Cow genome map

Conread name: Pig3-SRG8014D21

Conread position: 162-638
Cow position: chrX:38439597-38439112 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 205

Conread position: 185-638
Cow position: chrX:12249894-12249437 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 42

Conread position: 191-511
Cow position: chrX:44053348-44053020 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 50, 98

Conread position: 202-637
Cow position: chrX:10437594-10438014 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 9

Conread position: 231-634
Cow position: chrX:10302387-10301985 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 269
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 107

Conread position: 233-470
Cow position: chrX:36961686-36961438 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 9, 44

Conread position: 233-638
Cow position: chrX:45502191-45501784 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 49

Conread position: 237-556
Cow position: chrX:42875024-42874697 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 46

Conread position: 237-607
Cow position: chrX:10411945-10412320 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 46

Conread position: 238-494
Cow position: chrX:11633721-11633457 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 75, 47

Conread position: 239-455
Cow position: chrX:32821067-32820847 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 74, 43

Conread position: 240-492
Cow position: chrX:20791778-20792037 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 172
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 240-493
Cow position: chrX:9041207-9041449 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 107, 49

Conread position: 240-494
Cow position: chrX:23091907-23091660 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 7

Conread position: 240-515
Cow position: chrX:11455005-11455294 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 219

Conread position: 240-515
Cow position: chrX:38935318-38935039 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 72, 49

Conread position: 240-581
Cow position: chrX:11313743-11314084 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 232
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 71, 116

Conread position: 240-583
Cow position: chrX:20710111-20709767 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 71, 12

Conread position: 240-620
Cow position: chrX:31260582-31260979 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 137

Conread position: 240-621
Cow position: chrX:48248861-48248474 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 270
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 107, 20

Conread position: 241-405
Cow position: chrX:37986266-37986101 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 11

Conread position: 241-437
Cow position: chrX:27228162-27227962 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 33

Conread position: 241-470
Cow position: chrX:33000941-33000706 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 48

Conread position: 241-472
Cow position: chrX:47302841-47303079 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 41

Conread position: 241-475
Cow position: chrX:36356148-36355921 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 41

Conread position: 241-483
Cow position: chrX:27175039-27174785 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 60, 0

Conread position: 241-484
Cow position: chrX:3579980-3579735 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 79, 41

Conread position: 241-495
Cow position: chrX:1503375-1503117 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 72, 122

Conread position: 241-496
Cow position: chrX:6488615-6488363 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 72, 43

Conread position: 241-496
Cow position: chrX:29509402-29509667 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 15, 28

Conread position: 241-505
Cow position: chrX:6278462-6278738 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 44

Conread position: 241-514
Cow position: chrX:16416545-16416267 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 69, 29

Conread position: 241-515
Cow position: chrX:9954175-9953899 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 102, 45

Conread position: 241-515
Cow position: chrX:21004720-21004442 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 71, 124

Conread position: 241-516
Cow position: chrX:27771929-27772199 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 70, 44

Conread position: 241-522
Cow position: chrX:9416648-9416943 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 219
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 21, 11

Conread position: 241-534
Cow position: chrX:27508986-27509279 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 72, 55

Conread position: 241-555
Cow position: chrX:9997298-9997611 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 41

Conread position: 241-583
Cow position: chrX:14925036-14924692 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 13

Conread position: 241-583
Cow position: chrX:47873300-47873649 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 41

Conread position: 241-626
Cow position: chrX:15139511-15139901 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 275
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 69, 41

Conread position: 241-634
Cow position: chrX:24287895-24288273 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 277
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 101, 47

Conread position: 241-638
Cow position: chrX:5872353-5871949 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 39

Conread position: 241-638
Cow position: chrX:10831454-10831876 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 124

Conread position: 241-638
Cow position: chrX:11082586-11082978 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 43

Conread position: 241-638
Cow position: chrX:14599573-14599172 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 282
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 65

Conread position: 241-638
Cow position: chrX:17498121-17497732 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 44

Conread position: 241-638
Cow position: chrX:24105660-24105263 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 48

Conread position: 242-515
Cow position: chrX:34543819-34543545 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 74

Conread position: 242-601
Cow position: chrX:34270437-34270090 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 233
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 67, 40

Conread position: 242-639
Cow position: chrX:42461709-42462113 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 37

Conread position: 243-480
Cow position: chrX:46587856-46587611 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 70, 42

Conread position: 243-485
Cow position: chrX:9425709-9425953 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 68, 45

Conread position: 243-515
Cow position: chrX:21672588-21672309 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 70, 32

Conread position: 243-524
Cow position: chrX:40116451-40116175 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 103, 39

Conread position: 243-574
Cow position: chrX:35273399-35273045 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 249
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 8, 107

Conread position: 245-471
Cow position: chrX:47300871-47301102 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 37

Conread position: 251-636
Cow position: chrX:34441422-34441809 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 212

Conread position: 252-462
Cow position: chrX:31312054-31311836 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 29

Conread position: 252-495
Cow position: chrX:12979809-12980053 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 59, 71

Conread position: 252-505
Cow position: chrX:13382356-13382092 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 32

Conread position: 252-511
Cow position: chrX:41166937-41167202 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 61, 30

Conread position: 252-512
Cow position: chrX:27680423-27680164 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 110

Conread position: 252-514
Cow position: chrX:38642274-38642019 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 168, 32

Conread position: 252-515
Cow position: chrX:23970404-23970147 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 59, 82

Conread position: 252-515
Cow position: chrX:26875856-26876123 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 33, 38

Conread position: 252-516
Cow position: chrX:23513990-23514261 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 59, 32

Conread position: 252-545
Cow position: chrX:17726000-17725708 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 61, 37

Conread position: 252-613
Cow position: chrX:31442804-31443160 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 45

Conread position: 252-614
Cow position: chrX:6234425-6234775 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 30

Conread position: 252-621
Cow position: chrX:31436499-31436133 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 32

Conread position: 252-621
Cow position: chrX:34402025-34401651 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 18

Conread position: 252-623
Cow position: chrX:32310130-32309752 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 261
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 38, 19

Conread position: 252-635
Cow position: chrX:5118477-5118844 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 36

Conread position: 252-638
Cow position: chrX:878355-878734 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 86

Conread position: 252-638
Cow position: chrX:7695776-7695400 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 33

Conread position: 252-638
Cow position: chrX:8797281-8796887 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 236

Conread position: 252-638
Cow position: chrX:13785335-13785742 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 287
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 59, 121

Conread position: 252-652
Cow position: chrX:11717758-11718156 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 119

Conread position: 254-511
Cow position: chrX:9635167-9635419 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 94, 16

Conread position: 254-517
Cow position: chrX:17630780-17631048 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 18

Conread position: 254-593
Cow position: chrX:34991059-34990721 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 152

Conread position: 254-638
Cow position: chrX:14883934-14884326 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 12

Conread position: 254-638
Cow position: chrX:42994636-42994250 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 32

Conread position: 257-638
Cow position: chrX:37232433-37232047 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 25

Conread position: 267-568
Cow position: chrX:25238185-25237885 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 56

Conread position: 268-484
Cow position: chrX:29542208-29542430 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 21

Conread position: 268-502
Cow position: chrX:1728417-1728646 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 14

Conread position: 268-510
Cow position: chrX:42588656-42588908 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 25

Conread position: 270-638
Cow position: chrX:41743921-41743549 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 15

Conread position: 271-638
Cow position: chrX:3653767-3653401 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 14

Conread position: 272-583
Cow position: chrX:25713799-25713501 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 48

Conread position: 272-621
Cow position: chrX:25419149-25419507 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 217

Conread position: 272-637
Cow position: chrX:42587419-42587792 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 257
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 9, 89

Conread position: 274-638
Cow position: chrX:11656098-11655714 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 101

Conread position: 274-638
Cow position: chrX:42086863-42086498 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 71

Conread position: 275-454
Cow position: chrX:7336833-7336645 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 30

Conread position: 275-517
Cow position: chrX:35284625-35284375 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 38, 130

Conread position: 276-509
Cow position: chrX:11589583-11589828 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 34, 151

Conread position: 277-487
Cow position: chrX:46315374-46315593 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 36, 83

Conread position: 278-471
Cow position: chrX:29544872-29545078 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 152

Conread position: 285-511
Cow position: chrX:19930646-19930419 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 28, 75

Conread position: 285-515
Cow position: chrX:7513505-7513274 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 33

Conread position: 286-515
Cow position: chrX:43049343-43049100 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 286-583
Cow position: chrX:7351295-7350994 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 173

Conread position: 289-607
Cow position: chrX:7646243-7645924 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 8

Conread position: 289-610
Cow position: chrX:42855399-42855073 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 10

Conread position: 289-638
Cow position: chrX:21665603-21665955 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 195

Conread position: 294-507
Cow position: chrX:38549433-38549214 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 19, 63

Conread position: 294-550
Cow position: chrX:47191425-47191670 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 23

Conread position: 295-500
Cow position: chrX:48684239-48684450 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 15, 116

Conread position: 296-472
Cow position: chrX:4091632-4091448 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 121

Conread position: 296-551
Cow position: chrX:7497224-7496973 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 10, 63

Conread position: 296-607
Cow position: chrX:15545876-15545563 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 30

Conread position: 296-634
Cow position: chrX:4632867-4633211 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 126

Conread position: 296-635
Cow position: chrX:40452225-40452574 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 68

Conread position: 297-575
Cow position: chrX:33020467-33020186 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 186

Conread position: 298-633
Cow position: chrX:37843703-37843361 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 214

Conread position: 300-515
Cow position: chrX:25411821-25411598 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 84

Conread position: 308-462
Cow position: chrX:23785631-23785464 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 310-572
Cow position: chrX:43984145-43983873 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 36, 170

Conread position: 316-480
Cow position: chrX:16996463-16996300 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 89

Conread position: 318-635
Cow position: chrX:11806054-11806377 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 233
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 22, 52

Conread position: 318-636
Cow position: chrX:13177509-13177819 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 25, 49

Conread position: 318-637
Cow position: chrX:48227657-48227982 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 214
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 0

Conread position: 320-620
Cow position: chrX:24201138-24200852 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 263, 15

Conread position: 320-621
Cow position: chrX:35632800-35633100 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 34, 19

Conread position: 323-635
Cow position: chrX:28111461-28111137 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 225
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 285

Conread position: 323-638
Cow position: chrX:45430062-45430383 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 47

Conread position: 327-568
Cow position: chrX:6607366-6607116 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 90, 13

Conread position: 328-635
Cow position: chrX:32978308-32978618 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 38

Conread position: 342-516
Cow position: chrX:6640061-6639881 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 342-529
Cow position: chrX:48536731-48536920 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 11, 16

Conread position: 342-613
Cow position: chrX:7053799-7054075 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 11, 79

Conread position: 346-548
Cow position: chrX:16531928-16531726 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 163
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 7, 134

Conread position: 347-643
Cow position: chrX:25283224-25283510 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 54

Conread position: 350-502
Cow position: chrX:18812176-18812029 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 5, 0

Conread position: 350-635
Cow position: chrX:33827096-33827393 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 201
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 71, 5

Conread position: 352-639
Cow position: chrX:16078584-16078303 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 233, 35

Conread position: 359-582
Cow position: chrX:38794643-38794418 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 123, 115

Conread position: 359-634
Cow position: chrX:46447914-46448189 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 219, 108

Conread position: 359-635
Cow position: chrX:40142283-40142555 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 58, 93

Conread position: 360-634
Cow position: chrX:13068824-13069099 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 183
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 91, 145

Conread position: 361-513
Cow position: chrX:29925668-29925818 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 0

Show alignments to all cow chromosomes.