Cow genome map

Conread name: Pig3-SRG8007J22

Conread position: 429-625
Cow position: chr20:38090208-38090015 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 83, 24

Conread position: 440-622
Cow position: chr20:12995713-12995901 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 68, 18

Conread position: 452-615
Cow position: chr20:8652959-8652789 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 80

Conread position: 452-625
Cow position: chr20:34097676-34097851 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 33, 116

Conread position: 454-623
Cow position: chr20:37609892-37609724 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 26, 6

Conread position: 455-568
Cow position: chr20:36023090-36023205 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 56, 10

Conread position: 455-625
Cow position: chr20:8021405-8021228 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 455-625
Cow position: chr20:38515057-38514881 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 154

Conread position: 456-627
Cow position: chr20:4891852-4892019 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 56, 7

Conread position: 456-630
Cow position: chr20:35444837-35445006 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 98

Conread position: 459-625
Cow position: chr20:11368101-11368260 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 22

Conread position: 459-625
Cow position: chr20:39398746-39398583 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 87

Conread position: 460-611
Cow position: chr20:35354035-35354188 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 52, 20

Conread position: 460-625
Cow position: chr20:4931344-4931183 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 88

Conread position: 463-625
Cow position: chr20:17733297-17733457 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 23

Conread position: 463-625
Cow position: chr20:26040836-26040996 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 92

Conread position: 464-620
Cow position: chr20:36842846-36842681 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 464-621
Cow position: chr20:8547323-8547171 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 56

Conread position: 464-621
Cow position: chr20:31078044-31077886 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 106, 17

Conread position: 465-621
Cow position: chr20:28982957-28982806 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 90

Conread position: 465-624
Cow position: chr20:5814824-5814669 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 44

Conread position: 465-625
Cow position: chr20:14807141-14806989 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 97

Conread position: 465-627
Cow position: chr20:8245975-8245819 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 465-628
Cow position: chr20:2460403-2460567 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 91, 16

Conread position: 465-653
Cow position: chr20:36741721-36741539 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 21, 99

Conread position: 466-624
Cow position: chr20:15530117-15529963 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 130
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 98, 0

Conread position: 466-629
Cow position: chr20:23846408-23846566 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 80

Conread position: 466-634
Cow position: chr20:3564410-3564250 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 80

Conread position: 467-567
Cow position: chr20:1009173-1009277 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 467-593
Cow position: chr20:2298541-2298669 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 41, 25

Conread position: 467-620
Cow position: chr20:18379634-18379485 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 79

Conread position: 467-621
Cow position: chr20:26996791-26996636 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 97

Conread position: 467-625
Cow position: chr20:4944995-4945152 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 14

Conread position: 468-611
Cow position: chr20:30203567-30203419 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 468-625
Cow position: chr20:34221737-34221581 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 41, 99

Conread position: 468-634
Cow position: chr20:7425947-7426103 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 17

Conread position: 469-634
Cow position: chr20:20984252-20984086 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 101

Conread position: 470-619
Cow position: chr20:2819797-2819651 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 10

Conread position: 471-624
Cow position: chr20:5365178-5365029 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 9

Conread position: 471-625
Cow position: chr20:19201786-19201633 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 84

Conread position: 472-634
Cow position: chr20:16977586-16977750 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 40, 152

Conread position: 473-625
Cow position: chr20:19834581-19834728 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 37, 58

Conread position: 477-593
Cow position: chr20:16613165-16613046 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 70

Conread position: 477-620
Cow position: chr20:17515395-17515527 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 477-625
Cow position: chr20:23506182-23506037 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 128
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 14

Conread position: 477-626
Cow position: chr20:12420373-12420518 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 70

Conread position: 477-628
Cow position: chr20:7416914-7417068 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 477-645
Cow position: chr20:27340559-27340398 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 480-602
Cow position: chr20:7658982-7659104 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 66

Conread position: 480-618
Cow position: chr20:24491784-24491914 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 73

Conread position: 480-620
Cow position: chr20:8556027-8556162 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 70

Conread position: 480-625
Cow position: chr20:16941039-16941186 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 66

Conread position: 480-634
Cow position: chr20:23358251-23358402 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 32, 88

Conread position: 481-609
Cow position: chr20:27407653-27407775 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 80

Conread position: 481-621
Cow position: chr20:10209049-10208915 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 65

Conread position: 481-621
Cow position: chr20:12126059-12126198 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 87

Conread position: 481-621
Cow position: chr20:20099360-20099494 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 481-621
Cow position: chr20:29845297-29845157 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 75

Conread position: 481-623
Cow position: chr20:21428400-21428266 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 64

Conread position: 481-624
Cow position: chr20:7737992-7738128 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 65

Conread position: 481-624
Cow position: chr20:29755020-29754879 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 31, 75

Conread position: 481-625
Cow position: chr20:11043218-11043372 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 53

Conread position: 481-625
Cow position: chr20:14980265-14980403 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 64

Conread position: 481-625
Cow position: chr20:21291911-21291762 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 481-625
Cow position: chr20:21721462-21721312 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 481-625
Cow position: chr20:23935936-23936082 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 142

Conread position: 481-625
Cow position: chr20:32847585-32847447 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 66

Conread position: 481-625
Cow position: chr20:37358101-37357958 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 65

Conread position: 481-627
Cow position: chr20:34202884-34202735 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 88

Conread position: 481-634
Cow position: chr20:8442213-8442361 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 62

Conread position: 481-634
Cow position: chr20:22012631-22012490 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 481-650
Cow position: chr20:34881161-34881322 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 148, 27

Conread position: 481-669
Cow position: chr20:17370003-17370195 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 34, 117

Conread position: 482-624
Cow position: chr20:5703713-5703575 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 482-625
Cow position: chr20:19635937-19636074 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 30, 82

Conread position: 482-625
Cow position: chr20:26387697-26387563 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 482-669
Cow position: chr20:24070043-24069862 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 60

Conread position: 483-620
Cow position: chr20:8578495-8578356 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 25, 66

Conread position: 483-625
Cow position: chr20:5078876-5078729 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 483-629
Cow position: chr20:25009393-25009534 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 63

Conread position: 485-613
Cow position: chr20:3148919-3148798 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 44

Conread position: 485-623
Cow position: chr20:6240282-6240417 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 69

Conread position: 485-625
Cow position: chr20:5078515-5078374 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 46

Conread position: 485-625
Cow position: chr20:12581718-12581852 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 119
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 27, 60

Conread position: 485-625
Cow position: chr20:26790362-26790509 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 485-627
Cow position: chr20:3599164-3599300 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 117, 57

Conread position: 485-627
Cow position: chr20:40303644-40303787 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 25, 82

Conread position: 485-629
Cow position: chr20:5998423-5998568 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 32

Conread position: 485-632
Cow position: chr20:31468418-31468567 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 71

Conread position: 486-610
Cow position: chr20:2069894-2070015 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 67

Conread position: 487-625
Cow position: chr20:18423912-18423782 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 66

Conread position: 488-625
Cow position: chr20:39268847-39268983 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 58

Conread position: 494-611
Cow position: chr20:17925783-17925661 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 32

Conread position: 495-625
Cow position: chr20:12033398-12033520 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 496-625
Cow position: chr20:354671-354799 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 50

Conread position: 500-621
Cow position: chr20:2762196-2762072 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 106

Show alignments to all cow chromosomes.