Cow genome map

Conread name: Pig3-SRG8014D21

Conread position: 209-638
Cow position: chr27:17397538-17397107 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 9

Conread position: 227-543
Cow position: chr27:12516126-12516448 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 237
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 84, 55

Conread position: 227-636
Cow position: chr27:1058748-1058337 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 292
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 68, 44

Conread position: 232-385
Cow position: chr27:22559890-22559726 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 232-537
Cow position: chr27:11081143-11081441 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 121, 5

Conread position: 233-461
Cow position: chr27:15409098-15408872 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 10

Conread position: 238-638
Cow position: chr27:22549822-22549439 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 284
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 114, 32

Conread position: 239-638
Cow position: chr27:10992296-10992714 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 286

Conread position: 240-638
Cow position: chr27:4672962-4673362 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 273

Conread position: 240-638
Cow position: chr27:22418824-22418420 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 126

Conread position: 241-450
Cow position: chr27:27270593-27270377 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 105, 16

Conread position: 241-461
Cow position: chr27:13841316-13841548 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 241-462
Cow position: chr27:9169699-9169472 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 41

Conread position: 241-503
Cow position: chr27:26238970-26239237 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 178
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 10, 131

Conread position: 241-516
Cow position: chr27:30764978-30765258 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 54, 167

Conread position: 241-534
Cow position: chr27:10979810-10980106 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 36

Conread position: 241-599
Cow position: chr27:11536158-11535789 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 48

Conread position: 241-637
Cow position: chr27:17472755-17473167 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 41

Conread position: 241-638
Cow position: chr27:13875675-13876073 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 52

Conread position: 241-638
Cow position: chr27:16237856-16238243 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 48

Conread position: 241-638
Cow position: chr27:24999793-24999389 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 43

Conread position: 241-638
Cow position: chr27:27040549-27040943 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 41

Conread position: 242-577
Cow position: chr27:26413306-26412973 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 41

Conread position: 243-457
Cow position: chr27:15643122-15643343 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 70, 39

Conread position: 243-501
Cow position: chr27:30359354-30359606 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 8, 41

Conread position: 243-620
Cow position: chr27:16786778-16787161 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 32

Conread position: 244-516
Cow position: chr27:4812935-4812651 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 5, 131

Conread position: 249-480
Cow position: chr27:30670695-30670927 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 55, 144

Conread position: 250-505
Cow position: chr27:27528400-27528146 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 34

Conread position: 252-496
Cow position: chr27:1498273-1498520 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 59, 45

Conread position: 252-507
Cow position: chr27:19660890-19661160 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 59, 175

Conread position: 252-515
Cow position: chr27:2592501-2592766 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 208
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 29, 148

Conread position: 252-542
Cow position: chr27:24014781-24014491 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 62, 31

Conread position: 252-618
Cow position: chr27:30868782-30868413 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 32

Conread position: 252-636
Cow position: chr27:14670424-14670036 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 50

Conread position: 252-638
Cow position: chr27:27141560-27141939 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 31

Conread position: 252-646
Cow position: chr27:26999464-26999070 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 31

Conread position: 253-496
Cow position: chr27:25277099-25277341 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 190
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 93, 31

Conread position: 253-496
Cow position: chr27:30814372-30814608 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 111

Conread position: 254-522
Cow position: chr27:26865158-26864889 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 27

Conread position: 254-582
Cow position: chr27:15859129-15858801 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 35

Conread position: 254-621
Cow position: chr27:25411561-25411185 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 18

Conread position: 254-622
Cow position: chr27:815324-815696 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 13

Conread position: 260-498
Cow position: chr27:18031102-18030853 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 28

Conread position: 267-521
Cow position: chr27:27641035-27640760 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 210
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 23, 231

Conread position: 267-622
Cow position: chr27:12246630-12246976 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 257
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 80, 95

Conread position: 268-623
Cow position: chr27:13197893-13198237 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 17

Conread position: 270-638
Cow position: chr27:27684149-27683768 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 105

Conread position: 271-492
Cow position: chr27:27003298-27003079 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 42, 13

Conread position: 271-497
Cow position: chr27:1884023-1884245 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 80, 36

Conread position: 272-598
Cow position: chr27:28931816-28931484 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 13

Conread position: 272-634
Cow position: chr27:8430463-8430084 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 252
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 85

Conread position: 274-516
Cow position: chr27:13639017-13638766 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 274-638
Cow position: chr27:15866193-15866568 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 8

Conread position: 275-574
Cow position: chr27:2957383-2957686 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 71, 49

Conread position: 276-515
Cow position: chr27:19577653-19577899 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 85

Conread position: 278-578
Cow position: chr27:26581455-26581160 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 21, 7

Conread position: 279-537
Cow position: chr27:28518277-28518530 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 59

Conread position: 285-564
Cow position: chr27:12429392-12429684 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 33

Conread position: 286-516
Cow position: chr27:22498546-22498779 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 183
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 25, 79

Conread position: 289-550
Cow position: chr27:28921905-28921641 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 24, 72

Conread position: 289-605
Cow position: chr27:29399807-29400133 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 19, 112

Conread position: 292-513
Cow position: chr27:26625126-26625350 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 21, 46

Conread position: 295-549
Cow position: chr27:26509162-26508904 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 18, 9

Conread position: 296-488
Cow position: chr27:29283410-29283212 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 189

Conread position: 296-531
Cow position: chr27:15200700-15200940 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 42

Conread position: 298-636
Cow position: chr27:11412720-11413060 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 55

Conread position: 301-638
Cow position: chr27:22179788-22179441 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 250
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 13, 91

Conread position: 310-543
Cow position: chr27:2930583-2930345 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 32, 201

Conread position: 316-638
Cow position: chr27:26428111-26427781 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 197

Conread position: 317-620
Cow position: chr27:4825084-4824787 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 45, 19

Conread position: 318-535
Cow position: chr27:30890311-30890529 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 45

Conread position: 319-509
Cow position: chr27:29038914-29038721 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 15

Conread position: 319-598
Cow position: chr27:13860716-13860437 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 140

Conread position: 320-620
Cow position: chr27:31372266-31371963 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 211
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 28, 104

Conread position: 323-621
Cow position: chr27:26959589-26959294 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 16, 47

Conread position: 325-638
Cow position: chr27:16822842-16823155 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 232
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 10, 78

Conread position: 330-642
Cow position: chr27:15926812-15927124 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 16

Conread position: 337-547
Cow position: chr27:18438954-18439153 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 337-606
Cow position: chr27:18205382-18205647 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 81, 96

Conread position: 342-639
Cow position: chr27:11482043-11481753 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 11, 122

Conread position: 346-503
Cow position: chr27:26406987-26406830 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 55, 11

Conread position: 355-492
Cow position: chr27:13847703-13847841 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 356-577
Cow position: chr27:3256108-3256322 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 20, 11

Conread position: 357-636
Cow position: chr27:12650563-12650289 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 113, 152

Conread position: 357-637
Cow position: chr27:1173481-1173197 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 156

Conread position: 358-542
Cow position: chr27:630389-630571 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 160, 0

Conread position: 457-638
Cow position: chr27:16292563-16292742 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 29, 50

Conread position: 474-639
Cow position: chr27:21297084-21297249 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 134
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 111, 33

Conread position: 516-639
Cow position: chr27:4389986-4389861 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 101

Show alignments to all cow chromosomes.