Cow genome map
| Conread name: | Pig3-SRG8008F14 |
| Conread position: | 471-633 |
| Cow position: | chr5:43434924-43434762 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 9, 150 |
| Conread position: | 476-631 |
| Cow position: | chr5:59517170-59517016 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 133, 13 |
| Conread position: | 477-659 |
| Cow position: | chr5:62543929-62544103 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 488-610 |
| Cow position: | chr5:30035165-30035287 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 488-636 |
| Cow position: | chr5:53055463-53055315 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-618 |
| Cow position: | chr5:34347634-34347507 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 492-652 |
| Cow position: | chr5:51012102-51012259 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 493-610 |
| Cow position: | chr5:53980651-53980534 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 493-617 |
| Cow position: | chr5:55756312-55756188 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 493-625 |
| Cow position: | chr5:44196826-44196697 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 493-626 |
| Cow position: | chr5:57526826-57526693 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 493-627 |
| Cow position: | chr5:43858317-43858183 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 493-629 |
| Cow position: | chr5:19052689-19052555 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 493-629 |
| Cow position: | chr5:50703946-50703811 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 493-635 |
| Cow position: | chr5:7012747-7012606 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 493-639 |
| Cow position: | chr5:52001520-52001378 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 493-642 |
| Cow position: | chr5:41935554-41935403 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 493-644 |
| Cow position: | chr5:35247007-35246856 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 104, 128 |
| Conread position: | 493-648 |
| Cow position: | chr5:35235586-35235434 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 493-650 |
| Cow position: | chr5:4280551-4280698 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 494-627 |
| Cow position: | chr5:16185482-16185615 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 494-647 |
| Cow position: | chr5:56624413-56624259 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 494-651 |
| Cow position: | chr5:24108956-24108800 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 494-651 |
| Cow position: | chr5:49821532-49821691 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 494-653 |
| Cow position: | chr5:43604243-43604400 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 496-621 |
| Cow position: | chr5:17987789-17987664 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 496-626 |
| Cow position: | chr5:56428468-56428338 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 496-627 |
| Cow position: | chr5:15413202-15413334 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 496-627 |
| Cow position: | chr5:62996063-62996193 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 496-637 |
| Cow position: | chr5:55783857-55783715 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 496-639 |
| Cow position: | chr5:60514923-60514778 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 496-657 |
| Cow position: | chr5:57399147-57398987 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 496-665 |
| Cow position: | chr5:61049438-61049605 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 140, 124 |
| Conread position: | 498-624 |
| Cow position: | chr5:32672727-32672601 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 499-618 |
| Cow position: | chr5:47870943-47870828 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 499-626 |
| Cow position: | chr5:42064314-42064440 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 502-618 |
| Cow position: | chr5:74690142-74690026 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 502-626 |
| Cow position: | chr5:39937227-39937348 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 502-627 |
| Cow position: | chr5:20407363-20407239 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 19, 30 |
| Conread position: | 505-614 |
| Cow position: | chr5:29256594-29256486 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 505-618 |
| Cow position: | chr5:54712955-54712842 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 505-625 |
| Cow position: | chr5:13471223-13471342 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 505-626 |
| Cow position: | chr5:45337306-45337186 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 505-659 |
| Cow position: | chr5:57447551-57447396 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 114, 130 |
| Conread position: | 506-618 |
| Cow position: | chr5:45854613-45854727 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 508-622 |
| Cow position: | chr5:30247409-30247296 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 108, 0 |
Show alignments to all cow chromosomes.