Cow genome map

Conread name: Pig3-SRG8014D21

Conread position: 198-513
Cow position: chr29:31929042-31928711 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 17, 275

Conread position: 213-458
Cow position: chr29:22778138-22778395 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 25, 71

Conread position: 232-638
Cow position: chr29:24624266-24623851 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 83

Conread position: 233-492
Cow position: chr29:25737398-25737664 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 10

Conread position: 233-638
Cow position: chr29:4480155-4480566 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 49

Conread position: 233-638
Cow position: chr29:35292108-35291706 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 69

Conread position: 235-491
Cow position: chr29:10235117-10235361 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 50

Conread position: 240-515
Cow position: chr29:26129507-26129229 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 29

Conread position: 240-620
Cow position: chr29:39567694-39567312 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 44

Conread position: 240-621
Cow position: chr29:17543452-17543079 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 252
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 100, 12

Conread position: 240-636
Cow position: chr29:9912184-9911772 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 284
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 71, 125

Conread position: 241-467
Cow position: chr29:2533066-2532839 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 72, 40

Conread position: 241-474
Cow position: chr29:1229614-1229379 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 112, 10

Conread position: 241-483
Cow position: chr29:42886398-42886143 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 34

Conread position: 241-515
Cow position: chr29:16195849-16195582 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 30

Conread position: 241-549
Cow position: chr29:26735036-26734731 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 43

Conread position: 241-559
Cow position: chr29:4624989-4625305 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 30

Conread position: 241-621
Cow position: chr29:2744260-2744647 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 133

Conread position: 241-635
Cow position: chr29:1306853-1307252 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 8

Conread position: 241-638
Cow position: chr29:465392-465791 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 47

Conread position: 241-638
Cow position: chr29:3704191-3704590 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 245

Conread position: 241-638
Cow position: chr29:12004755-12005157 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 44

Conread position: 241-638
Cow position: chr29:16609755-16609348 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 61

Conread position: 241-638
Cow position: chr29:21443331-21443738 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 41

Conread position: 241-638
Cow position: chr29:32290616-32290210 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 43

Conread position: 243-460
Cow position: chr29:14484532-14484761 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 243-495
Cow position: chr29:18735634-18735893 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 15, 26

Conread position: 243-637
Cow position: chr29:21196646-21197041 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 30

Conread position: 249-653
Cow position: chr29:31926290-31926697 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 33

Conread position: 252-398
Cow position: chr29:31674629-31674477 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 39, 113

Conread position: 252-512
Cow position: chr29:29769355-29769613 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 61, 36

Conread position: 252-570
Cow position: chr29:16657690-16657368 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 37

Conread position: 252-607
Cow position: chr29:23874456-23874095 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 29

Conread position: 252-638
Cow position: chr29:4367722-4367345 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 258
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 16

Conread position: 252-639
Cow position: chr29:732617-732233 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 278
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 35, 29

Conread position: 252-642
Cow position: chr29:17111-17490 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 85

Conread position: 252-642
Cow position: chr29:36217111-36216723 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 35

Conread position: 254-465
Cow position: chr29:463660-463874 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 84

Conread position: 254-523
Cow position: chr29:39111317-39111584 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 112

Conread position: 257-515
Cow position: chr29:12783963-12784226 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 56, 29

Conread position: 258-574
Cow position: chr29:10838943-10838624 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 226
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 8

Conread position: 270-486
Cow position: chr29:3711371-3711145 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 43, 12

Conread position: 270-523
Cow position: chr29:3396086-3395834 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 40, 15

Conread position: 271-581
Cow position: chr29:29548222-29547915 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 56

Conread position: 271-583
Cow position: chr29:26290606-26290917 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 80, 18

Conread position: 272-636
Cow position: chr29:17668467-17668115 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 92, 11

Conread position: 273-510
Cow position: chr29:13634323-13634565 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 40, 12

Conread position: 274-505
Cow position: chr29:19389466-19389226 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 12, 170

Conread position: 275-482
Cow position: chr29:4520311-4520099 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 38, 10

Conread position: 275-607
Cow position: chr29:32963533-32963178 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 243
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 285-621
Cow position: chr29:24952655-24952312 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 80

Conread position: 289-636
Cow position: chr29:9512182-9511826 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 251
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 36, 15

Conread position: 289-638
Cow position: chr29:45650380-45650730 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 181

Conread position: 292-639
Cow position: chr29:25088710-25088341 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 78

Conread position: 294-516
Cow position: chr29:2522526-2522307 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 24

Conread position: 296-574
Cow position: chr29:7407932-7408217 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 17, 64

Conread position: 299-637
Cow position: chr29:13615684-13616046 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 260
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 14, 172

Conread position: 300-523
Cow position: chr29:34359854-34360070 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 69

Conread position: 309-607
Cow position: chr29:26519521-26519821 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 35, 105

Conread position: 310-515
Cow position: chr29:5919383-5919596 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 42, 0

Conread position: 310-638
Cow position: chr29:2188409-2188740 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 43

Conread position: 311-638
Cow position: chr29:26130721-26130401 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 197

Conread position: 311-638
Cow position: chr29:26289148-26289479 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 234
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 13, 60

Conread position: 316-638
Cow position: chr29:1933621-1933952 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 196

Conread position: 319-623
Cow position: chr29:650209-649891 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 28, 308

Conread position: 321-638
Cow position: chr29:4874971-4875296 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 323-593
Cow position: chr29:40902800-40903067 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 13

Conread position: 323-638
Cow position: chr29:35501725-35502038 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 40

Conread position: 333-549
Cow position: chr29:38760244-38760453 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 172

Conread position: 333-635
Cow position: chr29:22339300-22339608 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 203
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 176

Conread position: 342-639
Cow position: chr29:28990847-28990552 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 11, 42

Conread position: 345-635
Cow position: chr29:13040653-13040942 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 31, 9

Conread position: 346-643
Cow position: chr29:21665869-21665578 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 160

Conread position: 357-555
Cow position: chr29:22721018-22720823 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 40, 98

Conread position: 359-638
Cow position: chr29:29632047-29632329 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 149

Conread position: 362-532
Cow position: chr29:45588590-45588760 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 41

Conread position: 387-636
Cow position: chr29:34734325-34734564 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 25

Show alignments to all cow chromosomes.