Cow genome map


           Conread name:
           Pig3-SRG8014D21
        

               Conread position:
               198-513
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               17, 275
               

               Conread position:
               213-458
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               25, 71
               

               Conread position:
               232-638
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 83
               

               Conread position:
               233-492
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               18, 10
               

               Conread position:
               233-638
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 49
               

               Conread position:
               233-638
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 69
               

               Conread position:
               235-491
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               78, 50
               

               Conread position:
               240-515
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               77, 29
               

               Conread position:
               240-620
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 44
               

               Conread position:
               240-621
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               252
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               100, 12
               

               Conread position:
               240-636
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               284
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               71, 125
               

               Conread position:
               241-467
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               72, 40
               

               Conread position:
               241-474
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               112, 10
               

               Conread position:
               241-483
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               49, 34
               

               Conread position:
               241-515
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 30
               

               Conread position:
               241-549
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 43
               

               Conread position:
               241-559
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 30
               

               Conread position:
               241-621
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 133
               

               Conread position:
               241-635
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 8
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 47
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 245
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 44
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 61
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 41
               

               Conread position:
               241-638
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 43
               

               Conread position:
               243-460
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               243-495
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               243-637
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 30
               

               Conread position:
               249-653
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               252-398
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               39, 113
               

               Conread position:
               252-512
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               61, 36
               

               Conread position:
               252-570
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 37
               

               Conread position:
               252-607
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 29
               

               Conread position:
               252-638
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               35, 16
               

               Conread position:
               252-639
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               252-642
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 85
               

               Conread position:
               252-642
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 35
               

               Conread position:
               254-465
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               58, 84
               

               Conread position:
               254-523
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               59, 112
               

               Conread position:
               257-515
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               56, 29
               

               Conread position:
               258-574
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               270-486
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               270-523
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               40, 15
               

               Conread position:
               271-581
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               41, 56
               

               Conread position:
               271-583
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               80, 18
               

               Conread position:
               272-636
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               261
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               92, 11
               

               Conread position:
               273-510
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               40, 12
               

               Conread position:
               274-505
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               12, 170
               

               Conread position:
               275-482
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               169
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               38, 10
               

               Conread position:
               275-607
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               285-621
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 80
               

               Conread position:
               289-636
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               251
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               36, 15
               

               Conread position:
               289-638
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 181
               

               Conread position:
               292-639
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               294-516
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               54, 24
               

               Conread position:
               296-574
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               17, 64
               

               Conread position:
               299-637
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               260
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               14, 172
               

               Conread position:
               300-523
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 69
               

               Conread position:
               309-607
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               35, 105
               

               Conread position:
               310-515
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               310-638
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 43
               

               Conread position:
               311-638
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 197
               

               Conread position:
               311-638
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               234
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               316-638
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 196
               

               Conread position:
               319-623
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               227
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               28, 308
               

               Conread position:
               321-638
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               323-593
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 13
               

               Conread position:
               323-638
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 40
               

               Conread position:
               333-549
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               10, 172
               

               Conread position:
               333-635
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 176
               

               Conread position:
               342-639
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               11, 42
               

               Conread position:
               345-635
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               31, 9
               

               Conread position:
               346-643
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 160
               

               Conread position:
               357-555
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               40, 98
               

               Conread position:
               359-638
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 149
               

               Conread position:
               362-532
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               35, 41
               

               Conread position:
               387-636
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               48, 25
               
Show alignments to all cow chromosomes.