Cow genome map


           Conread name:
           Pig3-SRG8014D21
        

               Conread position:
               175-621
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 104
               

               Conread position:
               207-635
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               27, 62
               

               Conread position:
               233-480
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               9, 255
               

               Conread position:
               233-491
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               18, 10
               

               Conread position:
               233-638
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 246
               

               Conread position:
               234-622
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               236-455
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               237-488
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               5, 79
               

               Conread position:
               237-611
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 49
               

               Conread position:
               237-635
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               280
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               106, 48
               

               Conread position:
               238-503
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               31, 53
               

               Conread position:
               238-621
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 47
               

               Conread position:
               238-638
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 5
               

               Conread position:
               240-516
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               14, 7
               

               Conread position:
               240-565
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               226
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               50, 27
               

               Conread position:
               240-569
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 230
               

               Conread position:
               240-582
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               41, 46
               

               Conread position:
               241-399
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               241-444
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               71, 34
               

               Conread position:
               241-445
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               72, 39
               

               Conread position:
               241-448
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               71, 43
               

               Conread position:
               241-500
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 48
               

               Conread position:
               241-516
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               241-521
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               71, 51
               

               Conread position:
               241-575
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 332
               

               Conread position:
               241-578
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 48
               

               Conread position:
               241-595
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               250
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               72, 44
               

               Conread position:
               241-637
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 43
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 41
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 42
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 80
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 40
               

               Conread position:
               243-484
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               69, 129
               

               Conread position:
               243-556
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               67, 42
               

               Conread position:
               243-638
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 41
               

               Conread position:
               243-642
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 28
               

               Conread position:
               244-565
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               247-602
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 43
               

               Conread position:
               247-634
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 118
               

               Conread position:
               249-635
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 111
               

               Conread position:
               250-506
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               16, 121
               

               Conread position:
               250-621
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 40
               

               Conread position:
               251-505
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               202
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               62, 32
               

               Conread position:
               251-638
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 16
               

               Conread position:
               252-498
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               93, 32
               

               Conread position:
               252-502
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               59, 37
               

               Conread position:
               252-507
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               59, 19
               

               Conread position:
               252-508
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               45, 113
               

               Conread position:
               252-513
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               55, 37
               

               Conread position:
               252-515
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               59, 45
               

               Conread position:
               252-516
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               65, 86
               

               Conread position:
               252-516
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               59, 114
               

               Conread position:
               252-583
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 32
               

               Conread position:
               252-621
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 211
               

               Conread position:
               252-621
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 89
               

               Conread position:
               252-635
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 114
               

               Conread position:
               252-638
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               277
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               36, 43
               

               Conread position:
               252-638
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               283
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               53, 121
               

               Conread position:
               256-638
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 26
               

               Conread position:
               260-501
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               46, 25
               

               Conread position:
               267-638
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 141
               

               Conread position:
               278-475
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               35, 94
               

               Conread position:
               279-537
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               74, 199
               

               Conread position:
               279-623
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 85
               

               Conread position:
               290-635
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 30
               

               Conread position:
               294-635
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 10
               

               Conread position:
               295-502
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 77
               

               Conread position:
               295-551
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               15, 203
               

               Conread position:
               295-600
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 115
               

               Conread position:
               296-484
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 193
               

               Conread position:
               296-618
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               33, 23
               

               Conread position:
               296-635
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 22
               

               Conread position:
               300-523
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               13, 111
               

               Conread position:
               309-541
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               39, 52
               

               Conread position:
               318-502
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               318-505
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               319-515
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               27, 51
               

               Conread position:
               319-606
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               27, 49
               

               Conread position:
               319-621
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               147, 27
               

               Conread position:
               319-638
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 16
               

               Conread position:
               320-635
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 16
               

               Conread position:
               320-635
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               81, 15
               

               Conread position:
               323-624
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 182
               

               Conread position:
               326-543
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               101, 95
               

               Conread position:
               332-638
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 8
               

               Conread position:
               333-639
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 19
               

               Conread position:
               342-497
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               342-638
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               221
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               342-639
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               212
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               23, 146
               

               Conread position:
               345-573
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               8, 160
               

               Conread position:
               346-607
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 160
               

               Conread position:
               346-638
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               68, 135
               

               Conread position:
               347-559
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               347-582
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               5, 11
               

               Conread position:
               350-636
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 160
               

               Conread position:
               353-636
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               7, 81
               

               Conread position:
               361-574
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               361-621
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               219, 58
               

               Conread position:
               363-608
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               221, 61
               
Show alignments to all cow chromosomes.