Cow genome map

Conread name: Pig3-SRG8014D21

Conread position: 209-559
Cow position: chr11:439641-439988 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 29

Conread position: 233-456
Cow position: chr11:38874401-38874633 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 9, 39

Conread position: 233-503
Cow position: chr11:62155639-62155355 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 216
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 9, 210

Conread position: 233-614
Cow position: chr11:67747285-67746891 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 10

Conread position: 236-515
Cow position: chr11:67804750-67804465 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 76, 20

Conread position: 237-623
Cow position: chr11:58588343-58587948 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 48

Conread position: 240-504
Cow position: chr11:48697441-48697171 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 73, 45

Conread position: 240-515
Cow position: chr11:14308632-14308351 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 185
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 73, 244

Conread position: 240-620
Cow position: chr11:40485942-40486313 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 268
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 47, 27

Conread position: 241-449
Cow position: chr11:34144922-34145138 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 40

Conread position: 241-451
Cow position: chr11:18373067-18372855 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 25

Conread position: 241-453
Cow position: chr11:19593810-19593593 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 59

Conread position: 241-462
Cow position: chr11:18341048-18341273 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 72, 42

Conread position: 241-467
Cow position: chr11:62239736-62239510 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 5

Conread position: 241-475
Cow position: chr11:2084135-2083900 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 67, 48

Conread position: 241-475
Cow position: chr11:36112415-36112169 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 41

Conread position: 241-485
Cow position: chr11:42044000-42044244 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 117, 48

Conread position: 241-486
Cow position: chr11:56728941-56728688 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 72, 48

Conread position: 241-487
Cow position: chr11:63516819-63516563 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 72, 43

Conread position: 241-501
Cow position: chr11:8105777-8105509 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 35, 0

Conread position: 241-516
Cow position: chr11:1362476-1362770 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 241-522
Cow position: chr11:13191217-13190927 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 70, 48

Conread position: 241-523
Cow position: chr11:3720247-3719958 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 71, 52

Conread position: 241-543
Cow position: chr11:287344-287647 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 70, 41

Conread position: 241-543
Cow position: chr11:60301969-60302271 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 72, 42

Conread position: 241-553
Cow position: chr11:68909854-68910176 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 45

Conread position: 241-555
Cow position: chr11:80761385-80761702 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 71, 56

Conread position: 241-582
Cow position: chr11:26483704-26483369 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 41

Conread position: 241-621
Cow position: chr11:6835526-6835152 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 280
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 51, 279

Conread position: 241-621
Cow position: chr11:30638958-30639324 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 266
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 97, 41

Conread position: 241-634
Cow position: chr11:27939478-27939081 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 48

Conread position: 241-635
Cow position: chr11:17112640-17113033 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 46

Conread position: 241-638
Cow position: chr11:1380667-1380285 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 48

Conread position: 241-638
Cow position: chr11:10076760-10076365 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 41

Conread position: 241-638
Cow position: chr11:33293787-33294199 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 48

Conread position: 241-638
Cow position: chr11:33349709-33350109 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 48

Conread position: 241-638
Cow position: chr11:50235984-50236378 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 71

Conread position: 241-638
Cow position: chr11:61203157-61202745 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 48

Conread position: 241-638
Cow position: chr11:67931493-67931885 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 287
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 21, 35

Conread position: 241-642
Cow position: chr11:84385645-84386048 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 40

Conread position: 242-513
Cow position: chr11:58102784-58103060 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 71, 43

Conread position: 243-496
Cow position: chr11:19247209-19247464 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 100, 39

Conread position: 243-634
Cow position: chr11:27386349-27386745 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 161

Conread position: 249-551
Cow position: chr11:36848909-36848621 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 44

Conread position: 249-559
Cow position: chr11:70382706-70383024 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 40

Conread position: 249-611
Cow position: chr11:37974912-37974542 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 263

Conread position: 249-638
Cow position: chr11:30165494-30165091 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 250-621
Cow position: chr11:50152830-50153209 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 40

Conread position: 250-638
Cow position: chr11:55117453-55117064 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 79

Conread position: 251-509
Cow position: chr11:45631778-45632046 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 62, 38

Conread position: 252-449
Cow position: chr11:2811749-2811945 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 32

Conread position: 252-471
Cow position: chr11:62808671-62808892 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 30

Conread position: 252-496
Cow position: chr11:45898073-45898324 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 61, 32

Conread position: 252-503
Cow position: chr11:377661-377926 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 198
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 55, 45

Conread position: 252-506
Cow position: chr11:75748415-75748157 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 24

Conread position: 252-515
Cow position: chr11:9221745-9222013 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 61, 33

Conread position: 252-515
Cow position: chr11:48474684-48474421 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 34

Conread position: 252-516
Cow position: chr11:18484188-18484448 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 93, 63

Conread position: 252-516
Cow position: chr11:21844151-21844421 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 59, 112

Conread position: 252-516
Cow position: chr11:83066478-83066207 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 59, 114

Conread position: 252-539
Cow position: chr11:25320037-25319742 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 59, 122

Conread position: 252-582
Cow position: chr11:35874022-35874325 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 40, 32

Conread position: 252-621
Cow position: chr11:41159-40789 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 30

Conread position: 252-621
Cow position: chr11:48272181-48271809 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 113

Conread position: 252-624
Cow position: chr11:49152930-49152545 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 41

Conread position: 252-634
Cow position: chr11:7590173-7589787 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 266
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 61, 30

Conread position: 252-636
Cow position: chr11:65409172-65409565 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 37

Conread position: 252-637
Cow position: chr11:43430473-43430868 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 104

Conread position: 252-638
Cow position: chr11:43360796-43361199 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 302
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 29, 248

Conread position: 252-638
Cow position: chr11:44234336-44233957 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 207

Conread position: 253-502
Cow position: chr11:79728690-79728948 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 7, 18

Conread position: 253-506
Cow position: chr11:34829799-34830058 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 58, 112

Conread position: 253-522
Cow position: chr11:21497508-21497247 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 68

Conread position: 254-459
Cow position: chr11:21728297-21728499 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 43

Conread position: 254-464
Cow position: chr11:65762618-65762833 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 157

Conread position: 254-506
Cow position: chr11:45646614-45646869 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 31

Conread position: 254-530
Cow position: chr11:65157430-65157712 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 55, 119

Conread position: 254-559
Cow position: chr11:73924584-73924888 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 34

Conread position: 254-612
Cow position: chr11:68206865-68207232 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 17

Conread position: 255-601
Cow position: chr11:2092314-2091974 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 83

Conread position: 256-618
Cow position: chr11:71846369-71846738 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 24

Conread position: 257-516
Cow position: chr11:48932605-48932871 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 14, 30

Conread position: 258-460
Cow position: chr11:33348205-33348417 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 260-461
Cow position: chr11:25620424-25620629 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 140
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 263-512
Cow position: chr11:81300633-81300897 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 264-489
Cow position: chr11:36647329-36647099 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 44

Conread position: 267-637
Cow position: chr11:29946963-29947346 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 9

Conread position: 267-638
Cow position: chr11:77758791-77759166 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 22

Conread position: 269-614
Cow position: chr11:3833390-3833734 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 41

Conread position: 270-632
Cow position: chr11:44642323-44642684 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 101

Conread position: 272-620
Cow position: chr11:40818675-40819036 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 272-638
Cow position: chr11:61454566-61454944 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 14

Conread position: 273-499
Cow position: chr11:50951517-50951279 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 273-638
Cow position: chr11:952229-951865 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 10

Conread position: 277-506
Cow position: chr11:30475961-30475721 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 33, 212

Conread position: 277-545
Cow position: chr11:41986085-41986359 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 36, 248

Conread position: 278-607
Cow position: chr11:77772734-77773062 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 211
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 43, 9

Conread position: 278-621
Cow position: chr11:81174847-81174498 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 19

Conread position: 283-496
Cow position: chr11:84924142-84924364 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 205

Conread position: 284-515
Cow position: chr11:19508247-19508009 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 27, 89

Conread position: 285-511
Cow position: chr11:15125030-15125263 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 285-516
Cow position: chr11:57111356-57111596 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 136

Conread position: 285-555
Cow position: chr11:30934373-30934094 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 26, 175

Conread position: 285-613
Cow position: chr11:58990454-58990125 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 58

Conread position: 285-636
Cow position: chr11:48901130-48901477 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 78

Conread position: 285-639
Cow position: chr11:13040216-13040588 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 262
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 47, 71

Conread position: 286-486
Cow position: chr11:41426866-41426655 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 289-515
Cow position: chr11:1668623-1668387 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 289-582
Cow position: chr11:54334280-54333980 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 289-638
Cow position: chr11:76114598-76114244 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 322

Conread position: 294-623
Cow position: chr11:35363440-35363102 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 195

Conread position: 295-473
Cow position: chr11:47899220-47899031 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 78

Conread position: 295-516
Cow position: chr11:25165383-25165157 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 71

Conread position: 295-583
Cow position: chr11:84890809-84891097 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 70

Conread position: 295-638
Cow position: chr11:67951024-67951356 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 16, 73

Conread position: 296-505
Cow position: chr11:71309588-71309806 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 28, 0

Conread position: 296-517
Cow position: chr11:9213913-9214133 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 145
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 296-623
Cow position: chr11:14941654-14941998 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 229
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 23

Conread position: 296-638
Cow position: chr11:1485926-1486279 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 220

Conread position: 297-621
Cow position: chr11:46413511-46413178 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 220
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 22

Conread position: 300-637
Cow position: chr11:25337012-25336663 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 182

Conread position: 310-460
Cow position: chr11:31417354-31417203 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 123

Conread position: 310-621
Cow position: chr11:37118412-37118091 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 152

Conread position: 311-636
Cow position: chr11:40250687-40251008 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 15

Conread position: 316-532
Cow position: chr11:50112105-50111889 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 174
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 42, 79

Conread position: 316-637
Cow position: chr11:29916448-29916139 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 35, 77

Conread position: 318-621
Cow position: chr11:35881825-35881517 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 44

Conread position: 318-638
Cow position: chr11:64044156-64043840 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 20, 43

Conread position: 319-620
Cow position: chr11:25807841-25808147 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 218
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 17, 204

Conread position: 319-636
Cow position: chr11:84775020-84774710 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 84

Conread position: 327-501
Cow position: chr11:41315420-41315587 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 327-537
Cow position: chr11:80809743-80809954 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 30

Conread position: 327-623
Cow position: chr11:35919875-35920172 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 210
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 8

Conread position: 327-646
Cow position: chr11:22103656-22103345 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 8

Conread position: 330-583
Cow position: chr11:72870828-72870561 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 12, 192

Conread position: 342-639
Cow position: chr11:3998687-3998992 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 11, 173

Conread position: 342-639
Cow position: chr11:36459705-36459405 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 12, 168

Conread position: 343-638
Cow position: chr11:75510345-75510662 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 23

Conread position: 344-642
Cow position: chr11:78480684-78480385 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 21

Conread position: 345-578
Cow position: chr11:53925648-53925413 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 85, 167

Conread position: 345-613
Cow position: chr11:68631807-68632080 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 8, 75

Conread position: 345-640
Cow position: chr11:68131222-68130924 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 84

Conread position: 350-621
Cow position: chr11:13942691-13942418 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 64, 131

Conread position: 350-635
Cow position: chr11:81337090-81337372 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 169

Conread position: 350-636
Cow position: chr11:18066966-18067249 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 264, 72

Conread position: 350-638
Cow position: chr11:32067159-32067440 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 70

Conread position: 353-540
Cow position: chr11:70205919-70205739 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 166, 123

Conread position: 357-638
Cow position: chr11:56751513-56751789 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 215
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 40, 81

Conread position: 358-527
Cow position: chr11:58022745-58022909 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 106, 0

Conread position: 362-530
Cow position: chr11:10545859-10545689 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 119

Conread position: 455-638
Cow position: chr11:13067741-13067926 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 57

Conread position: 455-638
Cow position: chr11:13162256-13162071 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 57

Show alignments to all cow chromosomes.