Cow genome map


           Conread name:
           Pig3-SRG8014D21
        

               Conread position:
               199-515
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               17, 35
               

               Conread position:
               210-488
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               101, 57
               

               Conread position:
               212-614
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               293
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               22, 75
               

               Conread position:
               223-471
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               229-525
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               5, 15
               

               Conread position:
               233-483
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               9, 50
               

               Conread position:
               233-515
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               80, 7
               

               Conread position:
               233-591
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 10
               

               Conread position:
               240-502
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               71, 49
               

               Conread position:
               240-549
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               71, 125
               

               Conread position:
               240-621
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 43
               

               Conread position:
               240-642
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 43
               

               Conread position:
               241-462
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               71, 48
               

               Conread position:
               241-509
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               71, 43
               

               Conread position:
               241-548
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 43
               

               Conread position:
               241-610
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 41
               

               Conread position:
               241-637
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 41
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 56
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 41
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 42
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 75
               

               Conread position:
               243-621
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 42
               

               Conread position:
               243-635
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 42
               

               Conread position:
               247-486
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               10, 129
               

               Conread position:
               249-504
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               61, 35
               

               Conread position:
               249-621
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               249-638
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 28
               

               Conread position:
               250-576
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 32
               

               Conread position:
               252-507
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               59, 32
               

               Conread position:
               252-517
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               94, 65
               

               Conread position:
               252-576
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 33
               

               Conread position:
               252-578
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               38, 20
               

               Conread position:
               252-621
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 114
               

               Conread position:
               252-637
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 32
               

               Conread position:
               252-638
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 114
               

               Conread position:
               253-512
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               66, 32
               

               Conread position:
               253-639
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 30
               

               Conread position:
               254-515
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               57, 50
               

               Conread position:
               254-592
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               59, 28
               

               Conread position:
               254-638
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               262
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               59, 42
               

               Conread position:
               256-470
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 25
               

               Conread position:
               258-543
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               10, 43
               

               Conread position:
               261-643
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 9
               

               Conread position:
               268-638
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 51
               

               Conread position:
               271-621
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               275-534
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 250
               

               Conread position:
               276-621
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 246
               

               Conread position:
               276-621
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               38, 51
               

               Conread position:
               277-505
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               33, 96
               

               Conread position:
               277-511
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               36, 134
               

               Conread position:
               278-638
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 7
               

               Conread position:
               285-515
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               27, 49
               

               Conread position:
               289-643
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 343
               

               Conread position:
               291-543
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               22, 191
               

               Conread position:
               294-483
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 125
               

               Conread position:
               294-636
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               294-638
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 51
               

               Conread position:
               295-638
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 56
               

               Conread position:
               295-638
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               43, 22
               

               Conread position:
               296-621
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               17, 131
               

               Conread position:
               296-638
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 132
               

               Conread position:
               296-642
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 159
               

               Conread position:
               297-621
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 213
               

               Conread position:
               298-638
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 215
               

               Conread position:
               300-513
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               13, 82
               

               Conread position:
               310-636
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 88
               

               Conread position:
               310-638
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 168
               

               Conread position:
               312-635
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               9, 38
               

               Conread position:
               316-598
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 90
               

               Conread position:
               318-491
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               35, 48
               

               Conread position:
               318-494
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               79, 10
               

               Conread position:
               318-620
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               35, 41
               

               Conread position:
               319-531
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               24, 163
               

               Conread position:
               319-544
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               34, 16
               

               Conread position:
               319-620
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               95, 162
               

               Conread position:
               319-635
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               28, 305
               

               Conread position:
               320-637
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 43
               

               Conread position:
               322-508
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               27, 134
               

               Conread position:
               324-646
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               21, 33
               

               Conread position:
               327-621
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 10
               

               Conread position:
               331-556
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               176
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               31, 77
               

               Conread position:
               332-471
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               342-487
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               10, 25
               

               Conread position:
               342-581
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               10, 17
               

               Conread position:
               342-637
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               342-638
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 279
               

               Conread position:
               342-638
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 200
               

               Conread position:
               342-639
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               11, 107
               

               Conread position:
               347-638
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 135
               

               Conread position:
               350-634
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               234, 7
               

               Conread position:
               353-636
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               8, 146
               

               Conread position:
               357-531
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               359-514
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               42, 95
               

               Conread position:
               361-568
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               372-638
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 66
               

               Conread position:
               375-539
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               26, 96
               

               Conread position:
               377-638
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 128
               

               Conread position:
               514-638
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               71, 0
               
Show alignments to all cow chromosomes.