Cow genome map


           Conread name:
           Pig3-SRG8007J22
        

               Conread position:
               436-625
               

               Cow position:
               chr9:20416728-20416536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 23
               

               Conread position:
               439-625
               

               Cow position:
               chr9:6237704-6237523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               7, 22
               

               Conread position:
               442-630
               

               Cow position:
               chr9:40005270-40005449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               450-625
               

               Cow position:
               chr9:8645060-8645236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               15, 52
               

               Conread position:
               453-625
               

               Cow position:
               chr9:44526910-44527088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               455-619
               

               Cow position:
               chr9:50382513-50382358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               54, 10
               

               Conread position:
               455-621
               

               Cow position:
               chr9:41728062-41728226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               29, 101
               

               Conread position:
               455-625
               

               Cow position:
               chr9:11380841-11380676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 91
               

               Conread position:
               455-625
               

               Cow position:
               chr9:12355589-12355756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               455-627
               

               Cow position:
               chr9:9091305-9091133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 25
               

               Conread position:
               455-657
               

               Cow position:
               chr9:53323981-53323783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               57, 25
               

               Conread position:
               456-598
               

               Cow position:
               chr9:1894212-1894069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               53, 103
               

               Conread position:
               456-625
               

               Cow position:
               chr9:4268201-4268012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               456-634
               

               Cow position:
               chr9:34423424-34423599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               54, 21
               

               Conread position:
               458-625
               

               Cow position:
               chr9:50977451-50977283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 90
               

               Conread position:
               459-625
               

               Cow position:
               chr9:13744124-13743960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               53, 20
               

               Conread position:
               460-625
               

               Cow position:
               chr9:31625940-31626104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 108
               

               Conread position:
               461-625
               

               Cow position:
               chr9:54677066-54677234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               462-621
               

               Cow position:
               chr9:58132140-58131987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 93
               

               Conread position:
               462-625
               

               Cow position:
               chr9:48046345-48046508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 114
               

               Conread position:
               463-594
               

               Cow position:
               chr9:38799910-38799777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               49, 106
               

               Conread position:
               463-625
               

               Cow position:
               chr9:4341346-4341189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               23, 83
               

               Conread position:
               463-625
               

               Cow position:
               chr9:12786664-12786503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               49, 82
               

               Conread position:
               463-625
               

               Cow position:
               chr9:36457809-36457969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               48, 14
               

               Conread position:
               463-645
               

               Cow position:
               chr9:388379-388199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               11, 85
               

               Conread position:
               464-616
               

               Cow position:
               chr9:51011987-51011830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               44, 17
               

               Conread position:
               464-624
               

               Cow position:
               chr9:5104598-5104433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               464-625
               

               Cow position:
               chr9:7952715-7952871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               464-625
               

               Cow position:
               chr9:8834317-8834157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               45, 17
               

               Conread position:
               464-625
               

               Cow position:
               chr9:28315237-28315399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               48, 110
               

               Conread position:
               465-568
               

               Cow position:
               chr9:49830130-49830235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 64
               

               Conread position:
               465-621
               

               Cow position:
               chr9:23388863-23388706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               465-621
               

               Cow position:
               chr9:23840591-23840428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               465-624
               

               Cow position:
               chr9:32662222-32662062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 118
               

               Conread position:
               465-624
               

               Cow position:
               chr9:35534187-35534030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               97, 52
               

               Conread position:
               465-625
               

               Cow position:
               chr9:6189549-6189395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               43, 78
               

               Conread position:
               465-625
               

               Cow position:
               chr9:9494975-9495126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 15
               

               Conread position:
               465-625
               

               Cow position:
               chr9:26279359-26279199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               47, 107
               

               Conread position:
               465-625
               

               Cow position:
               chr9:28747704-28747550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               47, 80
               

               Conread position:
               465-625
               

               Cow position:
               chr9:28772955-28773109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               47, 80
               

               Conread position:
               465-625
               

               Cow position:
               chr9:32858830-32858664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 139
               

               Conread position:
               465-625
               

               Cow position:
               chr9:34286612-34286769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               45, 81
               

               Conread position:
               465-625
               

               Cow position:
               chr9:61019553-61019392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 82
               

               Conread position:
               465-627
               

               Cow position:
               chr9:31694224-31694060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               20, 28
               

               Conread position:
               465-630
               

               Cow position:
               chr9:60741369-60741209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               45, 78
               

               Conread position:
               466-621
               

               Cow position:
               chr9:9403356-9403213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               466-621
               

               Cow position:
               chr9:41717881-41717726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               104, 42
               

               Conread position:
               466-625
               

               Cow position:
               chr9:6934265-6934103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               46, 20
               

               Conread position:
               466-625
               

               Cow position:
               chr9:9596138-9595982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               11, 100
               

               Conread position:
               466-625
               

               Cow position:
               chr9:9779593-9779760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               46, 14
               

               Conread position:
               466-625
               

               Cow position:
               chr9:19067583-19067753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               21, 152
               

               Conread position:
               466-625
               

               Cow position:
               chr9:22447479-22447324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 79
               

               Conread position:
               466-625
               

               Cow position:
               chr9:23956162-23956010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               44, 87
               

               Conread position:
               466-625
               

               Cow position:
               chr9:32052092-32052246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               45, 15
               

               Conread position:
               466-625
               

               Cow position:
               chr9:38624811-38624654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 101
               

               Conread position:
               466-625
               

               Cow position:
               chr9:39011652-39011499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               466-625
               

               Cow position:
               chr9:44918463-44918310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               46, 81
               

               Conread position:
               466-627
               

               Cow position:
               chr9:19657160-19657004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               20, 87
               

               Conread position:
               467-616
               

               Cow position:
               chr9:18815882-18816037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               467-621
               

               Cow position:
               chr9:29824833-29824996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 30
               

               Conread position:
               467-624
               

               Cow position:
               chr9:52510929-52511088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               15, 91
               

               Conread position:
               467-625
               

               Cow position:
               chr9:13141344-13141508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               467-625
               

               Cow position:
               chr9:32670131-32669977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               19, 57
               

               Conread position:
               467-625
               

               Cow position:
               chr9:33584868-33584715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               41, 79
               

               Conread position:
               467-625
               

               Cow position:
               chr9:54611503-54611347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               77, 45
               

               Conread position:
               467-627
               

               Cow position:
               chr9:31215897-31216052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 13
               

               Conread position:
               468-613
               

               Cow position:
               chr9:43784883-43784735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               44, 12
               

               Conread position:
               468-617
               

               Cow position:
               chr9:43876138-43875994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               41, 13
               

               Conread position:
               468-618
               

               Cow position:
               chr9:5263322-5263463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               468-621
               

               Cow position:
               chr9:3847210-3847368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               468-625
               

               Cow position:
               chr9:59699737-59699577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               18, 46
               

               Conread position:
               469-621
               

               Cow position:
               chr9:21816349-21816497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               43, 84
               

               Conread position:
               469-625
               

               Cow position:
               chr9:30194829-30194981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               43, 91
               

               Conread position:
               469-625
               

               Cow position:
               chr9:34362554-34362708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               43, 99
               

               Conread position:
               469-634
               

               Cow position:
               chr9:19771178-19771340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               38, 86
               

               Conread position:
               469-639
               

               Cow position:
               chr9:3946328-3946163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 96
               

               Conread position:
               470-615
               

               Cow position:
               chr9:20902132-20901993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               16, 44
               

               Conread position:
               470-616
               

               Cow position:
               chr9:8467879-8468020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               470-625
               

               Cow position:
               chr9:35306530-35306376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               470-627
               

               Cow position:
               chr9:48627841-48628000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               17, 69
               

               Conread position:
               471-611
               

               Cow position:
               chr9:11092344-11092207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               41, 20
               

               Conread position:
               471-621
               

               Cow position:
               chr9:59897416-59897559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 74
               

               Conread position:
               471-625
               

               Cow position:
               chr9:17872287-17872140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               41, 92
               

               Conread position:
               471-627
               

               Cow position:
               chr9:50202374-50202535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               472-620
               

               Cow position:
               chr9:55795579-55795724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               40, 73
               

               Conread position:
               472-621
               

               Cow position:
               chr9:51620265-51620411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               40, 74
               

               Conread position:
               472-623
               

               Cow position:
               chr9:34279239-34279085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               15, 74
               

               Conread position:
               472-653
               

               Cow position:
               chr9:9516927-9516757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               38, 77
               

               Conread position:
               473-625
               

               Cow position:
               chr9:24887027-24887176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               38, 81
               

               Conread position:
               474-627
               

               Cow position:
               chr9:33114162-33114318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               476-625
               

               Cow position:
               chr9:41282837-41282985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               36, 78
               

               Conread position:
               476-625
               

               Cow position:
               chr9:59998205-59998063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               36, 55
               

               Conread position:
               477-562
               

               Cow position:
               chr9:42669846-42669761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               86
               

               Alignm identity:
               75
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               477-621
               

               Cow position:
               chr9:64302806-64302665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               35, 77
               

               Conread position:
               477-625
               

               Cow position:
               chr9:7543431-7543293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               477-625
               

               Cow position:
               chr9:29091596-29091743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               35, 79
               

               Conread position:
               477-625
               

               Cow position:
               chr9:34264909-34265065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               477-625
               

               Cow position:
               chr9:36627948-36628088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               35, 68
               

               Conread position:
               477-625
               

               Cow position:
               chr9:38941611-38941462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               32, 90
               

               Conread position:
               477-625
               

               Cow position:
               chr9:45369358-45369222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               477-625
               

               Cow position:
               chr9:55807460-55807601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 84
               

               Conread position:
               477-625
               

               Cow position:
               chr9:61302829-61302970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               34, 69
               

               Conread position:
               477-627
               

               Cow position:
               chr9:53496937-53496779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               35, 119
               

               Conread position:
               480-610
               

               Cow position:
               chr9:15939502-15939369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               31, 106
               

               Conread position:
               480-616
               

               Cow position:
               chr9:34399499-34399632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               32, 75
               

               Conread position:
               480-621
               

               Cow position:
               chr9:45740315-45740176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               32, 76
               

               Conread position:
               480-625
               

               Cow position:
               chr9:9686589-9686442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               78, 36
               

               Conread position:
               480-625
               

               Cow position:
               chr9:12773523-12773660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               28, 65
               

               Conread position:
               480-625
               

               Cow position:
               chr9:13205734-13205596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               480-625
               

               Cow position:
               chr9:27345760-27345614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               29, 80
               

               Conread position:
               480-625
               

               Cow position:
               chr9:40603496-40603638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               32, 76
               

               Conread position:
               480-625
               

               Cow position:
               chr9:52267933-52267785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               480-625
               

               Cow position:
               chr9:54598502-54598643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               480-627
               

               Cow position:
               chr9:53390377-53390230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               35, 64
               

               Conread position:
               480-630
               

               Cow position:
               chr9:6118602-6118460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               480-653
               

               Cow position:
               chr9:48017938-48017765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 73
               

               Conread position:
               481-593
               

               Cow position:
               chr9:32676507-32676622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               481-625
               

               Cow position:
               chr9:1751159-1751308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               481-625
               

               Cow position:
               chr9:8535688-8535837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               89, 35
               

               Conread position:
               481-625
               

               Cow position:
               chr9:8629082-8628947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 65
               

               Conread position:
               481-625
               

               Cow position:
               chr9:9443772-9443631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 26
               

               Conread position:
               481-625
               

               Cow position:
               chr9:17840849-17840708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               31, 72
               

               Conread position:
               481-625
               

               Cow position:
               chr9:20828734-20828876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 64
               

               Conread position:
               481-625
               

               Cow position:
               chr9:21460323-21460181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               31, 44
               

               Conread position:
               481-625
               

               Cow position:
               chr9:34375097-34374954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               31, 87
               

               Conread position:
               481-625
               

               Cow position:
               chr9:37198957-37199097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               31, 65
               

               Conread position:
               481-625
               

               Cow position:
               chr9:41644923-41644780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 74
               

               Conread position:
               481-625
               

               Cow position:
               chr9:50310933-50310790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               31, 83
               

               Conread position:
               481-625
               

               Cow position:
               chr9:57131328-57131465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               31, 63
               

               Conread position:
               481-627
               

               Cow position:
               chr9:61022449-61022595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               9, 75
               

               Conread position:
               481-629
               

               Cow position:
               chr9:9985023-9985163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               481-630
               

               Cow position:
               chr9:43757374-43757512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               481-632
               

               Cow position:
               chr9:32089222-32089365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               481-632
               

               Cow position:
               chr9:40984334-40984482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               31, 65
               

               Conread position:
               481-634
               

               Cow position:
               chr9:34024529-34024677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               31, 84
               

               Conread position:
               481-635
               

               Cow position:
               chr9:12337730-12337881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 64
               

               Conread position:
               482-625
               

               Cow position:
               chr9:3410361-3410497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               68, 6
               

               Conread position:
               482-625
               

               Cow position:
               chr9:60395218-60395078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               30, 70
               

               Conread position:
               482-628
               

               Cow position:
               chr9:33201217-33201073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 64
               

               Conread position:
               483-625
               

               Cow position:
               chr9:2037268-2037411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               29, 96
               

               Conread position:
               483-625
               

               Cow position:
               chr9:34743168-34743031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               28, 62
               

               Conread position:
               483-636
               

               Cow position:
               chr9:38792847-38792996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               29, 62
               

               Conread position:
               483-665
               

               Cow position:
               chr9:16300742-16300557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               484-625
               

               Cow position:
               chr9:26394515-26394379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               28, 62
               

               Conread position:
               485-621
               

               Cow position:
               chr9:9243378-9243517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               485-621
               

               Cow position:
               chr9:11873461-11873338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               485-621
               

               Cow position:
               chr9:36491070-36490935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               27, 61
               

               Conread position:
               485-623
               

               Cow position:
               chr9:36634338-36634475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 82
               

               Conread position:
               485-625
               

               Cow position:
               chr9:6192623-6192490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               27, 61
               

               Conread position:
               485-625
               

               Cow position:
               chr9:11098617-11098482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               27, 74
               

               Conread position:
               485-625
               

               Cow position:
               chr9:35167003-35167146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               485-625
               

               Cow position:
               chr9:48901001-48900866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               485-629
               

               Cow position:
               chr9:43159589-43159726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               30, 69
               

               Conread position:
               486-621
               

               Cow position:
               chr9:10144646-10144509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               63, 19
               

               Conread position:
               486-621
               

               Cow position:
               chr9:34707475-34707345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 69
               

               Conread position:
               486-625
               

               Cow position:
               chr9:33822952-33823088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               26, 57
               

               Conread position:
               487-625
               

               Cow position:
               chr9:33219121-33218979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 77
               

               Conread position:
               487-630
               

               Cow position:
               chr9:30123766-30123904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 57
               

               Conread position:
               487-642
               

               Cow position:
               chr9:4244260-4244415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 59
               

               Conread position:
               493-625
               

               Cow position:
               chr9:1712866-1712736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 52
               

               Conread position:
               493-625
               

               Cow position:
               chr9:11209611-11209474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 96
               

               Conread position:
               493-625
               

               Cow position:
               chr9:22165875-22165743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               19, 80
               

               Conread position:
               493-630
               

               Cow position:
               chr9:52998536-52998405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               17, 74
               

               Conread position:
               497-634
               

               Cow position:
               chr9:33120042-33119910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               500-625
               

               Cow position:
               chr9:42482752-42482881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               10, 89
               

               Conread position:
               508-624
               

               Cow position:
               chr9:64310919-64310807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               45, 0
               
Show alignments to all cow chromosomes.