Cow genome map
| Conread name: | Pig3-SRG8014D21 |
| Conread position: | 179-637 |
| Cow position: | chr3:51146613-51147075 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 79 |
| Conread position: | 193-620 |
| Cow position: | chr3:50614675-50614249 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 293 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 207-622 |
| Cow position: | chr3:6873224-6873653 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 292 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 55, 27 |
| Conread position: | 212-638 |
| Cow position: | chr3:23169050-23169484 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 232-621 |
| Cow position: | chr3:12255476-12255083 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 267 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 11, 194 |
| Conread position: | 233-471 |
| Cow position: | chr3:43233500-43233255 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 56 |
| Conread position: | 233-512 |
| Cow position: | chr3:27274525-27274251 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 233-578 |
| Cow position: | chr3:73759522-73759894 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 235-635 |
| Cow position: | chr3:55460505-55460907 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 236-482 |
| Cow position: | chr3:52608173-52607924 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 7 |
| Conread position: | 236-499 |
| Cow position: | chr3:73764201-73764469 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 10, 51 |
| Conread position: | 236-642 |
| Cow position: | chr3:50768670-50768255 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 7 |
| Conread position: | 237-481 |
| Cow position: | chr3:22820562-22820312 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 5, 188 |
| Conread position: | 240-492 |
| Cow position: | chr3:14632997-14633255 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 71, 124 |
| Conread position: | 240-519 |
| Cow position: | chr3:55124294-55124574 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 98 |
| Conread position: | 240-574 |
| Cow position: | chr3:66708080-66708421 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 47, 188 |
| Conread position: | 240-619 |
| Cow position: | chr3:48530622-48530242 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 43 |
| Conread position: | 240-638 |
| Cow position: | chr3:66609856-66610252 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 241-422 |
| Cow position: | chr3:55712425-55712231 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 33, 62 |
| Conread position: | 241-470 |
| Cow position: | chr3:59885378-59885124 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 241-482 |
| Cow position: | chr3:30008923-30009168 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 56, 99 |
| Conread position: | 241-493 |
| Cow position: | chr3:13301865-13302126 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 72, 35 |
| Conread position: | 241-494 |
| Cow position: | chr3:84000598-84000341 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 241-495 |
| Cow position: | chr3:45279451-45279185 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 21, 58 |
| Conread position: | 241-503 |
| Cow position: | chr3:53046674-53046937 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 102, 74 |
| Conread position: | 241-503 |
| Cow position: | chr3:63860904-63861181 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 241-505 |
| Cow position: | chr3:66900748-66901024 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 69, 86 |
| Conread position: | 241-515 |
| Cow position: | chr3:23471474-23471760 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 241-523 |
| Cow position: | chr3:30463186-30463464 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 21, 30 |
| Conread position: | 241-530 |
| Cow position: | chr3:2216353-2216055 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 71, 56 |
| Conread position: | 241-548 |
| Cow position: | chr3:31309369-31309685 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 38, 68 |
| Conread position: | 241-599 |
| Cow position: | chr3:31206861-31206497 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 241-602 |
| Cow position: | chr3:49460941-49461316 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 277 |
| Conread position: | 241-621 |
| Cow position: | chr3:53384295-53384681 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 46 |
| Conread position: | 241-624 |
| Cow position: | chr3:19708119-19708497 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 41 |
| Conread position: | 241-635 |
| Cow position: | chr3:1830588-1830976 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 26 |
| Conread position: | 241-637 |
| Cow position: | chr3:60892608-60892219 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 30 |
| Conread position: | 241-637 |
| Cow position: | chr3:66375305-66374916 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 45 |
| Conread position: | 241-637 |
| Cow position: | chr3:76172683-76173075 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 41 |
| Conread position: | 241-638 |
| Cow position: | chr3:2903308-2903711 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 112 |
| Conread position: | 241-638 |
| Cow position: | chr3:44534774-44535174 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 72, 43 |
| Conread position: | 241-639 |
| Cow position: | chr3:59000767-59001155 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 43 |
| Conread position: | 241-642 |
| Cow position: | chr3:79292814-79292410 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 40 |
| Conread position: | 241-647 |
| Cow position: | chr3:48269850-48269440 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 92 |
| Conread position: | 242-443 |
| Cow position: | chr3:45211285-45211075 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 52, 40 |
| Conread position: | 243-543 |
| Cow position: | chr3:78201251-78200949 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 81, 42 |
| Conread position: | 243-607 |
| Cow position: | chr3:53270813-53270443 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 42 |
| Conread position: | 243-636 |
| Cow position: | chr3:82461162-82460760 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 291 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 38, 46 |
| Conread position: | 243-638 |
| Cow position: | chr3:17936854-17937265 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 44 |
| Conread position: | 243-638 |
| Cow position: | chr3:41366997-41367396 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 241 |
| Conread position: | 243-638 |
| Cow position: | chr3:52017754-52017346 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 39 |
| Conread position: | 245-636 |
| Cow position: | chr3:14626175-14626562 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 36 |
| Conread position: | 246-460 |
| Cow position: | chr3:27940150-27940365 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 10, 63 |
| Conread position: | 246-502 |
| Cow position: | chr3:42483888-42483621 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 63, 39 |
| Conread position: | 246-502 |
| Cow position: | chr3:57624444-57624184 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 67, 36 |
| Conread position: | 247-511 |
| Cow position: | chr3:19006637-19006379 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 94, 42 |
| Conread position: | 252-461 |
| Cow position: | chr3:34937821-34937602 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 33, 24 |
| Conread position: | 252-481 |
| Cow position: | chr3:8061103-8060874 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 62, 119 |
| Conread position: | 252-482 |
| Cow position: | chr3:4087185-4087424 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 33, 167 |
| Conread position: | 252-485 |
| Cow position: | chr3:8604044-8604275 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 252-492 |
| Cow position: | chr3:17450965-17451203 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 28, 45 |
| Conread position: | 252-494 |
| Cow position: | chr3:73460941-73460709 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 69 |
| Conread position: | 252-509 |
| Cow position: | chr3:8393324-8393060 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 60, 37 |
| Conread position: | 252-513 |
| Cow position: | chr3:73443115-73443377 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 54, 23 |
| Conread position: | 252-515 |
| Cow position: | chr3:23945076-23944805 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 252-515 |
| Cow position: | chr3:68708034-68708293 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 88, 52 |
| Conread position: | 252-515 |
| Cow position: | chr3:78945857-78946131 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 58, 110 |
| Conread position: | 252-516 |
| Cow position: | chr3:14601737-14602006 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 58, 29 |
| Conread position: | 252-535 |
| Cow position: | chr3:65800566-65800285 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 114 |
| Conread position: | 252-570 |
| Cow position: | chr3:17222168-17222496 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 61, 106 |
| Conread position: | 252-577 |
| Cow position: | chr3:34315980-34316331 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 252-621 |
| Cow position: | chr3:77496803-77496420 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 118 |
| Conread position: | 252-622 |
| Cow position: | chr3:31046977-31047340 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 36 |
| Conread position: | 252-635 |
| Cow position: | chr3:26920883-26920488 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 30 |
| Conread position: | 252-636 |
| Cow position: | chr3:33327683-33327281 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 270 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 22, 15 |
| Conread position: | 252-638 |
| Cow position: | chr3:2008245-2007859 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 111 |
| Conread position: | 252-638 |
| Cow position: | chr3:29887447-29887838 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 38 |
| Conread position: | 252-638 |
| Cow position: | chr3:80740541-80740177 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 271 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 59, 105 |
| Conread position: | 252-640 |
| Cow position: | chr3:15051974-15052344 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 282 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 59, 114 |
| Conread position: | 253-439 |
| Cow position: | chr3:4319684-4319494 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 253-543 |
| Cow position: | chr3:67704519-67704218 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 113 |
| Conread position: | 253-571 |
| Cow position: | chr3:70896017-70895701 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 232 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 87, 22 |
| Conread position: | 253-638 |
| Cow position: | chr3:26904083-26903703 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 29 |
| Conread position: | 254-621 |
| Cow position: | chr3:7337810-7338174 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 28 |
| Conread position: | 254-635 |
| Cow position: | chr3:56059783-56059376 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 170 |
| Conread position: | 254-638 |
| Cow position: | chr3:70565766-70566152 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 30 |
| Conread position: | 255-462 |
| Cow position: | chr3:83201548-83201767 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 16, 112 |
| Conread position: | 255-510 |
| Cow position: | chr3:75057159-75057400 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 84 |
| Conread position: | 255-542 |
| Cow position: | chr3:53113146-53112851 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 27 |
| Conread position: | 255-604 |
| Cow position: | chr3:35283118-35283466 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 29 |
| Conread position: | 255-638 |
| Cow position: | chr3:59649228-59648850 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 53, 25 |
| Conread position: | 257-473 |
| Cow position: | chr3:15752662-15752878 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 54, 105 |
| Conread position: | 258-651 |
| Cow position: | chr3:14552850-14552447 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 125 |
| Conread position: | 263-569 |
| Cow position: | chr3:16547647-16547332 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 252 |
| Conread position: | 265-471 |
| Cow position: | chr3:44932477-44932260 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 20, 33 |
| Conread position: | 265-634 |
| Cow position: | chr3:68342291-68342666 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 254 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 82, 181 |
| Conread position: | 269-638 |
| Cow position: | chr3:79208037-79208402 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 242 |
| Conread position: | 270-635 |
| Cow position: | chr3:20802664-20803038 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 220 |
| Conread position: | 270-636 |
| Cow position: | chr3:48296668-48296299 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 12 |
| Conread position: | 273-505 |
| Cow position: | chr3:49140085-49140329 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 40, 92 |
| Conread position: | 273-620 |
| Cow position: | chr3:43657750-43658111 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 238 |
| Conread position: | 274-638 |
| Cow position: | chr3:2630749-2630381 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 274-638 |
| Cow position: | chr3:74088213-74088575 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 215 |
| Conread position: | 277-482 |
| Cow position: | chr3:71238108-71237899 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 278-469 |
| Cow position: | chr3:23444946-23445136 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 68, 11 |
| Conread position: | 278-621 |
| Cow position: | chr3:62292171-62292536 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 285-521 |
| Cow position: | chr3:66116166-66116411 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 285-583 |
| Cow position: | chr3:57764171-57763849 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 28, 5 |
| Conread position: | 285-638 |
| Cow position: | chr3:82056164-82056522 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 261 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 26, 208 |
| Conread position: | 286-530 |
| Cow position: | chr3:70401845-70401598 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 197 |
| Conread position: | 289-461 |
| Cow position: | chr3:4861624-4861451 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 54, 29 |
| Conread position: | 289-503 |
| Cow position: | chr3:23478167-23477955 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 181, 60 |
| Conread position: | 289-517 |
| Cow position: | chr3:13577248-13577477 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 24, 69 |
| Conread position: | 289-550 |
| Cow position: | chr3:7678608-7678351 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 18, 8 |
| Conread position: | 289-583 |
| Cow position: | chr3:5100826-5101118 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 119 |
| Conread position: | 289-635 |
| Cow position: | chr3:58540586-58540950 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 24, 200 |
| Conread position: | 289-638 |
| Cow position: | chr3:22872106-22872464 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 227 |
| Conread position: | 294-515 |
| Cow position: | chr3:67744691-67744920 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 19, 68 |
| Conread position: | 295-550 |
| Cow position: | chr3:83921132-83920876 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 295-639 |
| Cow position: | chr3:45881838-45881490 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 296-516 |
| Cow position: | chr3:11949422-11949646 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 64 |
| Conread position: | 298-577 |
| Cow position: | chr3:61361338-61361065 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 14, 110 |
| Conread position: | 298-638 |
| Cow position: | chr3:58951547-58951207 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 32 |
| Conread position: | 299-528 |
| Cow position: | chr3:19198601-19198378 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 18 |
| Conread position: | 302-638 |
| Cow position: | chr3:79902434-79902089 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 212 |
| Conread position: | 303-480 |
| Cow position: | chr3:23270021-23269846 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 15 |
| Conread position: | 303-510 |
| Cow position: | chr3:61467530-61467322 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 303-578 |
| Cow position: | chr3:53572827-53573103 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 105 |
| Conread position: | 310-513 |
| Cow position: | chr3:56704627-56704827 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 36, 53 |
| Conread position: | 310-643 |
| Cow position: | chr3:31056082-31056421 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 201 |
| Conread position: | 315-503 |
| Cow position: | chr3:18607285-18607088 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 55 |
| Conread position: | 318-632 |
| Cow position: | chr3:16004081-16004392 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 319-621 |
| Cow position: | chr3:48371043-48370734 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 27, 203 |
| Conread position: | 319-621 |
| Cow position: | chr3:70913169-70913478 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 28, 268 |
| Conread position: | 319-635 |
| Cow position: | chr3:74849136-74849450 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 16 |
| Conread position: | 319-638 |
| Cow position: | chr3:8147760-8148077 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 322-607 |
| Cow position: | chr3:58158562-58158836 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 29, 35 |
| Conread position: | 323-502 |
| Cow position: | chr3:61262702-61262524 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 30, 12 |
| Conread position: | 325-622 |
| Cow position: | chr3:55300854-55301148 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 327-620 |
| Cow position: | chr3:75143137-75143427 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 18, 8 |
| Conread position: | 331-638 |
| Cow position: | chr3:51033236-51032931 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 18 |
| Conread position: | 333-623 |
| Cow position: | chr3:74754877-74754584 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 148, 74 |
| Conread position: | 337-598 |
| Cow position: | chr3:79691130-79690879 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 241, 20 |
| Conread position: | 342-513 |
| Cow position: | chr3:49388721-49388552 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 46 |
| Conread position: | 342-613 |
| Cow position: | chr3:31501232-31500965 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 342-639 |
| Cow position: | chr3:65325490-65325796 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 11, 275 |
| Conread position: | 343-511 |
| Cow position: | chr3:59392223-59392395 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 10, 140 |
| Conread position: | 346-623 |
| Cow position: | chr3:37485901-37486187 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 7, 12 |
| Conread position: | 346-635 |
| Cow position: | chr3:56125630-56125326 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 14, 209 |
| Conread position: | 350-593 |
| Cow position: | chr3:41947245-41947484 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 44, 146 |
| Conread position: | 350-635 |
| Cow position: | chr3:39554448-39554725 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 91, 124 |
| Conread position: | 352-637 |
| Cow position: | chr3:6443110-6442822 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 72, 67 |
| Conread position: | 353-635 |
| Cow position: | chr3:47737020-47737298 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 227, 12 |
| Conread position: | 355-623 |
| Cow position: | chr3:34603855-34603585 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 52, 137 |
| Conread position: | 355-636 |
| Cow position: | chr3:19109605-19109327 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 5, 110 |
| Conread position: | 355-638 |
| Cow position: | chr3:52147807-52148089 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 138 |
| Conread position: | 357-635 |
| Cow position: | chr3:62824617-62824894 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 227, 140 |
| Conread position: | 359-516 |
| Cow position: | chr3:202567-202727 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 38, 112 |
| Conread position: | 359-576 |
| Cow position: | chr3:58286034-58286246 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 360-621 |
| Cow position: | chr3:40100808-40101068 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 54, 132 |
| Conread position: | 375-571 |
| Cow position: | chr3:56161155-56160959 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 100, 139 |
| Conread position: | 377-554 |
| Cow position: | chr3:13350762-13350587 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 37, 126 |
| Conread position: | 495-637 |
| Cow position: | chr3:20488712-20488570 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 90, 12 |
| Conread position: | 507-638 |
| Cow position: | chr3:11819674-11819545 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 78, 37 |
Show alignments to all cow chromosomes.