Cow genome map

Conread name: Pig3-SRG8014D21

Conread position: 193-548
Cow position: chr23:27862397-27862030 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 258
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 8, 97

Conread position: 227-638
Cow position: chr23:36309450-36309028 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 58

Conread position: 229-516
Cow position: chr23:29242973-29242678 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 5

Conread position: 233-502
Cow position: chr23:7220992-7221268 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 116, 10

Conread position: 233-638
Cow position: chr23:15056621-15057015 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 38

Conread position: 235-573
Cow position: chr23:15287120-15287461 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 113, 44

Conread position: 236-637
Cow position: chr23:24867327-24866918 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 7

Conread position: 237-635
Cow position: chr23:417164-416784 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 276
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 5, 45

Conread position: 240-484
Cow position: chr23:36075804-36076057 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 73, 120

Conread position: 240-503
Cow position: chr23:39302711-39302460 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 174, 32

Conread position: 240-638
Cow position: chr23:2501841-2502252 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 266
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 71, 49

Conread position: 241-378
Cow position: chr23:11081268-11081128 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 40

Conread position: 241-466
Cow position: chr23:1068304-1068531 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 72, 41

Conread position: 241-467
Cow position: chr23:40648720-40648947 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 44

Conread position: 241-483
Cow position: chr23:12050368-12050130 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 40

Conread position: 241-499
Cow position: chr23:33695760-33696026 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 71, 55

Conread position: 241-502
Cow position: chr23:19978942-19979202 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 112, 41

Conread position: 241-529
Cow position: chr23:187190-186892 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 71, 45

Conread position: 241-571
Cow position: chr23:39309098-39309435 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 273

Conread position: 241-577
Cow position: chr23:39753128-39752787 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 40

Conread position: 241-582
Cow position: chr23:4528865-4529224 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 293

Conread position: 241-600
Cow position: chr23:5152005-5151629 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 267
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 88, 29

Conread position: 241-613
Cow position: chr23:38455167-38455549 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 203

Conread position: 241-638
Cow position: chr23:11129245-11128844 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 100

Conread position: 243-483
Cow position: chr23:10868773-10868527 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 26

Conread position: 243-583
Cow position: chr23:6994973-6995299 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 39

Conread position: 243-638
Cow position: chr23:11473495-11473894 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 115

Conread position: 243-639
Cow position: chr23:13599352-13598964 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 36

Conread position: 243-639
Cow position: chr23:25675690-25676059 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 278
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 70, 39

Conread position: 252-445
Cow position: chr23:38973851-38973649 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 61, 162

Conread position: 252-482
Cow position: chr23:15743092-15742866 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 32

Conread position: 252-488
Cow position: chr23:1885172-1885416 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 32

Conread position: 252-493
Cow position: chr23:670620-670375 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 56, 24

Conread position: 252-503
Cow position: chr23:38854734-38854989 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 33

Conread position: 252-583
Cow position: chr23:5162434-5162094 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 161

Conread position: 252-604
Cow position: chr23:18367701-18367340 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 31

Conread position: 252-619
Cow position: chr23:14164397-14164773 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 115

Conread position: 252-620
Cow position: chr23:3208618-3208989 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 20

Conread position: 252-623
Cow position: chr23:1923836-1924207 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 14

Conread position: 252-634
Cow position: chr23:19002061-19002454 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 35

Conread position: 252-636
Cow position: chr23:9594832-9595216 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 30

Conread position: 252-636
Cow position: chr23:10554008-10554398 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 37

Conread position: 252-638
Cow position: chr23:10014541-10014157 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 29

Conread position: 252-638
Cow position: chr23:41472622-41472226 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 282
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 29, 46

Conread position: 254-490
Cow position: chr23:40891361-40891120 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 59, 127

Conread position: 254-491
Cow position: chr23:5706992-5706756 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 57, 29

Conread position: 254-620
Cow position: chr23:534229-533861 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 118

Conread position: 258-504
Cow position: chr23:6244594-6244843 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 9

Conread position: 263-481
Cow position: chr23:12290274-12290048 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 26

Conread position: 264-556
Cow position: chr23:3247576-3247285 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 109

Conread position: 265-484
Cow position: chr23:4522988-4523212 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 41

Conread position: 266-638
Cow position: chr23:1429807-1430189 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 78

Conread position: 267-482
Cow position: chr23:11081063-11080848 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 45, 14

Conread position: 270-638
Cow position: chr23:7175601-7175234 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 19

Conread position: 271-635
Cow position: chr23:19636276-19636650 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 11

Conread position: 271-648
Cow position: chr23:19758647-19759030 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 268
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 75, 16

Conread position: 272-459
Cow position: chr23:22399383-22399190 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 15, 10

Conread position: 272-518
Cow position: chr23:17092515-17092758 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 168
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 45

Conread position: 274-642
Cow position: chr23:13511715-13511343 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 11

Conread position: 275-496
Cow position: chr23:38248874-38248652 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 141

Conread position: 278-460
Cow position: chr23:18296786-18296595 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 285-509
Cow position: chr23:26949170-26948929 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 286-621
Cow position: chr23:6592730-6593082 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 126

Conread position: 289-483
Cow position: chr23:25378621-25378421 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 24, 162

Conread position: 294-516
Cow position: chr23:13555476-13555696 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 19, 44

Conread position: 298-502
Cow position: chr23:4810711-4810496 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 188

Conread position: 300-638
Cow position: chr23:7392336-7392672 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 52

Conread position: 309-638
Cow position: chr23:27563769-27564083 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 36

Conread position: 310-638
Cow position: chr23:7596389-7596718 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 89

Conread position: 316-628
Cow position: chr23:31607226-31607551 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 225
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 23, 42

Conread position: 317-569
Cow position: chr23:4972716-4972468 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 36, 102

Conread position: 318-502
Cow position: chr23:5395494-5395679 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 17

Conread position: 318-503
Cow position: chr23:11315095-11315272 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 33, 18

Conread position: 318-515
Cow position: chr23:38414028-38414224 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 75, 138

Conread position: 318-516
Cow position: chr23:1877939-1878141 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 43

Conread position: 319-534
Cow position: chr23:35362844-35363055 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 39

Conread position: 319-601
Cow position: chr23:13515106-13514828 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 87, 93

Conread position: 319-610
Cow position: chr23:15003929-15003643 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 10

Conread position: 319-635
Cow position: chr23:11564410-11564737 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 226
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 22, 37

Conread position: 321-634
Cow position: chr23:14895869-14896179 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 161

Conread position: 322-559
Cow position: chr23:1610785-1610533 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 14, 48

Conread position: 332-628
Cow position: chr23:10415110-10415404 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 9, 22

Conread position: 342-516
Cow position: chr23:4338697-4338874 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 45, 165

Conread position: 346-635
Cow position: chr23:24505151-24504862 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 71, 114

Conread position: 351-511
Cow position: chr23:39899284-39899129 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 359-620
Cow position: chr23:30912406-30912676 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 145, 0

Conread position: 516-638
Cow position: chr23:26795482-26795606 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 0

Show alignments to all cow chromosomes.