Cow genome map
| Conread name: | Pig3-SRG8005N12 |
| Conread position: | 106-263 |
| Cow position: | chr21:29002199-29002357 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 106-293 |
| Cow position: | chr21:42024081-42023910 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 136, 37 |
| Conread position: | 106-298 |
| Cow position: | chr21:29069370-29069559 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 136, 50 |
| Conread position: | 107-195 |
| Cow position: | chr21:27810366-27810278 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 77 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-226 |
| Cow position: | chr21:18800571-18800686 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 107-234 |
| Cow position: | chr21:27624667-27624547 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 107-250 |
| Cow position: | chr21:13488480-13488337 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 130, 40 |
| Conread position: | 107-251 |
| Cow position: | chr21:28190990-28190845 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 107-252 |
| Cow position: | chr21:15611109-15610971 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 107-257 |
| Cow position: | chr21:18828348-18828498 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-266 |
| Cow position: | chr21:35569421-35569582 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 92, 45 |
| Conread position: | 107-271 |
| Cow position: | chr21:24598619-24598456 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 120, 43 |
| Conread position: | 107-272 |
| Cow position: | chr21:12960941-12961103 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 107-272 |
| Cow position: | chr21:29484937-29484780 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 107-289 |
| Cow position: | chr21:36297448-36297258 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 154 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 107-292 |
| Cow position: | chr21:28626198-28626017 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 152 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 130, 41 |
| Conread position: | 107-293 |
| Cow position: | chr21:395828-395653 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 107-294 |
| Cow position: | chr21:643286-643111 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 107-299 |
| Cow position: | chr21:393983-393789 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 107-299 |
| Cow position: | chr21:31691440-31691249 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 122, 159 |
| Conread position: | 108-294 |
| Cow position: | chr21:29214194-29214381 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 134, 44 |
| Conread position: | 108-299 |
| Cow position: | chr21:24131037-24130849 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 155 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 188, 44 |
| Conread position: | 108-313 |
| Cow position: | chr21:8351346-8351545 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 134, 64 |
| Conread position: | 109-294 |
| Cow position: | chr21:27569204-27569390 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 153, 56 |
| Conread position: | 111-272 |
| Cow position: | chr21:6051461-6051302 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 126, 36 |
Show alignments to all cow chromosomes.