Cow genome map
| Conread name: | Pig3-SRG8005N12 |
| Conread position: | 101-261 |
| Cow position: | chr6:8966033-8965873 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 139 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 136, 129 |
| Conread position: | 106-263 |
| Cow position: | chr6:35613479-35613628 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 106-272 |
| Cow position: | chr6:4383421-4383265 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 106-292 |
| Cow position: | chr6:47519985-47519803 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 149 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 107-192 |
| Cow position: | chr6:57571411-57571326 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 77 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-261 |
| Cow position: | chr6:5609506-5609657 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 130, 49 |
| Conread position: | 107-263 |
| Cow position: | chr6:899356-899503 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 135, 49 |
| Conread position: | 107-264 |
| Cow position: | chr6:23248025-23248183 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 134 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 107-278 |
| Cow position: | chr6:130227-130398 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 145 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-280 |
| Cow position: | chr6:67950887-67950724 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 130, 50 |
| Conread position: | 107-283 |
| Cow position: | chr6:14958411-14958587 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 132, 146 |
| Conread position: | 107-294 |
| Cow position: | chr6:15305515-15305339 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 107-295 |
| Cow position: | chr6:54132751-54132568 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 135, 67 |
| Conread position: | 107-298 |
| Cow position: | chr6:49398680-49398871 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 134, 65 |
| Conread position: | 107-298 |
| Cow position: | chr6:52248197-52248392 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 155, 123 |
| Conread position: | 107-299 |
| Cow position: | chr6:2012953-2012763 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 45 |
| Conread position: | 107-299 |
| Cow position: | chr6:8209657-8209841 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 132, 45 |
| Conread position: | 107-299 |
| Cow position: | chr6:12551204-12551012 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 189, 89 |
| Conread position: | 107-299 |
| Cow position: | chr6:12623406-12623215 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 121 |
| Conread position: | 107-326 |
| Cow position: | chr6:31535633-31535854 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 108-240 |
| Cow position: | chr6:16423633-16423504 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 108-263 |
| Cow position: | chr6:10636104-10635958 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 109-252 |
| Cow position: | chr6:21231463-21231329 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 128, 39 |
| Conread position: | 109-272 |
| Cow position: | chr6:60350363-60350527 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 109-299 |
| Cow position: | chr6:18961584-18961778 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 47, 80 |
Show alignments to all cow chromosomes.