
| Cow position: | chr2:43624632-43624816 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 134, 44 |
| Conread position: | 107-294 |
| Cow position: | chr2:46227361-46227179 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 152 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 107-295 |
| Cow position: | chr2:43994833-43994644 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 107-298 |
| Cow position: | chr2:1352220-1352403 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 130, 49 |
| Conread position: | 107-298 |
| Cow position: | chr2:23120867-23121051 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 134, 49 |
| Conread position: | 107-298 |
| Cow position: | chr2:52344649-52344468 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 159 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 189, 45 |
| Conread position: | 107-299 |
| Cow position: | chr2:2673421-2673230 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 189, 122 |
| Conread position: | 107-299 |
| Cow position: | chr2:14884179-14883988 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 160, 55 |
| Conread position: | 107-299 |
| Cow position: | chr2:45499307-45499492 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 130, 49 |
| Conread position: | 107-299 |
| Cow position: | chr2:45575099-45575291 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 157 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 130, 48 |
| Conread position: | 107-299 |
| Cow position: | chr2:45912739-45912933 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 87, 39 |
| Conread position: | 107-299 |
| Cow position: | chr2:61681489-61681296 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 130, 93 |
| Conread position: | 107-323 |
| Cow position: | chr2:44170455-44170236 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 108-261 |
| Cow position: | chr2:84480622-84480776 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 131, 137 |
| Conread position: | 108-263 |
| Cow position: | chr2:13684601-13684448 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 134 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 108-301 |
| Cow position: | chr2:55877282-55877108 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 109-200 |
| Cow position: | chr2:61131106-61131015 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 79 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-255 |
| Cow position: | chr2:24393792-24393939 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 109-292 |
| Cow position: | chr2:55526864-55527049 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 152 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 125, 146 |
| Conread position: | 109-298 |
| Cow position: | chr2:75561733-75561543 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 110-299 |
| Cow position: | chr2:44032644-44032822 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 129, 38 |
Show alignments to all cow chromosomes.