Cow genome map
| Conread name: | Pig3-SRG8005N12 |
| Conread position: | 12-244 |
| Cow position: | chr3:75906799-75906564 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 16, 60 |
| Conread position: | 106-264 |
| Cow position: | chr3:59208686-59208531 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 136, 50 |
| Conread position: | 106-289 |
| Cow position: | chr3:59610849-59611024 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 106-294 |
| Cow position: | chr3:31047079-31047255 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 132, 68 |
| Conread position: | 106-298 |
| Cow position: | chr3:9116775-9116592 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 190, 46 |
| Conread position: | 106-298 |
| Cow position: | chr3:26894533-26894353 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 190, 59 |
| Conread position: | 106-299 |
| Cow position: | chr3:21341090-21341282 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 160 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 24, 48 |
| Conread position: | 106-299 |
| Cow position: | chr3:67704414-67704217 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 159 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 131, 49 |
| Conread position: | 107-207 |
| Cow position: | chr3:56301473-56301573 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-220 |
| Cow position: | chr3:4861560-4861451 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 107-222 |
| Cow position: | chr3:83201653-83201768 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-240 |
| Cow position: | chr3:52608058-52607925 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-241 |
| Cow position: | chr3:22716409-22716539 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 107-250 |
| Cow position: | chr3:17451059-17451203 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 107-253 |
| Cow position: | chr3:55835954-55836100 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-255 |
| Cow position: | chr3:54945999-54945851 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 130, 123 |
| Conread position: | 107-261 |
| Cow position: | chr3:38863986-38863833 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 108, 43 |
| Conread position: | 107-263 |
| Cow position: | chr3:15158912-15158759 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 130, 49 |
| Conread position: | 107-268 |
| Cow position: | chr3:73443216-73443374 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 130, 49 |
| Conread position: | 107-272 |
| Cow position: | chr3:45534425-45534590 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 137 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-281 |
| Cow position: | chr3:62826748-62826923 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 144 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 107-287 |
| Cow position: | chr3:27274402-27274233 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 133, 49 |
| Conread position: | 107-290 |
| Cow position: | chr3:65800466-65800286 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 151 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 111, 48 |
| Conread position: | 107-292 |
| Cow position: | chr3:31501222-31501042 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 154 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 107-293 |
| Cow position: | chr3:8556914-8557093 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 135, 63 |
| Conread position: | 107-293 |
| Cow position: | chr3:16004119-16004298 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 135, 49 |
| Conread position: | 107-294 |
| Cow position: | chr3:29887551-29887737 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 74 |
| Conread position: | 107-294 |
| Cow position: | chr3:53790666-53790857 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 107-295 |
| Cow position: | chr3:39969997-39970186 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 151 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 135, 167 |
| Conread position: | 107-299 |
| Cow position: | chr3:22907960-22908150 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 157 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 65, 37 |
| Conread position: | 107-299 |
| Cow position: | chr3:45881780-45881590 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 157 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 125, 49 |
| Conread position: | 108-215 |
| Cow position: | chr3:79196510-79196611 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 108-272 |
| Cow position: | chr3:78093800-78093951 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 45 |
Show alignments to all cow chromosomes.