Cow genome map

Conread name: Pig3-SRG8014D21

Conread position: 197-621
Cow position: chr14:21018094-21018529 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 293
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 17, 6

Conread position: 223-534
Cow position: chr14:5835921-5836233 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 14

Conread position: 233-448
Cow position: chr14:8750095-8750319 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 10

Conread position: 233-504
Cow position: chr14:32452273-32452562 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 50

Conread position: 233-510
Cow position: chr14:35018729-35018449 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 18, 10

Conread position: 233-638
Cow position: chr14:24893794-24894191 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 52

Conread position: 237-635
Cow position: chr14:26448776-26449176 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 264
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 76, 29

Conread position: 239-537
Cow position: chr14:19814513-19814227 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 28

Conread position: 240-482
Cow position: chr14:17841260-17841009 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 73, 125

Conread position: 240-516
Cow position: chr14:44257955-44258228 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 70, 118

Conread position: 241-432
Cow position: chr14:14580902-14581094 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 41

Conread position: 241-449
Cow position: chr14:14417464-14417260 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 28

Conread position: 241-510
Cow position: chr14:35700457-35700738 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 72, 29

Conread position: 241-581
Cow position: chr14:37103243-37103575 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 56

Conread position: 241-602
Cow position: chr14:33326362-33325996 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 41

Conread position: 241-621
Cow position: chr14:8101823-8102194 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 259
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 72, 43

Conread position: 241-635
Cow position: chr14:27312456-27312869 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 200

Conread position: 241-636
Cow position: chr14:19863400-19863015 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 41

Conread position: 241-638
Cow position: chr14:13006535-13006938 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 188

Conread position: 241-638
Cow position: chr14:13385401-13385807 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 53

Conread position: 241-638
Cow position: chr14:21964154-21964550 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 41

Conread position: 241-638
Cow position: chr14:28795705-28796103 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 50

Conread position: 243-511
Cow position: chr14:33714645-33714380 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 201
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 8, 25

Conread position: 245-638
Cow position: chr14:47609545-47609172 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 287
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 87, 44

Conread position: 252-482
Cow position: chr14:24796389-24796145 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 41

Conread position: 252-483
Cow position: chr14:19129550-19129791 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 186
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 59, 150

Conread position: 252-501
Cow position: chr14:11820076-11819826 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 59, 32

Conread position: 252-511
Cow position: chr14:47591876-47591613 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 176
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 20

Conread position: 252-537
Cow position: chr14:9308273-9308558 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 65, 37

Conread position: 252-559
Cow position: chr14:38355227-38355543 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 60, 107

Conread position: 252-621
Cow position: chr14:6735819-6735454 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 153

Conread position: 252-623
Cow position: chr14:45605132-45605508 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 113

Conread position: 252-635
Cow position: chr14:24416926-24417315 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 107

Conread position: 252-635
Cow position: chr14:27848238-27848630 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 114

Conread position: 252-636
Cow position: chr14:13809978-13810389 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 287
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 61, 158

Conread position: 252-638
Cow position: chr14:41180668-41180287 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 270
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 58, 97

Conread position: 252-642
Cow position: chr14:46490215-46489817 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 32

Conread position: 254-515
Cow position: chr14:15032801-15033068 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 57, 17

Conread position: 254-621
Cow position: chr14:27591911-27591532 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 262
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 59, 110

Conread position: 254-638
Cow position: chr14:20640584-20640187 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 264

Conread position: 256-620
Cow position: chr14:10912918-10912567 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 20

Conread position: 257-463
Cow position: chr14:33309460-33309249 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 14

Conread position: 258-621
Cow position: chr14:41210898-41211286 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 117

Conread position: 260-574
Cow position: chr14:34083096-34082790 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 37

Conread position: 267-638
Cow position: chr14:19189099-19189472 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 71

Conread position: 268-635
Cow position: chr14:40737611-40737231 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 252
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 21

Conread position: 270-621
Cow position: chr14:39807398-39807045 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 246
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 43, 12

Conread position: 272-505
Cow position: chr14:35712118-35711878 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 165

Conread position: 274-562
Cow position: chr14:39926264-39926542 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 74

Conread position: 275-523
Cow position: chr14:19105945-19106190 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 76, 61

Conread position: 275-621
Cow position: chr14:25779161-25779512 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 42

Conread position: 276-515
Cow position: chr14:12856670-12856906 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 69, 42

Conread position: 285-488
Cow position: chr14:47672813-47672598 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 166

Conread position: 285-513
Cow position: chr14:11615144-11614909 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 76

Conread position: 285-621
Cow position: chr14:445493-445804 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 51

Conread position: 285-638
Cow position: chr14:28987769-28988124 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 138

Conread position: 291-638
Cow position: chr14:5502082-5501718 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 231

Conread position: 292-642
Cow position: chr14:8784265-8784613 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 72

Conread position: 294-565
Cow position: chr14:9901261-9901531 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 72

Conread position: 295-511
Cow position: chr14:20932698-20932926 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 296-573
Cow position: chr14:17013589-17013876 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 213
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 16, 154

Conread position: 296-635
Cow position: chr14:34221140-34221485 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 240
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 17, 215

Conread position: 297-503
Cow position: chr14:11810485-11810270 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 136

Conread position: 297-521
Cow position: chr14:19996402-19996639 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 299-606
Cow position: chr14:34020775-34021088 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 225
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 20, 73

Conread position: 305-534
Cow position: chr14:37108811-37108582 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 46, 131

Conread position: 308-638
Cow position: chr14:25885610-25885935 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 11

Conread position: 310-510
Cow position: chr14:14466375-14466172 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 30, 47

Conread position: 310-516
Cow position: chr14:36709222-36709435 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 38, 11

Conread position: 310-563
Cow position: chr14:46965661-46965918 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 60

Conread position: 316-506
Cow position: chr14:34330652-34330842 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 32, 87

Conread position: 318-468
Cow position: chr14:24840066-24839913 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 27, 141

Conread position: 318-639
Cow position: chr14:1727958-1727629 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 195

Conread position: 319-635
Cow position: chr14:20666913-20666590 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 43

Conread position: 319-636
Cow position: chr14:36440023-36440334 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 24, 35

Conread position: 319-639
Cow position: chr14:9875504-9875821 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 224
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 94

Conread position: 323-638
Cow position: chr14:27791642-27791968 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 47

Conread position: 325-511
Cow position: chr14:29606116-29605929 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 22, 98

Conread position: 341-639
Cow position: chr14:12739264-12739565 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 12, 172

Conread position: 342-506
Cow position: chr14:34329516-34329356 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 57

Conread position: 342-639
Cow position: chr14:13473652-13473943 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 11, 46

Conread position: 347-577
Cow position: chr14:37151508-37151268 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 55, 178

Conread position: 350-583
Cow position: chr14:8989451-8989216 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 7

Conread position: 359-611
Cow position: chr14:45584045-45583792 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 121, 158

Conread position: 359-638
Cow position: chr14:19513221-19512954 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 128

Conread position: 361-562
Cow position: chr14:36585801-36585603 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 155, 0

Conread position: 361-635
Cow position: chr14:25993533-25993262 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 223, 143

Conread position: 362-607
Cow position: chr14:7620108-7619859 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 74

Conread position: 375-638
Cow position: chr14:2037764-2037509 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 102, 77

Conread position: 376-634
Cow position: chr14:34395495-34395241 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 99

Show alignments to all cow chromosomes.