Cow genome map


           Conread name:
           Pig3-SRG8014D21
        

               Conread position:
               198-635
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               11, 91
               

               Conread position:
               205-516
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               220
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               107, 35
               

               Conread position:
               208-508
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               9, 77
               

               Conread position:
               233-620
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 134
               

               Conread position:
               236-514
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               17, 50
               

               Conread position:
               237-448
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               5, 136
               

               Conread position:
               237-635
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 81
               

               Conread position:
               237-638
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 6
               

               Conread position:
               239-635
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               260
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               42, 120
               

               Conread position:
               240-457
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 126
               

               Conread position:
               240-503
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               41, 24
               

               Conread position:
               240-591
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 125
               

               Conread position:
               240-621
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               73, 57
               

               Conread position:
               241-446
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               70, 40
               

               Conread position:
               241-458
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               72, 31
               

               Conread position:
               241-488
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               110, 74
               

               Conread position:
               241-488
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               72, 42
               

               Conread position:
               241-495
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               72, 26
               

               Conread position:
               241-504
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 44
               

               Conread position:
               241-511
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               39, 241
               

               Conread position:
               241-515
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               69, 43
               

               Conread position:
               241-583
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               263
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               51, 35
               

               Conread position:
               241-604
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 30
               

               Conread position:
               241-621
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 31
               

               Conread position:
               241-622
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 41
               

               Conread position:
               241-636
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 98
               

               Conread position:
               241-637
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 30
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 40
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 28
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 107
               

               Conread position:
               242-621
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               266
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               12, 188
               

               Conread position:
               247-475
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               66, 35
               

               Conread position:
               247-621
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               260
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               98, 77
               

               Conread position:
               249-636
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               290
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               63, 38
               

               Conread position:
               252-480
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               59, 42
               

               Conread position:
               252-501
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               61, 44
               

               Conread position:
               252-514
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               86, 64
               

               Conread position:
               252-516
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 114
               

               Conread position:
               252-566
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               234
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               31, 76
               

               Conread position:
               252-583
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 114
               

               Conread position:
               252-638
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 32
               

               Conread position:
               252-638
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 236
               

               Conread position:
               252-638
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 30
               

               Conread position:
               252-638
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 154
               

               Conread position:
               254-638
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 14
               

               Conread position:
               267-638
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               258
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               46, 303
               

               Conread position:
               270-515
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               40, 14
               

               Conread position:
               270-621
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 104
               

               Conread position:
               271-515
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               37, 26
               

               Conread position:
               272-513
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               40, 25
               

               Conread position:
               274-638
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 92
               

               Conread position:
               275-623
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               277-636
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 20
               

               Conread position:
               278-638
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               33, 11
               

               Conread position:
               294-504
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               49, 21
               

               Conread position:
               294-506
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               58, 41
               

               Conread position:
               294-635
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               296-456
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               296-543
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 215
               

               Conread position:
               296-600
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 73
               

               Conread position:
               296-635
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               17, 56
               

               Conread position:
               296-636
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 136
               

               Conread position:
               296-638
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 331
               

               Conread position:
               298-515
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               15, 67
               

               Conread position:
               300-621
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 341
               

               Conread position:
               310-598
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 114
               

               Conread position:
               310-598
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               311-491
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               316-643
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 38
               

               Conread position:
               318-638
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 44
               

               Conread position:
               318-640
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               27, 85
               

               Conread position:
               319-635
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               27, 125
               

               Conread position:
               319-635
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               183, 26
               

               Conread position:
               323-629
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 164
               

               Conread position:
               325-488
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               326-638
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 10
               

               Conread position:
               327-622
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               336-638
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 149
               

               Conread position:
               342-531
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               11, 166
               

               Conread position:
               342-636
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               342-638
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               11, 63
               

               Conread position:
               342-639
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               11, 171
               

               Conread position:
               343-564
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               26, 56
               

               Conread position:
               345-639
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               7, 138
               

               Conread position:
               357-507
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               52, 98
               

               Conread position:
               359-636
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               224, 66
               

               Conread position:
               361-505
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               361-516
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               361-638
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               216
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               40, 119
               

               Conread position:
               367-513
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 0
               
Show alignments to all cow chromosomes.