Cow genome map
| Conread name: | Pig3-SRG8005N12 |
| Conread position: | 105-295 |
| Cow position: | chr5:20783546-20783361 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 160, 51 |
| Conread position: | 106-240 |
| Cow position: | chr5:45803984-45803851 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 106-299 |
| Cow position: | chr5:61725894-61725700 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 107-198 |
| Cow position: | chr5:41010073-41010164 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 79 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-203 |
| Cow position: | chr5:41452744-41452839 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 107-222 |
| Cow position: | chr5:6286504-6286618 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 107-258 |
| Cow position: | chr5:19813295-19813440 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 130, 49 |
| Conread position: | 107-259 |
| Cow position: | chr5:54530906-54530753 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 107-260 |
| Cow position: | chr5:30253661-30253515 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 107-260 |
| Cow position: | chr5:62172336-62172188 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 130, 45 |
| Conread position: | 107-263 |
| Cow position: | chr5:24996303-24996457 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 130, 74 |
| Conread position: | 107-263 |
| Cow position: | chr5:37814543-37814390 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 133, 35 |
| Conread position: | 107-263 |
| Cow position: | chr5:57626726-57626576 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 107-268 |
| Cow position: | chr5:9859793-9859956 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 107-268 |
| Cow position: | chr5:16893852-16894014 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 107-269 |
| Cow position: | chr5:38833043-38832878 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 135, 123 |
| Conread position: | 107-273 |
| Cow position: | chr5:67243849-67243681 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 107-281 |
| Cow position: | chr5:11229749-11229924 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 67, 168 |
| Conread position: | 107-283 |
| Cow position: | chr5:50975812-50975634 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 67, 133 |
| Conread position: | 107-288 |
| Cow position: | chr5:21828786-21828607 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 148 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 130, 48 |
| Conread position: | 107-291 |
| Cow position: | chr5:34638804-34638624 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 153 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 130, 45 |
| Conread position: | 107-293 |
| Cow position: | chr5:64321673-64321485 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 151 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 107-294 |
| Cow position: | chr5:21617378-21617191 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 151 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 133, 60 |
| Conread position: | 107-294 |
| Cow position: | chr5:64139486-64139299 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 155 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-298 |
| Cow position: | chr5:12672110-12672291 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 131, 37 |
| Conread position: | 107-298 |
| Cow position: | chr5:30302813-30302629 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 189, 44 |
| Conread position: | 107-300 |
| Cow position: | chr5:15598313-15598504 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 34 |
| Conread position: | 107-300 |
| Cow position: | chr5:27015604-27015423 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 108-251 |
| Cow position: | chr5:56028608-56028751 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 108-299 |
| Cow position: | chr5:30276616-30276425 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 158 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 89, 136 |
| Conread position: | 109-215 |
| Cow position: | chr5:6670276-6670382 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.