Cow genome map
Conread name: | Pig3-SRG8014D21 |
Conread position: | 199-621 |
Cow position: | chr18:26937747-26937321 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 20 |
Conread position: | 209-638 |
Cow position: | chr18:22120879-22121303 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 31 |
Conread position: | 212-638 |
Cow position: | chr18:16044148-16044572 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 286 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 79, 21 |
Conread position: | 223-570 |
Cow position: | chr18:4078787-4078454 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 236 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 89, 15 |
Conread position: | 233-512 |
Cow position: | chr18:22214473-22214188 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 218 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 9, 50 |
Conread position: | 233-571 |
Cow position: | chr18:56159447-56159104 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 63 |
Conread position: | 233-583 |
Cow position: | chr18:45104456-45104814 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 10 |
Conread position: | 233-617 |
Cow position: | chr18:2608740-2609137 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 116 |
Conread position: | 235-515 |
Cow position: | chr18:4516012-4515726 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 186 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 75, 37 |
Conread position: | 237-598 |
Cow position: | chr18:29371847-29371483 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 45 |
Conread position: | 237-656 |
Cow position: | chr18:39001822-39002236 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 53 |
Conread position: | 240-445 |
Cow position: | chr18:219317-219101 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 159 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 240-488 |
Cow position: | chr18:2592187-2592447 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 192 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 26, 48 |
Conread position: | 241-431 |
Cow position: | chr18:18369383-18369578 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 142 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 70, 125 |
Conread position: | 241-450 |
Cow position: | chr18:14085440-14085224 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 151 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 39, 59 |
Conread position: | 241-485 |
Cow position: | chr18:48453664-48453422 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 174 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 105, 41 |
Conread position: | 241-488 |
Cow position: | chr18:3044425-3044156 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 190 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 40, 245 |
Conread position: | 241-502 |
Cow position: | chr18:25282577-25282843 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 196 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 72, 47 |
Conread position: | 241-510 |
Cow position: | chr18:42455045-42455316 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 199 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 57, 91 |
Conread position: | 241-515 |
Cow position: | chr18:20127129-20127403 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 191 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 21, 44 |
Conread position: | 241-529 |
Cow position: | chr18:26998859-26998548 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 220 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 72, 29 |
Conread position: | 241-606 |
Cow position: | chr18:55692792-55692430 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 108 |
Conread position: | 241-607 |
Cow position: | chr18:39662755-39662384 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 43 |
Conread position: | 241-621 |
Cow position: | chr18:10656414-10656041 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 72 |
Conread position: | 241-635 |
Cow position: | chr18:33606607-33606211 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 41 |
Conread position: | 241-638 |
Cow position: | chr18:2270528-2270926 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 5 |
Conread position: | 241-638 |
Cow position: | chr18:7956122-7955724 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 48 |
Conread position: | 241-638 |
Cow position: | chr18:7965208-7964808 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 44 |
Conread position: | 241-638 |
Cow position: | chr18:43283780-43284174 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 33 |
Conread position: | 241-638 |
Cow position: | chr18:47314304-47314721 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 394 |
Conread position: | 241-638 |
Cow position: | chr18:55552943-55552542 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 41 |
Conread position: | 243-501 |
Cow position: | chr18:35537256-35537516 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 195 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 70, 169 |
Conread position: | 245-496 |
Cow position: | chr18:24945833-24946093 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 184 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 67, 52 |
Conread position: | 247-638 |
Cow position: | chr18:4316282-4315876 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 36 |
Conread position: | 247-638 |
Cow position: | chr18:11618445-11618059 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 39 |
Conread position: | 249-515 |
Cow position: | chr18:20271051-20271321 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 193 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 62, 39 |
Conread position: | 250-638 |
Cow position: | chr18:6881385-6881752 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 279 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 10, 35 |
Conread position: | 252-448 |
Cow position: | chr18:48828809-48829021 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 150 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 252-475 |
Cow position: | chr18:35582132-35582363 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 166 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 58, 114 |
Conread position: | 252-512 |
Cow position: | chr18:55499037-55498769 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 197 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 28, 15 |
Conread position: | 252-582 |
Cow position: | chr18:10576070-10575746 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 37 |
Conread position: | 252-607 |
Cow position: | chr18:55505372-55505011 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 256 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 59, 19 |
Conread position: | 252-621 |
Cow position: | chr18:14815377-14815741 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 29 |
Conread position: | 252-621 |
Cow position: | chr18:21195376-21195745 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 87 |
Conread position: | 252-638 |
Cow position: | chr18:29356659-29357060 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 37 |
Conread position: | 252-638 |
Cow position: | chr18:51212149-51211743 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 31 |
Conread position: | 253-506 |
Cow position: | chr18:267851-268103 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 195 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 60, 31 |
Conread position: | 253-516 |
Cow position: | chr18:11166945-11166677 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 29 |
Conread position: | 253-635 |
Cow position: | chr18:16842095-16842492 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 272 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 53, 234 |
Conread position: | 254-491 |
Cow position: | chr18:30794392-30794157 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 172 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 33, 53 |
Conread position: | 254-635 |
Cow position: | chr18:33793666-33793284 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 13 |
Conread position: | 254-638 |
Cow position: | chr18:11322559-11322166 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 28 |
Conread position: | 254-638 |
Cow position: | chr18:29648747-29648366 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 64 |
Conread position: | 257-583 |
Cow position: | chr18:41271052-41270720 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 79 |
Conread position: | 270-637 |
Cow position: | chr18:55589539-55589896 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 84 |
Conread position: | 271-501 |
Cow position: | chr18:36098153-36097914 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 185 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 42, 106 |
Conread position: | 272-637 |
Cow position: | chr18:52635130-52635503 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 158 |
Conread position: | 276-618 |
Cow position: | chr18:7359689-7359339 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 245 |
Conread position: | 276-638 |
Cow position: | chr18:7487196-7486829 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 42 |
Conread position: | 285-512 |
Cow position: | chr18:13360000-13359764 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 176 |
Conread position: | 289-623 |
Cow position: | chr18:43564161-43563820 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 245 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 24, 135 |
Conread position: | 296-571 |
Cow position: | chr18:35797549-35797266 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 193 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 10, 132 |
Conread position: | 298-613 |
Cow position: | chr18:23447158-23447477 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 221 |
Conread position: | 300-526 |
Cow position: | chr18:43823029-43823263 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 171 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 12, 214 |
Conread position: | 302-537 |
Cow position: | chr18:6275738-6275495 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 184 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 10, 212 |
Conread position: | 309-503 |
Cow position: | chr18:56163492-56163298 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 137 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 50, 44 |
Conread position: | 314-638 |
Cow position: | chr18:30186005-30186341 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 248 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 28, 112 |
Conread position: | 318-638 |
Cow position: | chr18:21721377-21721703 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 166 |
Conread position: | 319-496 |
Cow position: | chr18:18976988-18976802 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 141 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 319-635 |
Cow position: | chr18:16134412-16134729 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 16 |
Conread position: | 322-485 |
Cow position: | chr18:4489979-4490145 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 127 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 11, 28 |
Conread position: | 324-565 |
Cow position: | chr18:39279104-39279354 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 175 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 37, 19 |
Conread position: | 325-635 |
Cow position: | chr18:20195608-20195923 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 210 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 9, 96 |
Conread position: | 325-635 |
Cow position: | chr18:31002892-31003195 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 209 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 9, 32 |
Conread position: | 325-638 |
Cow position: | chr18:33272834-33272523 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 80 |
Conread position: | 327-634 |
Cow position: | chr18:40893180-40892853 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 237 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 22, 31 |
Conread position: | 342-532 |
Cow position: | chr18:1733321-1733507 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 146 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 11, 75 |
Conread position: | 342-612 |
Cow position: | chr18:35535411-35535683 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 196 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 75, 138 |
Conread position: | 342-638 |
Cow position: | chr18:31082457-31082762 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 222 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 162, 11 |
Conread position: | 342-639 |
Cow position: | chr18:23949533-23949834 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 220 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 11, 166 |
Conread position: | 350-605 |
Cow position: | chr18:29264590-29264839 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 192 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 77, 129 |
Show alignments to all cow chromosomes.