Cow genome map
| Conread name: | Pig3-SRG8005N12 |
| Conread position: | 104-260 |
| Cow position: | chr7:36569789-36569643 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 106-242 |
| Cow position: | chr7:50859950-50859814 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 106-294 |
| Cow position: | chr7:37361818-37361636 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 133, 30 |
| Conread position: | 106-298 |
| Cow position: | chr7:61129159-61128966 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 135, 70 |
| Conread position: | 107-228 |
| Cow position: | chr7:35793052-35792936 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 107-235 |
| Cow position: | chr7:6800615-6800743 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-240 |
| Cow position: | chr7:26737399-26737532 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 56, 66 |
| Conread position: | 107-241 |
| Cow position: | chr7:59168208-59168084 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 67, 32 |
| Conread position: | 107-258 |
| Cow position: | chr7:5914143-5913991 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 107-258 |
| Cow position: | chr7:68170663-68170809 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 107-260 |
| Cow position: | chr7:32221945-32221804 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 129, 31 |
| Conread position: | 107-260 |
| Cow position: | chr7:40406595-40406448 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 135, 74 |
| Conread position: | 107-261 |
| Cow position: | chr7:44596763-44596904 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 67, 49 |
| Conread position: | 107-269 |
| Cow position: | chr7:66748588-66748747 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 135, 67 |
| Conread position: | 107-273 |
| Cow position: | chr7:34422332-34422488 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 107-281 |
| Cow position: | chr7:35893353-35893176 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 145 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 107-281 |
| Cow position: | chr7:39415845-39415670 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 152 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 107-282 |
| Cow position: | chr7:23679655-23679831 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 149 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 107-285 |
| Cow position: | chr7:53053465-53053645 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 90, 174 |
| Conread position: | 107-289 |
| Cow position: | chr7:17950795-17950625 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 130, 36 |
| Conread position: | 107-290 |
| Cow position: | chr7:38082092-38081912 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 130, 63 |
| Conread position: | 107-291 |
| Cow position: | chr7:36533968-36533784 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 118, 53 |
| Conread position: | 107-293 |
| Cow position: | chr7:20968371-20968185 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 119, 54 |
| Conread position: | 107-293 |
| Cow position: | chr7:49106265-49106446 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 156 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 131, 60 |
| Conread position: | 107-294 |
| Cow position: | chr7:23646543-23646355 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 107-294 |
| Cow position: | chr7:40567008-40566826 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 153 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 130, 53 |
| Conread position: | 107-294 |
| Cow position: | chr7:45927221-45927399 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 107-294 |
| Cow position: | chr7:63749538-63749729 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 157 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 107-298 |
| Cow position: | chr7:47513751-47513942 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 189, 123 |
| Conread position: | 107-298 |
| Cow position: | chr7:62193503-62193314 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 189, 176 |
| Conread position: | 107-299 |
| Cow position: | chr7:10512773-10512966 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 45 |
| Conread position: | 107-299 |
| Cow position: | chr7:32819752-32819558 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 107-299 |
| Cow position: | chr7:32915046-32914861 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 161 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 189, 35 |
| Conread position: | 107-299 |
| Cow position: | chr7:61818002-61818188 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 189, 67 |
| Conread position: | 107-299 |
| Cow position: | chr7:61823918-61824107 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 107-313 |
| Cow position: | chr7:29300820-29301025 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 107-318 |
| Cow position: | chr7:46148798-46148592 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 130, 60 |
| Conread position: | 108-261 |
| Cow position: | chr7:22793284-22793132 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 130, 84 |
| Conread position: | 108-263 |
| Cow position: | chr7:52383040-52383189 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 108-263 |
| Cow position: | chr7:62553372-62553226 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 108-282 |
| Cow position: | chr7:39988338-39988173 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 134, 44 |
| Conread position: | 108-291 |
| Cow position: | chr7:32894311-32894498 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 153 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 108-298 |
| Cow position: | chr7:54712354-54712163 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 131, 138 |
| Conread position: | 108-308 |
| Cow position: | chr7:28095821-28095624 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 128, 48 |
| Conread position: | 109-281 |
| Cow position: | chr7:4138795-4138958 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 124, 43 |
| Conread position: | 109-298 |
| Cow position: | chr7:27509653-27509465 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 133, 49 |
| Conread position: | 109-299 |
| Cow position: | chr7:21316046-21315855 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 52 |
| Conread position: | 110-293 |
| Cow position: | chr7:36738061-36737886 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 67, 31 |
Show alignments to all cow chromosomes.