Cow genome map
| Conread name: | Pig3-SRG8007J22 |
| Conread position: | 414-622 |
| Cow position: | chr21:10013995-10014204 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 64, 142 |
| Conread position: | 417-625 |
| Cow position: | chr21:23149605-23149823 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 439-621 |
| Cow position: | chr21:38720554-38720376 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 70, 94 |
| Conread position: | 444-598 |
| Cow position: | chr21:45636888-45637049 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 450-631 |
| Cow position: | chr21:11761856-11761680 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 61, 110 |
| Conread position: | 455-622 |
| Cow position: | chr21:22495238-22495402 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 129, 26 |
| Conread position: | 455-625 |
| Cow position: | chr21:8430807-8430977 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 101 |
| Conread position: | 456-653 |
| Cow position: | chr21:28191634-28191438 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 170, 95 |
| Conread position: | 457-621 |
| Cow position: | chr21:5214639-5214475 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 111 |
| Conread position: | 458-610 |
| Cow position: | chr21:47761426-47761579 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 84 |
| Conread position: | 458-625 |
| Cow position: | chr21:27677769-27677603 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 54, 113 |
| Conread position: | 460-621 |
| Cow position: | chr21:3135581-3135742 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 460-621 |
| Cow position: | chr21:47713724-47713881 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 462-621 |
| Cow position: | chr21:45537472-45537312 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 41, 94 |
| Conread position: | 462-625 |
| Cow position: | chr21:5486210-5486388 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 462-634 |
| Cow position: | chr21:6292031-6291861 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 50, 103 |
| Conread position: | 463-611 |
| Cow position: | chr21:41829096-41829244 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 103 |
| Conread position: | 463-618 |
| Cow position: | chr21:47719022-47719172 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 463-621 |
| Cow position: | chr21:45376229-45376075 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 84 |
| Conread position: | 463-625 |
| Cow position: | chr21:938302-938142 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 81 |
| Conread position: | 463-625 |
| Cow position: | chr21:9417862-9418035 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 463-625 |
| Cow position: | chr21:18450038-18449875 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 15, 90 |
| Conread position: | 463-625 |
| Cow position: | chr21:18800250-18800411 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 463-625 |
| Cow position: | chr21:41610460-41610290 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 463-630 |
| Cow position: | chr21:30938384-30938548 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 463-638 |
| Cow position: | chr21:11182831-11182664 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 23, 66 |
| Conread position: | 463-650 |
| Cow position: | chr21:34209733-34209917 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 464-623 |
| Cow position: | chr21:11739841-11739995 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 464-625 |
| Cow position: | chr21:41590286-41590442 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 82 |
| Conread position: | 464-625 |
| Cow position: | chr21:44732762-44732921 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 91 |
| Conread position: | 464-627 |
| Cow position: | chr21:38918484-38918319 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 98 |
| Conread position: | 465-612 |
| Cow position: | chr21:45835111-45835253 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 81 |
| Conread position: | 465-616 |
| Cow position: | chr21:44364523-44364671 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 465-624 |
| Cow position: | chr21:37479311-37479469 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 47, 101 |
| Conread position: | 465-625 |
| Cow position: | chr21:34654349-34654196 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 89 |
| Conread position: | 465-625 |
| Cow position: | chr21:36682605-36682448 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 465-625 |
| Cow position: | chr21:39845881-39845716 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 465-630 |
| Cow position: | chr21:34010118-34010278 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 44, 16 |
| Conread position: | 465-634 |
| Cow position: | chr21:48334503-48334677 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 466-586 |
| Cow position: | chr21:44486951-44486829 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 101 |
| Conread position: | 466-590 |
| Cow position: | chr21:42364262-42364389 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 466-625 |
| Cow position: | chr21:1464622-1464466 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 77 |
| Conread position: | 466-625 |
| Cow position: | chr21:9382583-9382746 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 466-625 |
| Cow position: | chr21:16797130-16796974 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 466-629 |
| Cow position: | chr21:23979899-23980063 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 93 |
| Conread position: | 466-629 |
| Cow position: | chr21:41738188-41738027 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 69 |
| Conread position: | 467-618 |
| Cow position: | chr21:20262070-20262220 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 102, 75 |
| Conread position: | 467-625 |
| Cow position: | chr21:6851442-6851295 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 45, 78 |
| Conread position: | 467-625 |
| Cow position: | chr21:9256379-9256541 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 45, 55 |
| Conread position: | 468-624 |
| Cow position: | chr21:13134873-13134724 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 468-625 |
| Cow position: | chr21:44825599-44825763 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 44, 70 |
| Conread position: | 468-625 |
| Cow position: | chr21:48242775-48242933 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 468-641 |
| Cow position: | chr21:30255981-30256166 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 166 |
| Conread position: | 469-632 |
| Cow position: | chr21:71861-71703 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 43, 96 |
| Conread position: | 470-621 |
| Cow position: | chr21:32297234-32297392 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 470-622 |
| Cow position: | chr21:31279528-31279382 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 76 |
| Conread position: | 470-625 |
| Cow position: | chr21:10004608-10004763 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 86 |
| Conread position: | 471-627 |
| Cow position: | chr21:4109050-4108896 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 72 |
| Conread position: | 472-621 |
| Cow position: | chr21:8506275-8506419 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 40, 82 |
| Conread position: | 472-621 |
| Cow position: | chr21:8509163-8509307 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 40, 82 |
| Conread position: | 472-625 |
| Cow position: | chr21:742546-742400 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 37, 74 |
| Conread position: | 472-625 |
| Cow position: | chr21:36048139-36048300 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 473-595 |
| Cow position: | chr21:33360262-33360138 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 55 |
| Conread position: | 473-625 |
| Cow position: | chr21:30835638-30835486 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 75 |
| Conread position: | 474-625 |
| Cow position: | chr21:3585094-3585245 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 100 |
| Conread position: | 475-627 |
| Cow position: | chr21:11644697-11644845 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 70 |
| Conread position: | 477-624 |
| Cow position: | chr21:15012698-15012563 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 477-625 |
| Cow position: | chr21:868652-868801 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 35, 83 |
| Conread position: | 477-625 |
| Cow position: | chr21:16498782-16498639 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 35, 66 |
| Conread position: | 477-625 |
| Cow position: | chr21:25012345-25012205 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 68 |
| Conread position: | 477-625 |
| Cow position: | chr21:36763329-36763184 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 90 |
| Conread position: | 477-625 |
| Cow position: | chr21:37299727-37299585 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 35, 54 |
| Conread position: | 477-625 |
| Cow position: | chr21:47451452-47451291 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 477-635 |
| Cow position: | chr21:12339884-12339735 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 154, 65 |
| Conread position: | 478-625 |
| Cow position: | chr21:41522147-41522292 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 478-627 |
| Cow position: | chr21:31258737-31258587 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 92 |
| Conread position: | 480-615 |
| Cow position: | chr21:41956937-41957080 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 480-620 |
| Cow position: | chr21:44815507-44815358 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 480-621 |
| Cow position: | chr21:46609739-46609877 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 89 |
| Conread position: | 480-625 |
| Cow position: | chr21:3595781-3595912 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 480-625 |
| Cow position: | chr21:8426707-8426569 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 74 |
| Conread position: | 480-625 |
| Cow position: | chr21:20153221-20153079 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 65 |
| Conread position: | 480-625 |
| Cow position: | chr21:27568895-27569050 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 480-625 |
| Cow position: | chr21:27810656-27810510 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 30, 90 |
| Conread position: | 480-625 |
| Cow position: | chr21:42680332-42680482 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 480-625 |
| Cow position: | chr21:42920736-42920882 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 90 |
| Conread position: | 480-627 |
| Cow position: | chr21:20163972-20163829 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 46 |
| Conread position: | 480-627 |
| Cow position: | chr21:23535977-23535830 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 480-635 |
| Cow position: | chr21:10264299-10264147 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 87 |
| Conread position: | 480-641 |
| Cow position: | chr21:42341677-42341830 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 74 |
| Conread position: | 480-671 |
| Cow position: | chr21:40821631-40821814 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 481-589 |
| Cow position: | chr21:674931-674819 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 481-594 |
| Cow position: | chr21:20260034-20260144 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 64 |
| Conread position: | 481-617 |
| Cow position: | chr21:2904040-2904174 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 86, 61 |
| Conread position: | 481-618 |
| Cow position: | chr21:13883740-13883616 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 481-621 |
| Cow position: | chr21:13488818-13488679 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 31, 64 |
| Conread position: | 481-621 |
| Cow position: | chr21:13584789-13584934 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 481-624 |
| Cow position: | chr21:46264454-46264294 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 481-625 |
| Cow position: | chr21:643583-643447 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 481-625 |
| Cow position: | chr21:6051768-6051626 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 65 |
| Conread position: | 481-625 |
| Cow position: | chr21:15305032-15305176 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 28, 65 |
| Conread position: | 481-625 |
| Cow position: | chr21:21616039-21615905 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 481-625 |
| Cow position: | chr21:27744292-27744148 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 31, 64 |
| Conread position: | 481-625 |
| Cow position: | chr21:29418836-29418691 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 16, 67 |
| Conread position: | 481-625 |
| Cow position: | chr21:30368337-30368199 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 65 |
| Conread position: | 481-625 |
| Cow position: | chr21:40820588-40820730 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 86 |
| Conread position: | 481-625 |
| Cow position: | chr21:44251578-44251720 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 64 |
| Conread position: | 481-626 |
| Cow position: | chr21:6042052-6041906 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 31, 89 |
| Conread position: | 481-627 |
| Cow position: | chr21:8986289-8986142 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 74 |
| Conread position: | 481-634 |
| Cow position: | chr21:17857028-17856880 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 31, 74 |
| Conread position: | 481-634 |
| Cow position: | chr21:38692458-38692312 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 481-650 |
| Cow position: | chr21:26828708-26828882 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 65 |
| Conread position: | 482-623 |
| Cow position: | chr21:28030541-28030413 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 482-625 |
| Cow position: | chr21:29069061-29069203 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 30, 63 |
| Conread position: | 482-625 |
| Cow position: | chr21:40930214-40930352 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 64 |
| Conread position: | 482-625 |
| Cow position: | chr21:48482268-48482407 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 64 |
| Conread position: | 483-625 |
| Cow position: | chr21:14674575-14674425 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 483-625 |
| Cow position: | chr21:17252716-17252856 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 71 |
| Conread position: | 483-625 |
| Cow position: | chr21:24797916-24797777 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 483-625 |
| Cow position: | chr21:24858577-24858438 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 29, 63 |
| Conread position: | 483-631 |
| Cow position: | chr21:8349583-8349444 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 146, 59 |
| Conread position: | 484-621 |
| Cow position: | chr21:7460865-7460734 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 27, 70 |
| Conread position: | 484-624 |
| Cow position: | chr21:24875612-24875477 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 72 |
| Conread position: | 484-625 |
| Cow position: | chr21:23673005-23672868 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 42 |
| Conread position: | 484-625 |
| Cow position: | chr21:28907289-28907424 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 26, 56 |
| Conread position: | 485-614 |
| Cow position: | chr21:20166040-20165914 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 60 |
| Conread position: | 485-621 |
| Cow position: | chr21:32272188-32272047 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 485-625 |
| Cow position: | chr21:16119903-16120038 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 27, 59 |
| Conread position: | 485-625 |
| Cow position: | chr21:37495685-37495821 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 61 |
| Conread position: | 485-625 |
| Cow position: | chr21:41974108-41974255 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 485-627 |
| Cow position: | chr21:11779279-11779420 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 88 |
| Conread position: | 485-627 |
| Cow position: | chr21:36508489-36508355 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 485-630 |
| Cow position: | chr21:40089507-40089650 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 24, 10 |
| Conread position: | 485-653 |
| Cow position: | chr21:29011717-29011877 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 60 |
| Conread position: | 487-621 |
| Cow position: | chr21:47464862-47464992 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 25, 69 |
| Conread position: | 487-625 |
| Cow position: | chr21:20160935-20160799 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 25, 58 |
| Conread position: | 490-608 |
| Cow position: | chr21:38665497-38665612 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 22 |
| Conread position: | 493-624 |
| Cow position: | chr21:28237448-28237584 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 493-625 |
| Cow position: | chr21:8351043-8351170 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 53 |
| Conread position: | 494-615 |
| Cow position: | chr21:17729978-17729860 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 502-620 |
| Cow position: | chr21:30223893-30224017 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 532-625 |
| Cow position: | chr21:33350957-33350864 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.