Cow genome map


           Conread name:
           Pig3-SRG8014D21
        

               Conread position:
               197-621
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               293
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               17, 6
               

               Conread position:
               223-534
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               233-448
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               19, 10
               

               Conread position:
               233-504
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               9, 50
               

               Conread position:
               233-510
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               18, 10
               

               Conread position:
               233-638
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 52
               

               Conread position:
               237-635
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               76, 29
               

               Conread position:
               239-537
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               58, 28
               

               Conread position:
               240-482
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               73, 125
               

               Conread position:
               240-516
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               70, 118
               

               Conread position:
               241-432
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 41
               

               Conread position:
               241-449
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               21, 28
               

               Conread position:
               241-510
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               72, 29
               

               Conread position:
               241-581
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 56
               

               Conread position:
               241-602
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 41
               

               Conread position:
               241-621
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               72, 43
               

               Conread position:
               241-635
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 200
               

               Conread position:
               241-636
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 41
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 188
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 53
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 41
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 50
               

               Conread position:
               243-511
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               245-638
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               287
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               87, 44
               

               Conread position:
               252-482
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 41
               

               Conread position:
               252-483
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               186
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               59, 150
               

               Conread position:
               252-501
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               59, 32
               

               Conread position:
               252-511
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               252-537
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               65, 37
               

               Conread position:
               252-559
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               60, 107
               

               Conread position:
               252-621
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 153
               

               Conread position:
               252-623
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 113
               

               Conread position:
               252-635
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 107
               

               Conread position:
               252-635
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 114
               

               Conread position:
               252-636
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               287
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               61, 158
               

               Conread position:
               252-638
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               270
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               58, 97
               

               Conread position:
               252-642
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 32
               

               Conread position:
               254-515
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               57, 17
               

               Conread position:
               254-621
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               262
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               59, 110
               

               Conread position:
               254-638
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 264
               

               Conread position:
               256-620
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 20
               

               Conread position:
               257-463
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               56, 14
               

               Conread position:
               258-621
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 117
               

               Conread position:
               260-574
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 37
               

               Conread position:
               267-638
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 71
               

               Conread position:
               268-635
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 21
               

               Conread position:
               270-621
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               246
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               272-505
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               45, 165
               

               Conread position:
               274-562
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 74
               

               Conread position:
               275-523
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               76, 61
               

               Conread position:
               275-621
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 42
               

               Conread position:
               276-515
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               69, 42
               

               Conread position:
               285-488
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 166
               

               Conread position:
               285-513
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 76
               

               Conread position:
               285-621
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 51
               

               Conread position:
               285-638
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 138
               

               Conread position:
               291-638
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 231
               

               Conread position:
               292-642
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 72
               

               Conread position:
               294-565
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 72
               

               Conread position:
               295-511
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               296-573
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               213
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               16, 154
               

               Conread position:
               296-635
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               240
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               17, 215
               

               Conread position:
               297-503
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 136
               

               Conread position:
               297-521
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               299-606
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               20, 73
               

               Conread position:
               305-534
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               46, 131
               

               Conread position:
               308-638
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 11
               

               Conread position:
               310-510
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               30, 47
               

               Conread position:
               310-516
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               38, 11
               

               Conread position:
               310-563
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               316-506
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               32, 87
               

               Conread position:
               318-468
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               27, 141
               

               Conread position:
               318-639
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 195
               

               Conread position:
               319-635
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 43
               

               Conread position:
               319-636
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               24, 35
               

               Conread position:
               319-639
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               27, 94
               

               Conread position:
               323-638
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 47
               

               Conread position:
               325-511
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               22, 98
               

               Conread position:
               341-639
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               12, 172
               

               Conread position:
               342-506
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               11, 57
               

               Conread position:
               342-639
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               347-577
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               55, 178
               

               Conread position:
               350-583
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 7
               

               Conread position:
               359-611
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               121, 158
               

               Conread position:
               359-638
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 128
               

               Conread position:
               361-562
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               361-635
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               223, 143
               

               Conread position:
               362-607
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 74
               

               Conread position:
               375-638
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               102, 77
               

               Conread position:
               376-634
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 99
               
Show alignments to all cow chromosomes.