Cow genome map


           Conread name:
           Pig3-SRG8014D21
        

               Conread position:
               193-548
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               258
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               8, 97
               

               Conread position:
               227-638
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 58
               

               Conread position:
               229-516
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               13, 5
               

               Conread position:
               233-502
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               116, 10
               

               Conread position:
               233-638
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 38
               

               Conread position:
               235-573
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               245
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               113, 44
               

               Conread position:
               236-637
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               237-635
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               276
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               5, 45
               

               Conread position:
               240-484
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               73, 120
               

               Conread position:
               240-503
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               174, 32
               

               Conread position:
               240-638
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               266
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               71, 49
               

               Conread position:
               241-378
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               71, 40
               

               Conread position:
               241-466
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               72, 41
               

               Conread position:
               241-467
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               72, 44
               

               Conread position:
               241-483
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 40
               

               Conread position:
               241-499
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               71, 55
               

               Conread position:
               241-502
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               112, 41
               

               Conread position:
               241-529
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               222
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               71, 45
               

               Conread position:
               241-571
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 273
               

               Conread position:
               241-577
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 40
               

               Conread position:
               241-582
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 293
               

               Conread position:
               241-600
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               88, 29
               

               Conread position:
               241-613
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 203
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 100
               

               Conread position:
               243-483
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               49, 26
               

               Conread position:
               243-583
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 39
               

               Conread position:
               243-638
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 115
               

               Conread position:
               243-639
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 36
               

               Conread position:
               243-639
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               278
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               70, 39
               

               Conread position:
               252-445
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               61, 162
               

               Conread position:
               252-482
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               252-488
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               58, 32
               

               Conread position:
               252-493
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               56, 24
               

               Conread position:
               252-503
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               61, 33
               

               Conread position:
               252-583
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 161
               

               Conread position:
               252-604
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 31
               

               Conread position:
               252-619
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 115
               

               Conread position:
               252-620
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 20
               

               Conread position:
               252-623
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 14
               

               Conread position:
               252-634
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 35
               

               Conread position:
               252-636
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 30
               

               Conread position:
               252-636
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 37
               

               Conread position:
               252-638
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 29
               

               Conread position:
               252-638
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               282
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               29, 46
               

               Conread position:
               254-490
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               59, 127
               

               Conread position:
               254-491
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               57, 29
               

               Conread position:
               254-620
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 118
               

               Conread position:
               258-504
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               88, 9
               

               Conread position:
               263-481
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               48, 26
               

               Conread position:
               264-556
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 109
               

               Conread position:
               265-484
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 41
               

               Conread position:
               266-638
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 78
               

               Conread position:
               267-482
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               171
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               270-638
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 19
               

               Conread position:
               271-635
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 11
               

               Conread position:
               271-648
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               75, 16
               

               Conread position:
               272-459
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               15, 10
               

               Conread position:
               272-518
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 45
               

               Conread position:
               274-642
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               275-496
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 141
               

               Conread position:
               278-460
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               285-509
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               286-621
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 126
               

               Conread position:
               289-483
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               24, 162
               

               Conread position:
               294-516
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               19, 44
               

               Conread position:
               298-502
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               15, 188
               

               Conread position:
               300-638
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 52
               

               Conread position:
               309-638
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 36
               

               Conread position:
               310-638
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 89
               

               Conread position:
               316-628
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               23, 42
               

               Conread position:
               317-569
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               36, 102
               

               Conread position:
               318-502
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               84, 17
               

               Conread position:
               318-503
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               33, 18
               

               Conread position:
               318-515
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               75, 138
               

               Conread position:
               318-516
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               18, 43
               

               Conread position:
               319-534
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 39
               

               Conread position:
               319-601
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               87, 93
               

               Conread position:
               319-610
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               40, 10
               

               Conread position:
               319-635
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               321-634
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 161
               

               Conread position:
               322-559
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               332-628
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               9, 22
               

               Conread position:
               342-516
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               45, 165
               

               Conread position:
               346-635
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               71, 114
               

               Conread position:
               351-511
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               359-620
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               516-638
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               69, 0
               
Show alignments to all cow chromosomes.