Cow genome map


           Conread name:
           Pig3-SRG8014D21
        

               Conread position:
               231-638
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 147
               

               Conread position:
               233-511
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 10
               

               Conread position:
               233-638
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 51
               

               Conread position:
               236-568
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               236-635
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               236-638
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               46, 16
               

               Conread position:
               240-638
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 239
               

               Conread position:
               240-656
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               288
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               70, 406
               

               Conread position:
               241-499
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               40, 135
               

               Conread position:
               241-509
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 170
               

               Conread position:
               241-515
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               208
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               36, 172
               

               Conread position:
               241-543
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 41
               

               Conread position:
               241-575
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 41
               

               Conread position:
               241-581
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 47
               

               Conread position:
               241-599
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 32
               

               Conread position:
               241-602
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 159
               

               Conread position:
               241-620
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 104
               

               Conread position:
               241-622
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               241-637
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 44
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 53
               

               Conread position:
               241-639
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 44
               

               Conread position:
               241-643
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 125
               

               Conread position:
               243-457
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               36, 109
               

               Conread position:
               243-458
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               70, 41
               

               Conread position:
               243-555
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               225
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               8, 56
               

               Conread position:
               243-598
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 48
               

               Conread position:
               243-638
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 41
               

               Conread position:
               248-638
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 50
               

               Conread position:
               250-638
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 51
               

               Conread position:
               252-449
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               94, 30
               

               Conread position:
               252-470
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 112
               

               Conread position:
               252-471
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               61, 32
               

               Conread position:
               252-488
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               27, 18
               

               Conread position:
               252-506
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               10, 21
               

               Conread position:
               252-510
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               31, 48
               

               Conread position:
               252-515
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               101, 32
               

               Conread position:
               252-553
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               61, 33
               

               Conread position:
               252-565
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-601
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               261
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               252-614
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 32
               

               Conread position:
               252-622
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 90
               

               Conread position:
               252-636
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 20
               

               Conread position:
               253-613
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 160
               

               Conread position:
               254-583
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               86, 42
               

               Conread position:
               254-606
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               238
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               58, 113
               

               Conread position:
               256-638
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               57, 29
               

               Conread position:
               263-638
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 260
               

               Conread position:
               268-638
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 29
               

               Conread position:
               272-655
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               267
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               41, 233
               

               Conread position:
               277-509
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               72, 42
               

               Conread position:
               285-515
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 53
               

               Conread position:
               285-638
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 236
               

               Conread position:
               285-638
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 88
               

               Conread position:
               286-621
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               265
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               22, 115
               

               Conread position:
               286-638
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 87
               

               Conread position:
               295-508
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               295-601
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 5
               

               Conread position:
               296-475
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 109
               

               Conread position:
               296-599
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               17, 218
               

               Conread position:
               296-621
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 192
               

               Conread position:
               296-636
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 148
               

               Conread position:
               296-638
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 187
               

               Conread position:
               298-638
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 220
               

               Conread position:
               300-502
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               12, 185
               

               Conread position:
               300-582
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               11, 73
               

               Conread position:
               318-595
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 52
               

               Conread position:
               318-637
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               26, 52
               

               Conread position:
               318-638
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               242
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               33, 83
               

               Conread position:
               319-527
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 21
               

               Conread position:
               319-623
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 216
               

               Conread position:
               319-633
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               28, 161
               

               Conread position:
               319-638
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 40
               

               Conread position:
               323-638
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               23, 305
               

               Conread position:
               332-606
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               20, 179
               

               Conread position:
               342-521
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               9, 26
               

               Conread position:
               342-638
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               10, 75
               

               Conread position:
               342-639
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               217
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               11, 171
               

               Conread position:
               345-582
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               56, 20
               

               Conread position:
               345-639
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               7, 37
               

               Conread position:
               350-592
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               17, 117
               

               Conread position:
               350-638
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               234, 42
               

               Conread position:
               360-583
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               435-639
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               152, 80
               

               Conread position:
               474-639
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               111, 33
               
Show alignments to all cow chromosomes.