Cow genome map

Conread name: Pig3-SRG8014D21

Conread position: 198-635
Cow position: chr15:8630245-8629802 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 287
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 11, 91

Conread position: 205-516
Cow position: chr15:21893824-21894141 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 107, 35

Conread position: 208-508
Cow position: chr15:34140029-34140331 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 9, 77

Conread position: 233-620
Cow position: chr15:794950-794554 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 134

Conread position: 236-514
Cow position: chr15:39599514-39599795 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 17, 50

Conread position: 237-448
Cow position: chr15:4350528-4350309 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 136

Conread position: 237-635
Cow position: chr15:33976614-33976216 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 81

Conread position: 237-638
Cow position: chr15:15708039-15707639 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 6

Conread position: 239-635
Cow position: chr15:22713756-22713367 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 260
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 120

Conread position: 240-457
Cow position: chr15:11646413-11646189 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 126

Conread position: 240-503
Cow position: chr15:15215095-15215366 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 24

Conread position: 240-591
Cow position: chr15:13387155-13387514 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 125

Conread position: 240-621
Cow position: chr15:7962156-7962546 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 263
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 73, 57

Conread position: 241-446
Cow position: chr15:36773618-36773405 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 40

Conread position: 241-458
Cow position: chr15:26919195-26918972 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 72, 31

Conread position: 241-488
Cow position: chr15:4501066-4501311 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 110, 74

Conread position: 241-488
Cow position: chr15:5632766-5633003 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 72, 42

Conread position: 241-495
Cow position: chr15:31857671-31857930 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 72, 26

Conread position: 241-504
Cow position: chr15:22136763-22137030 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 44

Conread position: 241-511
Cow position: chr15:2953054-2952776 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 39, 241

Conread position: 241-515
Cow position: chr15:17100630-17100358 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 69, 43

Conread position: 241-583
Cow position: chr15:40999991-40999628 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 51, 35

Conread position: 241-604
Cow position: chr15:25585010-25584633 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 30

Conread position: 241-621
Cow position: chr15:5234921-5234542 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 31

Conread position: 241-622
Cow position: chr15:43626549-43626920 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 41

Conread position: 241-636
Cow position: chr15:363105-363491 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 98

Conread position: 241-637
Cow position: chr15:5498954-5498553 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 30

Conread position: 241-638
Cow position: chr15:42142939-42143329 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 40

Conread position: 241-638
Cow position: chr15:47274454-47274839 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 28

Conread position: 241-638
Cow position: chr15:47843171-47842788 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 107

Conread position: 242-621
Cow position: chr15:16603899-16604285 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 266
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 12, 188

Conread position: 247-475
Cow position: chr15:10088405-10088632 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 66, 35

Conread position: 247-621
Cow position: chr15:22531148-22531518 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 260
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 98, 77

Conread position: 249-636
Cow position: chr15:37381712-37382103 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 290
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 63, 38

Conread position: 252-480
Cow position: chr15:39598333-39598560 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 59, 42

Conread position: 252-501
Cow position: chr15:6586626-6586369 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 44

Conread position: 252-514
Cow position: chr15:16476648-16476386 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 86, 64

Conread position: 252-516
Cow position: chr15:40009563-40009291 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 114

Conread position: 252-566
Cow position: chr15:17084301-17084616 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 234
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 31, 76

Conread position: 252-583
Cow position: chr15:3700198-3699860 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 114

Conread position: 252-638
Cow position: chr15:1330012-1329626 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 32

Conread position: 252-638
Cow position: chr15:9871326-9870935 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 236

Conread position: 252-638
Cow position: chr15:22095215-22095590 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 30

Conread position: 252-638
Cow position: chr15:34207103-34206721 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 154

Conread position: 254-638
Cow position: chr15:50302276-50302682 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 14

Conread position: 267-638
Cow position: chr15:44209669-44210062 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 258
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 46, 303

Conread position: 270-515
Cow position: chr15:12316035-12316282 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 40, 14

Conread position: 270-621
Cow position: chr15:20370352-20370009 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 104

Conread position: 271-515
Cow position: chr15:38883259-38883515 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 195
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 37, 26

Conread position: 272-513
Cow position: chr15:19279979-19279738 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 25

Conread position: 274-638
Cow position: chr15:22532347-22532714 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 92

Conread position: 275-623
Cow position: chr15:16639896-16640251 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 10

Conread position: 277-636
Cow position: chr15:41583024-41583386 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 20

Conread position: 278-638
Cow position: chr15:23332761-23332384 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 266
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 33, 11

Conread position: 294-504
Cow position: chr15:39405867-39406081 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 174
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 49, 21

Conread position: 294-506
Cow position: chr15:29604577-29604366 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 58, 41

Conread position: 294-635
Cow position: chr15:25208633-25208292 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 45

Conread position: 296-456
Cow position: chr15:5071967-5071801 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 296-543
Cow position: chr15:24128782-24129031 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 215

Conread position: 296-600
Cow position: chr15:16543322-16543021 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 73

Conread position: 296-635
Cow position: chr15:4373607-4373952 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 17, 56

Conread position: 296-636
Cow position: chr15:19403112-19403453 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 136

Conread position: 296-638
Cow position: chr15:22168189-22168543 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 331

Conread position: 298-515
Cow position: chr15:14020606-14020829 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 67

Conread position: 300-621
Cow position: chr15:9062460-9062113 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 341

Conread position: 310-598
Cow position: chr15:4485289-4485581 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 114

Conread position: 310-598
Cow position: chr15:26896560-26896280 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 26

Conread position: 311-491
Cow position: chr15:26158467-26158284 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 59

Conread position: 316-643
Cow position: chr15:45245386-45245070 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 38

Conread position: 318-638
Cow position: chr15:14505582-14505907 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 44

Conread position: 318-640
Cow position: chr15:53342831-53342506 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 27, 85

Conread position: 319-635
Cow position: chr15:9072272-9071953 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 27, 125

Conread position: 319-635
Cow position: chr15:14322897-14322569 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 183, 26

Conread position: 323-629
Cow position: chr15:18284398-18284713 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 164

Conread position: 325-488
Cow position: chr15:36787467-36787639 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 326-638
Cow position: chr15:13669732-13669425 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 10

Conread position: 327-622
Cow position: chr15:23265381-23265094 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 213
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 28, 18

Conread position: 336-638
Cow position: chr15:29542169-29542477 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 149

Conread position: 342-531
Cow position: chr15:51831413-51831220 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 11, 166

Conread position: 342-636
Cow position: chr15:33605107-33605395 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 17

Conread position: 342-638
Cow position: chr15:18206328-18206039 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 217
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 11, 63

Conread position: 342-639
Cow position: chr15:15233761-15234063 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 11, 171

Conread position: 343-564
Cow position: chr15:34284175-34283945 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 26, 56

Conread position: 345-639
Cow position: chr15:20309131-20309438 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 7, 138

Conread position: 357-507
Cow position: chr15:29861558-29861710 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 52, 98

Conread position: 359-636
Cow position: chr15:53481650-53481919 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 224, 66

Conread position: 361-505
Cow position: chr15:13739-13595 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 104
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 361-516
Cow position: chr15:6657311-6657464 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 361-638
Cow position: chr15:12359449-12359734 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 40, 119

Conread position: 367-513
Cow position: chr15:169819-169960 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 0

Show alignments to all cow chromosomes.