Cow genome map
| Conread name: | Pig3-SRG8007J22 |
| Conread position: | 444-634 |
| Cow position: | chr6:36203096-36202909 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 67, 31 |
| Conread position: | 445-625 |
| Cow position: | chr6:35984859-35985038 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 101 |
| Conread position: | 450-665 |
| Cow position: | chr6:15111565-15111778 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 155 |
| Conread position: | 452-625 |
| Cow position: | chr6:51529921-51530089 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 6, 61 |
| Conread position: | 454-621 |
| Cow position: | chr6:154745-154572 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 17, 65 |
| Conread position: | 454-625 |
| Cow position: | chr6:42035038-42034871 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 93 |
| Conread position: | 455-595 |
| Cow position: | chr6:60468496-60468356 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 105, 51 |
| Conread position: | 456-619 |
| Cow position: | chr6:31713741-31713571 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 456-625 |
| Cow position: | chr6:50577777-50577619 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 457-642 |
| Cow position: | chr6:55196480-55196293 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 115 |
| Conread position: | 459-625 |
| Cow position: | chr6:12965113-12964951 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 118, 21 |
| Conread position: | 459-625 |
| Cow position: | chr6:17414185-17414346 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 11, 76 |
| Conread position: | 460-594 |
| Cow position: | chr6:56825789-56825658 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 460-621 |
| Cow position: | chr6:26155404-26155251 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 460-634 |
| Cow position: | chr6:44543885-44544058 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 461-614 |
| Cow position: | chr6:21183962-21184115 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 86 |
| Conread position: | 461-621 |
| Cow position: | chr6:29291833-29291658 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 461-621 |
| Cow position: | chr6:34463335-34463485 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 461-625 |
| Cow position: | chr6:17314000-17313834 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 113 |
| Conread position: | 461-627 |
| Cow position: | chr6:67574649-67574484 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 85 |
| Conread position: | 462-625 |
| Cow position: | chr6:9736387-9736558 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 145 |
| Conread position: | 462-625 |
| Cow position: | chr6:35728107-35727948 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 462-625 |
| Cow position: | chr6:61631348-61631510 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 108 |
| Conread position: | 462-627 |
| Cow position: | chr6:10225393-10225559 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 45, 24 |
| Conread position: | 462-635 |
| Cow position: | chr6:24514276-24514453 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 48, 170 |
| Conread position: | 463-598 |
| Cow position: | chr6:35097235-35097371 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 29 |
| Conread position: | 463-621 |
| Cow position: | chr6:12761539-12761381 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 84 |
| Conread position: | 463-621 |
| Cow position: | chr6:32866964-32867116 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 463-624 |
| Cow position: | chr6:62849181-62849025 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 9, 87 |
| Conread position: | 463-625 |
| Cow position: | chr6:52478152-52478312 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 463-625 |
| Cow position: | chr6:54828062-54828224 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 22, 83 |
| Conread position: | 463-625 |
| Cow position: | chr6:54840240-54840409 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 463-627 |
| Cow position: | chr6:32287887-32287731 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 464-617 |
| Cow position: | chr6:24186343-24186491 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 84 |
| Conread position: | 464-618 |
| Cow position: | chr6:48097347-48097493 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 464-618 |
| Cow position: | chr6:56664151-56663992 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 464-621 |
| Cow position: | chr6:19936312-19936467 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 91 |
| Conread position: | 464-624 |
| Cow position: | chr6:55282036-55282193 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 46, 80 |
| Conread position: | 464-625 |
| Cow position: | chr6:5330670-5330511 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 81 |
| Conread position: | 464-625 |
| Cow position: | chr6:60850954-60850799 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 45, 22 |
| Conread position: | 464-627 |
| Cow position: | chr6:6965138-6965301 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 89 |
| Conread position: | 464-627 |
| Cow position: | chr6:47520310-47520150 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 48, 101 |
| Conread position: | 464-643 |
| Cow position: | chr6:63233773-63233596 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 46, 118 |
| Conread position: | 465-588 |
| Cow position: | chr6:16738871-16738748 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 91 |
| Conread position: | 465-593 |
| Cow position: | chr6:18954837-18954955 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 465-618 |
| Cow position: | chr6:67069560-67069705 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 465-621 |
| Cow position: | chr6:16137511-16137668 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 89 |
| Conread position: | 465-625 |
| Cow position: | chr6:7130605-7130781 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 465-625 |
| Cow position: | chr6:28559794-28559636 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 26 |
| Conread position: | 465-627 |
| Cow position: | chr6:13040710-13040537 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 21, 65 |
| Conread position: | 465-630 |
| Cow position: | chr6:54889859-54889693 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 47, 102 |
| Conread position: | 465-634 |
| Cow position: | chr6:53792223-53792378 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 465-653 |
| Cow position: | chr6:31928895-31928708 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 81 |
| Conread position: | 466-615 |
| Cow position: | chr6:59569744-59569594 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 80 |
| Conread position: | 466-625 |
| Cow position: | chr6:2078562-2078716 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 80 |
| Conread position: | 466-625 |
| Cow position: | chr6:2547515-2547354 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 94 |
| Conread position: | 466-625 |
| Cow position: | chr6:18440223-18440379 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 19, 99 |
| Conread position: | 466-625 |
| Cow position: | chr6:35341933-35342081 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 466-625 |
| Cow position: | chr6:54406551-54406701 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 466-625 |
| Cow position: | chr6:62670125-62669964 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 79 |
| Conread position: | 466-627 |
| Cow position: | chr6:60143945-60144101 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 45, 80 |
| Conread position: | 466-630 |
| Cow position: | chr6:23696248-23696094 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 467-561 |
| Cow position: | chr6:54990421-54990515 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 467-620 |
| Cow position: | chr6:59759422-59759274 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 79 |
| Conread position: | 467-621 |
| Cow position: | chr6:15243515-15243358 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 467-621 |
| Cow position: | chr6:44636260-44636407 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 92 |
| Conread position: | 467-623 |
| Cow position: | chr6:37994457-37994310 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 41, 79 |
| Conread position: | 467-625 |
| Cow position: | chr6:17997063-17997221 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 20, 81 |
| Conread position: | 467-625 |
| Cow position: | chr6:22215211-22215372 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 467-625 |
| Cow position: | chr6:38640486-38640332 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 18, 77 |
| Conread position: | 467-625 |
| Cow position: | chr6:62437670-62437513 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 44, 80 |
| Conread position: | 467-632 |
| Cow position: | chr6:63066090-63065921 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 467-634 |
| Cow position: | chr6:24468146-24468305 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 45, 79 |
| Conread position: | 467-652 |
| Cow position: | chr6:5095291-5095469 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 468-625 |
| Cow position: | chr6:16016287-16016132 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 78 |
| Conread position: | 468-625 |
| Cow position: | chr6:21004932-21004775 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 44, 87 |
| Conread position: | 468-625 |
| Cow position: | chr6:38020929-38020772 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 44 |
| Conread position: | 468-625 |
| Cow position: | chr6:61523963-61524106 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 468-627 |
| Cow position: | chr6:36570718-36570556 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 469-626 |
| Cow position: | chr6:25434775-25434937 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 35 |
| Conread position: | 469-629 |
| Cow position: | chr6:61169013-61168850 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 470-625 |
| Cow position: | chr6:11853772-11853935 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 470-625 |
| Cow position: | chr6:17404813-17404659 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 85, 146 |
| Conread position: | 470-625 |
| Cow position: | chr6:44194305-44194450 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 11, 72 |
| Conread position: | 470-625 |
| Cow position: | chr6:67044470-67044637 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 17, 78 |
| Conread position: | 470-625 |
| Cow position: | chr6:67451122-67451272 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 470-627 |
| Cow position: | chr6:8600255-8600096 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 76, 92 |
| Conread position: | 471-621 |
| Cow position: | chr6:46282745-46282901 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 471-625 |
| Cow position: | chr6:7291560-7291414 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 41, 75 |
| Conread position: | 471-625 |
| Cow position: | chr6:36939123-36938966 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 471-625 |
| Cow position: | chr6:58725615-58725468 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 471-630 |
| Cow position: | chr6:13653595-13653437 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 34, 84 |
| Conread position: | 472-621 |
| Cow position: | chr6:47356075-47355925 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 13, 65 |
| Conread position: | 472-625 |
| Cow position: | chr6:34569664-34569506 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 37, 122 |
| Conread position: | 474-625 |
| Cow position: | chr6:37332357-37332209 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 104, 51 |
| Conread position: | 476-625 |
| Cow position: | chr6:143134-143276 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 80 |
| Conread position: | 477-624 |
| Cow position: | chr6:66979114-66978965 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 28, 70 |
| Conread position: | 477-625 |
| Cow position: | chr6:120480-120344 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 477-625 |
| Cow position: | chr6:32006213-32006356 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 69 |
| Conread position: | 480-621 |
| Cow position: | chr6:17068415-17068545 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 480-621 |
| Cow position: | chr6:48278655-48278786 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 480-625 |
| Cow position: | chr6:1941594-1941733 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 66 |
| Conread position: | 480-625 |
| Cow position: | chr6:3937027-3936881 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 32, 66 |
| Conread position: | 480-625 |
| Cow position: | chr6:6401205-6401050 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 32, 115 |
| Conread position: | 480-625 |
| Cow position: | chr6:17194467-17194310 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 480-625 |
| Cow position: | chr6:21346913-21347052 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 32, 87 |
| Conread position: | 480-625 |
| Cow position: | chr6:26764582-26764729 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 32, 89 |
| Conread position: | 480-625 |
| Cow position: | chr6:57320358-57320499 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 74 |
| Conread position: | 480-625 |
| Cow position: | chr6:60186411-60186564 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 480-634 |
| Cow position: | chr6:30024117-30023976 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 480-645 |
| Cow position: | chr6:21486424-21486582 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 481-594 |
| Cow position: | chr6:38615366-38615256 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 30, 63 |
| Conread position: | 481-595 |
| Cow position: | chr6:9452488-9452606 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 481-609 |
| Cow position: | chr6:55646710-55646831 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 73 |
| Conread position: | 481-610 |
| Cow position: | chr6:29775857-29775725 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 481-621 |
| Cow position: | chr6:693906-694044 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 481-621 |
| Cow position: | chr6:19025505-19025371 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 63 |
| Conread position: | 481-621 |
| Cow position: | chr6:34423221-34423356 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 65 |
| Conread position: | 481-621 |
| Cow position: | chr6:49686059-49685920 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 481-621 |
| Cow position: | chr6:63168524-63168664 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 73 |
| Conread position: | 481-625 |
| Cow position: | chr6:14383915-14383774 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 72 |
| Conread position: | 481-625 |
| Cow position: | chr6:15243078-15242935 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 31, 87 |
| Conread position: | 481-625 |
| Cow position: | chr6:18447276-18447419 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 65 |
| Conread position: | 481-625 |
| Cow position: | chr6:29852816-29852967 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 481-625 |
| Cow position: | chr6:36643248-36643394 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 124 |
| Conread position: | 481-625 |
| Cow position: | chr6:49421557-49421693 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 100, 49 |
| Conread position: | 481-625 |
| Cow position: | chr6:57545990-57546130 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 481-625 |
| Cow position: | chr6:66058470-66058609 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 31, 80 |
| Conread position: | 481-627 |
| Cow position: | chr6:18117809-18117953 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 6, 69 |
| Conread position: | 481-628 |
| Cow position: | chr6:50504695-50504552 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 30, 65 |
| Conread position: | 481-630 |
| Cow position: | chr6:35743219-35743072 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 481-633 |
| Cow position: | chr6:25614851-25615000 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 75 |
| Conread position: | 481-649 |
| Cow position: | chr6:30688272-30688437 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 31, 10 |
| Conread position: | 481-666 |
| Cow position: | chr6:23381427-23381611 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 64 |
| Conread position: | 482-621 |
| Cow position: | chr6:5609204-5609344 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 29, 61 |
| Conread position: | 482-621 |
| Cow position: | chr6:31228981-31228834 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 482-624 |
| Cow position: | chr6:10105745-10105879 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 482-625 |
| Cow position: | chr6:25772981-25773120 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 62 |
| Conread position: | 482-625 |
| Cow position: | chr6:36537125-36537262 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 60 |
| Conread position: | 482-625 |
| Cow position: | chr6:50771123-50771264 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 483-624 |
| Cow position: | chr6:60265931-60266083 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 483-625 |
| Cow position: | chr6:38033095-38032956 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 29, 73 |
| Conread position: | 483-625 |
| Cow position: | chr6:67951194-67951048 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 483-627 |
| Cow position: | chr6:21083304-21083444 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 29, 69 |
| Conread position: | 485-618 |
| Cow position: | chr6:21293263-21293391 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 60 |
| Conread position: | 485-621 |
| Cow position: | chr6:21350796-21350931 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 27, 67 |
| Conread position: | 485-621 |
| Cow position: | chr6:58227630-58227483 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 485-624 |
| Cow position: | chr6:19264266-19264399 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 485-625 |
| Cow position: | chr6:4699940-4699806 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 61 |
| Conread position: | 485-625 |
| Cow position: | chr6:38207250-38207391 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 100 |
| Conread position: | 485-625 |
| Cow position: | chr6:38853421-38853560 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 61 |
| Conread position: | 485-627 |
| Cow position: | chr6:18903802-18903955 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 485-630 |
| Cow position: | chr6:5673629-5673472 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 486-621 |
| Cow position: | chr6:29485317-29485186 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 26, 60 |
| Conread position: | 487-617 |
| Cow position: | chr6:39358110-39358234 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 487-621 |
| Cow position: | chr6:8726910-8726780 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 58 |
| Conread position: | 492-611 |
| Cow position: | chr6:43781763-43781888 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 493-625 |
| Cow position: | chr6:15305798-15305667 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 53 |
| Conread position: | 493-625 |
| Cow position: | chr6:47344829-47344698 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 85, 21 |
| Conread position: | 493-625 |
| Cow position: | chr6:60517065-60516924 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 494-625 |
| Cow position: | chr6:68816396-68816265 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 59 |
| Conread position: | 508-630 |
| Cow position: | chr6:53235444-53235559 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.