Cow genome map
| Conread name: | Pig3-SRG8014D21 |
| Conread position: | 182-528 |
| Cow position: | chr5:50975997-50975633 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 72, 192 |
| Conread position: | 203-505 |
| Cow position: | chr5:56134892-56135202 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 37 |
| Conread position: | 221-517 |
| Cow position: | chr5:51076587-51076890 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 14, 140 |
| Conread position: | 233-475 |
| Cow position: | chr5:7044661-7044914 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 233-621 |
| Cow position: | chr5:6045338-6044938 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 233-636 |
| Cow position: | chr5:55176937-55176529 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 233-638 |
| Cow position: | chr5:20407634-20408023 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 277 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 233-638 |
| Cow position: | chr5:30487286-30486886 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 53 |
| Conread position: | 237-621 |
| Cow position: | chr5:28927547-28927945 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 129 |
| Conread position: | 237-638 |
| Cow position: | chr5:56524214-56523809 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 6 |
| Conread position: | 238-474 |
| Cow position: | chr5:45409361-45409123 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 74, 51 |
| Conread position: | 238-516 |
| Cow position: | chr5:52000261-51999975 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 75, 46 |
| Conread position: | 238-636 |
| Cow position: | chr5:34115690-34115285 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 14 |
| Conread position: | 239-499 |
| Cow position: | chr5:56820223-56820487 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 74, 46 |
| Conread position: | 240-515 |
| Cow position: | chr5:37713858-37714148 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 240-516 |
| Cow position: | chr5:57626833-57626565 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 23, 44 |
| Conread position: | 240-597 |
| Cow position: | chr5:27102758-27103116 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 66, 80 |
| Conread position: | 240-621 |
| Cow position: | chr5:17028131-17027750 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 240-635 |
| Cow position: | chr5:64823275-64823666 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 281 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 56, 122 |
| Conread position: | 241-423 |
| Cow position: | chr5:35247077-35247262 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 105, 23 |
| Conread position: | 241-475 |
| Cow position: | chr5:8994530-8994769 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 68, 50 |
| Conread position: | 241-480 |
| Cow position: | chr5:51053618-51053855 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 72, 29 |
| Conread position: | 241-482 |
| Cow position: | chr5:40039733-40039981 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 72, 56 |
| Conread position: | 241-490 |
| Cow position: | chr5:49361957-49362209 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 99, 43 |
| Conread position: | 241-502 |
| Cow position: | chr5:3771885-3771616 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 72, 40 |
| Conread position: | 241-513 |
| Cow position: | chr5:58144566-58144847 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 72, 41 |
| Conread position: | 241-515 |
| Cow position: | chr5:72903197-72903467 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 21, 30 |
| Conread position: | 241-516 |
| Cow position: | chr5:1247301-1247031 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 97, 72 |
| Conread position: | 241-556 |
| Cow position: | chr5:63987410-63987729 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 102 |
| Conread position: | 241-577 |
| Cow position: | chr5:6503846-6504169 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 58 |
| Conread position: | 241-621 |
| Cow position: | chr5:32140673-32141047 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 46 |
| Conread position: | 241-623 |
| Cow position: | chr5:39258543-39258204 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 21, 29 |
| Conread position: | 241-635 |
| Cow position: | chr5:18574210-18573808 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 56 |
| Conread position: | 241-635 |
| Cow position: | chr5:24485399-24485772 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 70, 124 |
| Conread position: | 241-636 |
| Cow position: | chr5:10261198-10261605 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 45 |
| Conread position: | 241-636 |
| Cow position: | chr5:59759413-59759030 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 55 |
| Conread position: | 241-637 |
| Cow position: | chr5:3280837-3281231 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 57 |
| Conread position: | 241-638 |
| Cow position: | chr5:2309521-2309946 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 291 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 69, 35 |
| Conread position: | 241-638 |
| Cow position: | chr5:26790420-26790809 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 241-638 |
| Cow position: | chr5:34505891-34506291 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 40 |
| Conread position: | 241-638 |
| Cow position: | chr5:49821177-49820776 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 241-638 |
| Cow position: | chr5:61840223-61839823 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 28 |
| Conread position: | 241-639 |
| Cow position: | chr5:7140071-7140450 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 288 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 72, 56 |
| Conread position: | 241-653 |
| Cow position: | chr5:54311371-54310943 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 41 |
| Conread position: | 242-550 |
| Cow position: | chr5:59297928-59298235 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 21 |
| Conread position: | 243-421 |
| Cow position: | chr5:41486704-41486890 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 69, 39 |
| Conread position: | 243-503 |
| Cow position: | chr5:16937989-16938239 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 109, 39 |
| Conread position: | 243-512 |
| Cow position: | chr5:30638830-30639090 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 102, 41 |
| Conread position: | 243-638 |
| Cow position: | chr5:42777798-42777409 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 273 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 65, 41 |
| Conread position: | 243-640 |
| Cow position: | chr5:37377897-37377501 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 42 |
| Conread position: | 246-567 |
| Cow position: | chr5:59443218-59443544 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 30 |
| Conread position: | 249-638 |
| Cow position: | chr5:52165150-52165544 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 41 |
| Conread position: | 250-467 |
| Cow position: | chr5:34562043-34561813 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 13, 125 |
| Conread position: | 251-635 |
| Cow position: | chr5:40356839-40357249 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 35 |
| Conread position: | 251-636 |
| Cow position: | chr5:41609315-41608950 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 62, 79 |
| Conread position: | 252-439 |
| Cow position: | chr5:30949891-30950087 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 61, 33 |
| Conread position: | 252-458 |
| Cow position: | chr5:17644630-17644842 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 252-462 |
| Cow position: | chr5:69461357-69461144 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 46 |
| Conread position: | 252-485 |
| Cow position: | chr5:4280470-4280251 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 106, 30 |
| Conread position: | 252-486 |
| Cow position: | chr5:62142700-62142456 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 61, 45 |
| Conread position: | 252-515 |
| Cow position: | chr5:34300943-34300682 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 59, 114 |
| Conread position: | 252-515 |
| Cow position: | chr5:40927954-40928216 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 80, 63 |
| Conread position: | 252-516 |
| Cow position: | chr5:37646519-37646796 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 59, 116 |
| Conread position: | 252-531 |
| Cow position: | chr5:9859687-9859977 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 61, 120 |
| Conread position: | 252-532 |
| Cow position: | chr5:65924665-65924959 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 61, 33 |
| Conread position: | 252-542 |
| Cow position: | chr5:71505152-71504849 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 37, 113 |
| Conread position: | 252-551 |
| Cow position: | chr5:31640449-31640150 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 55, 97 |
| Conread position: | 252-603 |
| Cow position: | chr5:65752884-65752529 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 252 |
| Conread position: | 252-621 |
| Cow position: | chr5:32696798-32697145 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 59, 24 |
| Conread position: | 252-621 |
| Cow position: | chr5:44994016-44994393 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 45 |
| Conread position: | 252-635 |
| Cow position: | chr5:68081950-68082320 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 99, 64 |
| Conread position: | 252-636 |
| Cow position: | chr5:67932442-67932827 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 33 |
| Conread position: | 252-637 |
| Cow position: | chr5:9089999-9090369 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 252-637 |
| Cow position: | chr5:57935084-57935477 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 37 |
| Conread position: | 252-638 |
| Cow position: | chr5:28224477-28224095 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 30 |
| Conread position: | 252-638 |
| Cow position: | chr5:50821807-50821423 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 253-499 |
| Cow position: | chr5:1766326-1766572 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 60, 32 |
| Conread position: | 253-639 |
| Cow position: | chr5:12322781-12323160 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 61 |
| Conread position: | 254-438 |
| Cow position: | chr5:30629137-30629324 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 59, 30 |
| Conread position: | 254-501 |
| Cow position: | chr5:56070881-56070624 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 59, 230 |
| Conread position: | 254-541 |
| Cow position: | chr5:63992150-63992431 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 59, 29 |
| Conread position: | 254-638 |
| Cow position: | chr5:21617480-21617100 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 22 |
| Conread position: | 254-638 |
| Cow position: | chr5:25230985-25231373 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 280 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 22, 44 |
| Conread position: | 261-637 |
| Cow position: | chr5:41522787-41523151 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 9 |
| Conread position: | 267-506 |
| Cow position: | chr5:24996213-24996458 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 46, 8 |
| Conread position: | 267-605 |
| Cow position: | chr5:45225812-45226162 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 183 |
| Conread position: | 270-465 |
| Cow position: | chr5:74019764-74019964 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 270-636 |
| Cow position: | chr5:39094564-39094191 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 162 |
| Conread position: | 275-621 |
| Cow position: | chr5:64844127-64844465 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 284-529 |
| Cow position: | chr5:6575596-6575837 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 40 |
| Conread position: | 285-470 |
| Cow position: | chr5:75230672-75230485 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 121 |
| Conread position: | 285-507 |
| Cow position: | chr5:45037015-45036785 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 28, 199 |
| Conread position: | 285-518 |
| Cow position: | chr5:16668555-16668330 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 224, 63 |
| Conread position: | 285-560 |
| Cow position: | chr5:57327791-57327502 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 28, 235 |
| Conread position: | 286-500 |
| Cow position: | chr5:71454610-71454824 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 25, 50 |
| Conread position: | 286-605 |
| Cow position: | chr5:43858442-43858761 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 122 |
| Conread position: | 289-638 |
| Cow position: | chr5:58856094-58855739 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 196 |
| Conread position: | 291-640 |
| Cow position: | chr5:41469795-41469440 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 15, 218 |
| Conread position: | 292-482 |
| Cow position: | chr5:57737091-57736904 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 21, 47 |
| Conread position: | 294-638 |
| Cow position: | chr5:4710162-4710509 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 19, 84 |
| Conread position: | 295-501 |
| Cow position: | chr5:54530961-54530753 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 50, 22 |
| Conread position: | 296-475 |
| Cow position: | chr5:35449230-35449050 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 296-483 |
| Cow position: | chr5:71158278-71158474 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 17, 107 |
| Conread position: | 296-601 |
| Cow position: | chr5:45706029-45705718 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 212 |
| Conread position: | 298-535 |
| Cow position: | chr5:63388775-63388535 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 15, 71 |
| Conread position: | 300-550 |
| Cow position: | chr5:40889306-40889559 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 210 |
| Conread position: | 301-635 |
| Cow position: | chr5:41952839-41953169 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 19 |
| Conread position: | 302-529 |
| Cow position: | chr5:61656582-61656351 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 11, 208 |
| Conread position: | 302-639 |
| Cow position: | chr5:47559559-47559902 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 213 |
| Conread position: | 305-623 |
| Cow position: | chr5:32378827-32378522 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 8, 79 |
| Conread position: | 310-483 |
| Cow position: | chr5:47547752-47547928 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 36, 9 |
| Conread position: | 314-458 |
| Cow position: | chr5:12820275-12820131 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 91 |
| Conread position: | 314-515 |
| Cow position: | chr5:24642764-24642965 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 31, 49 |
| Conread position: | 316-487 |
| Cow position: | chr5:33537841-33537675 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 317-493 |
| Cow position: | chr5:5848237-5848408 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 19 |
| Conread position: | 318-509 |
| Cow position: | chr5:68715787-68715596 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 318-623 |
| Cow position: | chr5:46103982-46104290 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 319-530 |
| Cow position: | chr5:64176160-64176377 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 26, 51 |
| Conread position: | 319-623 |
| Cow position: | chr5:14415736-14415420 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 27, 122 |
| Conread position: | 319-637 |
| Cow position: | chr5:39675493-39675812 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 26, 48 |
| Conread position: | 323-488 |
| Cow position: | chr5:66280838-66281009 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 48 |
| Conread position: | 327-515 |
| Cow position: | chr5:24837003-24837183 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 327-621 |
| Cow position: | chr5:32342450-32342747 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 28, 132 |
| Conread position: | 331-621 |
| Cow position: | chr5:57365134-57365415 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 332-540 |
| Cow position: | chr5:45191849-45192059 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 338-640 |
| Cow position: | chr5:18404140-18404447 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 9, 151 |
| Conread position: | 342-510 |
| Cow position: | chr5:61455689-61455516 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 343-473 |
| Cow position: | chr5:9390468-9390334 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 343-620 |
| Cow position: | chr5:28035639-28035376 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 234, 160 |
| Conread position: | 352-559 |
| Cow position: | chr5:57830083-57830292 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 45, 160 |
| Conread position: | 356-621 |
| Cow position: | chr5:46023263-46023525 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 356-622 |
| Cow position: | chr5:46080341-46080604 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 37 |
| Conread position: | 357-628 |
| Cow position: | chr5:63967732-63967996 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 223, 88 |
| Conread position: | 358-619 |
| Cow position: | chr5:41604529-41604264 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 64, 165 |
| Conread position: | 358-639 |
| Cow position: | chr5:48804504-48804787 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 46, 147 |
| Conread position: | 375-511 |
| Cow position: | chr5:60183422-60183288 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 115, 0 |
Show alignments to all cow chromosomes.