Cow genome map

Conread name: Pig3-SRG8008F14

Conread position: 8-162
Cow position: chr11:48281280-48281435 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 139
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 487-616
Cow position: chr11:32584871-32585002 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 11, 40

Conread position: 487-649
Cow position: chr11:2084200-2084360 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 154, 11

Conread position: 488-618
Cow position: chr11:53778671-53778803 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 488-641
Cow position: chr11:25968800-25968648 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 488-649
Cow position: chr11:32800680-32800841 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 491-636
Cow position: chr11:26057593-26057446 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 492-640
Cow position: chr11:15772655-15772509 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 493-617
Cow position: chr11:63475613-63475489 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 36

Conread position: 493-626
Cow position: chr11:33369210-33369342 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 493-626
Cow position: chr11:68592077-68592209 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 127, 0

Conread position: 493-627
Cow position: chr11:65939803-65939671 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 493-636
Cow position: chr11:35733024-35732883 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 493-636
Cow position: chr11:62102388-62102245 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 493-639
Cow position: chr11:16314932-16315077 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 127, 0

Conread position: 493-640
Cow position: chr11:80370172-80370316 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 493-642
Cow position: chr11:34968555-34968406 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 493-644
Cow position: chr11:76896315-76896164 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 493-652
Cow position: chr11:84385579-84385419 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 90

Conread position: 493-653
Cow position: chr11:46884433-46884592 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 119, 0

Conread position: 493-659
Cow position: chr11:30708561-30708727 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 128

Conread position: 494-618
Cow position: chr11:18119562-18119685 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 495-628
Cow position: chr11:66188255-66188128 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 495-639
Cow position: chr11:62742584-62742443 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 123, 40

Conread position: 495-653
Cow position: chr11:18777538-18777373 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 495-654
Cow position: chr11:63435582-63435739 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 148, 0

Conread position: 496-608
Cow position: chr11:60720393-60720281 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 496-609
Cow position: chr11:2835921-2836034 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 496-617
Cow position: chr11:63407756-63407876 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 496-624
Cow position: chr11:69035221-69035348 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 496-625
Cow position: chr11:34644718-34644847 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 114

Conread position: 496-633
Cow position: chr11:42084613-42084474 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 496-639
Cow position: chr11:24551451-24551594 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 136

Conread position: 496-645
Cow position: chr11:42016577-42016431 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 496-652
Cow position: chr11:87172014-87171863 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 497-636
Cow position: chr11:83042179-83042040 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 124

Conread position: 497-653
Cow position: chr11:65431583-65431735 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 499-610
Cow position: chr11:21173372-21173262 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 499-610
Cow position: chr11:67417874-67417984 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 499-627
Cow position: chr11:4436399-4436526 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 110, 76

Conread position: 499-627
Cow position: chr11:70273526-70273654 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 110, 92

Conread position: 499-639
Cow position: chr11:35924127-35924265 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 502-636
Cow position: chr11:33271499-33271630 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 502-653
Cow position: chr11:36182764-36182914 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 119, 7

Conread position: 502-654
Cow position: chr11:12555237-12555088 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 503-618
Cow position: chr11:18924815-18924930 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 503-627
Cow position: chr11:50472386-50472510 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 505-637
Cow position: chr11:62889822-62889690 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 505-639
Cow position: chr11:36361571-36361437 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 505-641
Cow position: chr11:21637530-21637395 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 0

Conread position: 505-648
Cow position: chr11:41278257-41278401 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 505-653
Cow position: chr11:21590457-21590608 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 116

Conread position: 506-627
Cow position: chr11:51683288-51683408 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 506-639
Cow position: chr11:17889656-17889523 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 506-641
Cow position: chr11:8670088-8670223 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 509-642
Cow position: chr11:55636151-55636018 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 525-656
Cow position: chr11:84400006-84399873 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 12, 116

Conread position: 534-652
Cow position: chr11:77559444-77559326 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 82, 111

Show alignments to all cow chromosomes.