• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Pig3-SRG8015N22
        

               
Conread position:
               
90-383
               

               
Cow position:
               
chr13:10859585-10859879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
122-591
               

               
Cow position:
               
chr13:12202715-12202240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 133
               

               
Conread position:
               
135-684
               

               
Cow position:
               
chr13:35660081-35659537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
359, 36
               

               
Conread position:
               
146-683
               

               
Cow position:
               
chr13:23960488-23961023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 69
               

               
Conread position:
               
149-618
               

               
Cow position:
               
chr13:23166781-23167250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 98
               

               
Conread position:
               
154-431
               

               
Cow position:
               
chr13:2113997-2113716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
154-562
               

               
Cow position:
               
chr13:11954814-11955210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 55
               

               
Conread position:
               
155-520
               

               
Cow position:
               
chr13:1780145-1779777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 177
               

               
Conread position:
               
159-683
               

               
Cow position:
               
chr13:42200930-42200404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 94
               

               
Conread position:
               
159-684
               

               
Cow position:
               
chr13:48251686-48252185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 19
               

               
Conread position:
               
164-666
               

               
Cow position:
               
chr13:38012665-38012140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 269
               

               
Conread position:
               
174-693
               

               
Cow position:
               
chr13:43594830-43595331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 5
               

               
Conread position:
               
182-693
               

               
Cow position:
               
chr13:14063247-14063745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 27
               

               
Conread position:
               
187-680
               

               
Cow position:
               
chr13:57769744-57770196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
193-676
               

               
Cow position:
               
chr13:4664591-4665059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
194-443
               

               
Cow position:
               
chr13:1839652-1839404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
194-452
               

               
Cow position:
               
chr13:4604562-4604305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
150, 53
               

               
Conread position:
               
194-527
               

               
Cow position:
               
chr13:30693972-30693655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 127
               

               
Conread position:
               
194-618
               

               
Cow position:
               
chr13:23856484-23856062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 27
               

               
Conread position:
               
195-482
               

               
Cow position:
               
chr13:33517655-33517939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 15
               

               
Conread position:
               
195-597
               

               
Cow position:
               
chr13:12614530-12614125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 117
               

               
Conread position:
               
195-673
               

               
Cow position:
               
chr13:15974878-15974412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 27
               

               
Conread position:
               
195-676
               

               
Cow position:
               
chr13:25927062-25926579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 135
               

               
Conread position:
               
196-626
               

               
Cow position:
               
chr13:1959278-1958851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 118
               

               
Conread position:
               
201-445
               

               
Cow position:
               
chr13:5713558-5713321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
229, 119
               

               
Conread position:
               
207-556
               

               
Cow position:
               
chr13:61166199-61166537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 88
               

               
Conread position:
               
207-626
               

               
Cow position:
               
chr13:33282271-33281849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
137, 40
               

               
Conread position:
               
209-697
               

               
Cow position:
               
chr13:38283728-38284201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 193
               

               
Conread position:
               
210-627
               

               
Cow position:
               
chr13:16024843-16024420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 37
               

               
Conread position:
               
211-597
               

               
Cow position:
               
chr13:15884762-15885148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 11
               

               
Conread position:
               
211-609
               

               
Cow position:
               
chr13:13766019-13765650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
212-484
               

               
Cow position:
               
chr13:54237595-54237338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
212-555
               

               
Cow position:
               
chr13:25062663-25062327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 213
               

               
Conread position:
               
212-597
               

               
Cow position:
               
chr13:31814120-31813747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
212-680
               

               
Cow position:
               
chr13:21276108-21275643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 110
               

               
Conread position:
               
212-685
               

               
Cow position:
               
chr13:17291878-17292346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
212-697
               

               
Cow position:
               
chr13:18989958-18989495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 89
               

               
Conread position:
               
213-526
               

               
Cow position:
               
chr13:29814792-29814480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
130, 18
               

               
Conread position:
               
214-403
               

               
Cow position:
               
chr13:47599619-47599443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
98, 33
               

               
Conread position:
               
214-412
               

               
Cow position:
               
chr13:15162418-15162604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
160, 22
               

               
Conread position:
               
214-432
               

               
Cow position:
               
chr13:5498065-5497845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 43
               

               
Conread position:
               
214-432
               

               
Cow position:
               
chr13:8473226-8473004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
52, 43
               

               
Conread position:
               
214-434
               

               
Cow position:
               
chr13:20683197-20682976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
130, 80
               

               
Conread position:
               
214-441
               

               
Cow position:
               
chr13:3003698-3003466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
214-445
               

               
Cow position:
               
chr13:24931081-24930845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
214-452
               

               
Cow position:
               
chr13:6945624-6945381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
93, 216
               

               
Conread position:
               
214-452
               

               
Cow position:
               
chr13:15740317-15740078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 46
               

               
Conread position:
               
214-455
               

               
Cow position:
               
chr13:6606769-6607013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
38, 99
               

               
Conread position:
               
214-457
               

               
Cow position:
               
chr13:16270186-16269932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
130, 74
               

               
Conread position:
               
214-461
               

               
Cow position:
               
chr13:17886752-17886516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
134, 155
               

               
Conread position:
               
214-466
               

               
Cow position:
               
chr13:54381684-54381935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
214-489
               

               
Cow position:
               
chr13:20863770-20864036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
214-494
               

               
Cow position:
               
chr13:13266052-13265781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 32
               

               
Conread position:
               
214-501
               

               
Cow position:
               
chr13:5091410-5091702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 247
               

               
Conread position:
               
214-506
               

               
Cow position:
               
chr13:12682290-12682584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 197
               

               
Conread position:
               
214-508
               

               
Cow position:
               
chr13:18215680-18215404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
37, 100
               

               
Conread position:
               
214-516
               

               
Cow position:
               
chr13:19178527-19178224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
121, 131
               

               
Conread position:
               
214-519
               

               
Cow position:
               
chr13:670979-671287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
214-524
               

               
Cow position:
               
chr13:13306357-13306036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 219
               

               
Conread position:
               
214-541
               

               
Cow position:
               
chr13:55295375-55295698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 33
               

               
Conread position:
               
214-550
               

               
Cow position:
               
chr13:30651426-30651107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 85
               

               
Conread position:
               
214-559
               

               
Cow position:
               
chr13:34035619-34035277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 208
               

               
Conread position:
               
214-560
               

               
Cow position:
               
chr13:34941406-34941741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 33
               

               
Conread position:
               
214-561
               

               
Cow position:
               
chr13:17613597-17613248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 131
               

               
Conread position:
               
214-562
               

               
Cow position:
               
chr13:15234161-15233833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 33
               

               
Conread position:
               
214-585
               

               
Cow position:
               
chr13:6153528-6153900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 118
               

               
Conread position:
               
214-590
               

               
Cow position:
               
chr13:43138978-43139335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
128, 43
               

               
Conread position:
               
214-591
               

               
Cow position:
               
chr13:18835437-18835082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 98
               

               
Conread position:
               
214-591
               

               
Cow position:
               
chr13:57493933-57494311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
214-597
               

               
Cow position:
               
chr13:15167069-15166690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 43
               

               
Conread position:
               
214-598
               

               
Cow position:
               
chr13:23269962-23270334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 108
               

               
Conread position:
               
214-601
               

               
Cow position:
               
chr13:11820828-11820465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
275, 22
               

               
Conread position:
               
214-604
               

               
Cow position:
               
chr13:10928739-10929123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 177
               

               
Conread position:
               
214-604
               

               
Cow position:
               
chr13:37981504-37981878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 33
               

               
Conread position:
               
214-615
               

               
Cow position:
               
chr13:40943494-40943095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
214-617
               

               
Cow position:
               
chr13:6086650-6087040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 27
               

               
Conread position:
               
214-617
               

               
Cow position:
               
chr13:12546656-12547056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 32
               

               
Conread position:
               
214-626
               

               
Cow position:
               
chr13:25434878-25435280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 106
               

               
Conread position:
               
214-626
               

               
Cow position:
               
chr13:60967015-60966605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
130, 98
               

               
Conread position:
               
214-636
               

               
Cow position:
               
chr13:23479280-23478865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 93
               

               
Conread position:
               
214-642
               

               
Cow position:
               
chr13:60429828-60430250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 33
               

               
Conread position:
               
214-647
               

               
Cow position:
               
chr13:20666137-20666561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
214-647
               

               
Cow position:
               
chr13:47756626-47756185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 216
               

               
Conread position:
               
214-648
               

               
Cow position:
               
chr13:44626631-44626189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 205
               

               
Conread position:
               
214-674
               

               
Cow position:
               
chr13:971647-972104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 117
               

               
Conread position:
               
214-677
               

               
Cow position:
               
chr13:27525011-27525469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
214-679
               

               
Cow position:
               
chr13:15446297-15445837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 89
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr13:2774372-2773902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 26
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr13:15288674-15289132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr13:16247903-16247431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr13:17855625-17855154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 158
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr13:18166981-18166519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 108
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr13:21287839-21288298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 110
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr13:22085506-22085945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 33
               

               
Conread position:
               
214-681
               

               
Cow position:
               
chr13:13089274-13088818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 33
               

               
Conread position:
               
214-681
               

               
Cow position:
               
chr13:20784839-20784380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 122
               

               
Conread position:
               
214-683
               

               
Cow position:
               
chr13:14544373-14543919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 226
               

               
Conread position:
               
214-683
               

               
Cow position:
               
chr13:34281931-34281465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 228
               

               
Conread position:
               
214-683
               

               
Cow position:
               
chr13:46516316-46515843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 33
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr13:11061235-11060757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr13:12875734-12876195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 86
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr13:25817764-25817312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 98
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr13:41807026-41806559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 33
               

               
Conread position:
               
214-686
               

               
Cow position:
               
chr13:25537892-25537416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 59
               

               
Conread position:
               
214-687
               

               
Cow position:
               
chr13:16015058-16014583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 103
               

               
Conread position:
               
214-687
               

               
Cow position:
               
chr13:42114272-42113793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 110
               

               
Conread position:
               
214-687
               

               
Cow position:
               
chr13:54702441-54701961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 51
               

               
Conread position:
               
214-689
               

               
Cow position:
               
chr13:6974416-6973938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 97
               

               
Conread position:
               
214-693
               

               
Cow position:
               
chr13:10988823-10989299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
214-693
               

               
Cow position:
               
chr13:16292797-16292309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
128, 115
               

               
Conread position:
               
214-693
               

               
Cow position:
               
chr13:60508865-60509348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 113
               

               
Conread position:
               
214-694
               

               
Cow position:
               
chr13:15041221-15041703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 127
               

               
Conread position:
               
214-694
               

               
Cow position:
               
chr13:15872700-15872210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 220
               

               
Conread position:
               
214-694
               

               
Cow position:
               
chr13:41918915-41919390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
150, 26
               

               
Conread position:
               
214-695
               

               
Cow position:
               
chr13:6616497-6616993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 170
               

               
Conread position:
               
214-695
               

               
Cow position:
               
chr13:32017272-32017745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
214-695
               

               
Cow position:
               
chr13:33256747-33256271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 116
               

               
Conread position:
               
214-696
               

               
Cow position:
               
chr13:19023588-19024082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 176
               

               
Conread position:
               
214-696
               

               
Cow position:
               
chr13:51528195-51528665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 122
               

               
Conread position:
               
214-696
               

               
Cow position:
               
chr13:52894393-52893921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 33
               

               
Conread position:
               
214-697
               

               
Cow position:
               
chr13:20378090-20378543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 16
               

               
Conread position:
               
214-697
               

               
Cow position:
               
chr13:32283378-32282895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 83
               

               
Conread position:
               
215-410
               

               
Cow position:
               
chr13:16155468-16155666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 32
               

               
Conread position:
               
215-430
               

               
Cow position:
               
chr13:38485080-38484868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
129, 32
               

               
Conread position:
               
215-438
               

               
Cow position:
               
chr13:1767017-1766798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
175, 28
               

               
Conread position:
               
215-438
               

               
Cow position:
               
chr13:24539745-24539519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
129, 32
               

               
Conread position:
               
215-439
               

               
Cow position:
               
chr13:21210112-21209887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
215-462
               

               
Cow position:
               
chr13:37516886-37517130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 125
               

               
Conread position:
               
215-464
               

               
Cow position:
               
chr13:55843734-55843483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
52, 110
               

               
Conread position:
               
215-465
               

               
Cow position:
               
chr13:34333702-34333937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
181, 32
               

               
Conread position:
               
215-499
               

               
Cow position:
               
chr13:3701682-3701408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
215-570
               

               
Cow position:
               
chr13:18244106-18243761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 105
               

               
Conread position:
               
215-571
               

               
Cow position:
               
chr13:46458868-46458521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
215-592
               

               
Cow position:
               
chr13:4866730-4867094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 65
               

               
Conread position:
               
215-601
               

               
Cow position:
               
chr13:20649733-20650114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
215-601
               

               
Cow position:
               
chr13:48037870-48037491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 94
               

               
Conread position:
               
215-604
               

               
Cow position:
               
chr13:17821010-17821405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 32
               

               
Conread position:
               
215-604
               

               
Cow position:
               
chr13:38277887-38278282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 107
               

               
Conread position:
               
215-604
               

               
Cow position:
               
chr13:43762417-43762034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 107
               

               
Conread position:
               
215-609
               

               
Cow position:
               
chr13:43184623-43185020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
215-611
               

               
Cow position:
               
chr13:45726129-45725744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 32
               

               
Conread position:
               
215-614
               

               
Cow position:
               
chr13:9265568-9265971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 219
               

               
Conread position:
               
215-617
               

               
Cow position:
               
chr13:56148789-56148373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 32
               

               
Conread position:
               
215-617
               

               
Cow position:
               
chr13:56160178-56160594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 32
               

               
Conread position:
               
215-620
               

               
Cow position:
               
chr13:60974325-60973929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 26
               

               
Conread position:
               
215-626
               

               
Cow position:
               
chr13:37484018-37484436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 203
               

               
Conread position:
               
215-629
               

               
Cow position:
               
chr13:40722460-40722870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 57
               

               
Conread position:
               
215-667
               

               
Cow position:
               
chr13:33352115-33352565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 99
               

               
Conread position:
               
215-676
               

               
Cow position:
               
chr13:20270966-20271440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 32
               

               
Conread position:
               
215-679
               

               
Cow position:
               
chr13:34728589-34729053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 28
               

               
Conread position:
               
215-680
               

               
Cow position:
               
chr13:20683873-20684364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 43
               

               
Conread position:
               
215-680
               

               
Cow position:
               
chr13:20820591-20821050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 32
               

               
Conread position:
               
215-680
               

               
Cow position:
               
chr13:26261544-26262005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 237
               

               
Conread position:
               
215-680
               

               
Cow position:
               
chr13:37985499-37985961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
215-681
               

               
Cow position:
               
chr13:20174989-20174523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 85
               

               
Conread position:
               
215-684
               

               
Cow position:
               
chr13:9142532-9142056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 32
               

               
Conread position:
               
215-684
               

               
Cow position:
               
chr13:17158616-17159099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 240
               

               
Conread position:
               
215-684
               

               
Cow position:
               
chr13:24754134-24753676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 101
               

               
Conread position:
               
215-686
               

               
Cow position:
               
chr13:1231898-1231422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 45
               

               
Conread position:
               
215-687
               

               
Cow position:
               
chr13:33875912-33875452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 120
               

               
Conread position:
               
215-688
               

               
Cow position:
               
chr13:54095054-54094595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 32
               

               
Conread position:
               
215-691
               

               
Cow position:
               
chr13:12670195-12670677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 75
               

               
Conread position:
               
215-694
               

               
Cow position:
               
chr13:6079169-6079630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 97
               

               
Conread position:
               
215-694
               

               
Cow position:
               
chr13:61976715-61977186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 46
               

               
Conread position:
               
215-696
               

               
Cow position:
               
chr13:45353294-45352795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
215-696
               

               
Cow position:
               
chr13:51940981-51940515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
215-697
               

               
Cow position:
               
chr13:6189383-6189829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 20
               

               
Conread position:
               
215-697
               

               
Cow position:
               
chr13:26479964-26480432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 88
               

               
Conread position:
               
216-489
               

               
Cow position:
               
chr13:25248895-25249178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
115, 45
               

               
Conread position:
               
216-555
               

               
Cow position:
               
chr13:34375504-34375173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
216-594
               

               
Cow position:
               
chr13:7663180-7663546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 42
               

               
Conread position:
               
216-614
               

               
Cow position:
               
chr13:1042707-1043107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 326
               

               
Conread position:
               
216-615
               

               
Cow position:
               
chr13:51821637-51822020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 131
               

               
Conread position:
               
216-618
               

               
Cow position:
               
chr13:17800321-17799926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 20
               

               
Conread position:
               
216-618
               

               
Cow position:
               
chr13:37382060-37381652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 241
               

               
Conread position:
               
216-680
               

               
Cow position:
               
chr13:19882787-19883247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
216-684
               

               
Cow position:
               
chr13:4553048-4552609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 72
               

               
Conread position:
               
216-684
               

               
Cow position:
               
chr13:24715486-24715032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 42
               

               
Conread position:
               
216-686
               

               
Cow position:
               
chr13:21235436-21235887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 106
               

               
Conread position:
               
216-691
               

               
Cow position:
               
chr13:52199338-52198881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
216-695
               

               
Cow position:
               
chr13:8362497-8362972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 201
               

               
Conread position:
               
217-424
               

               
Cow position:
               
chr13:14927487-14927277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
217-541
               

               
Cow position:
               
chr13:21155241-21155574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 299
               

               
Conread position:
               
217-577
               

               
Cow position:
               
chr13:8201237-8201591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 42
               

               
Conread position:
               
217-597
               

               
Cow position:
               
chr13:9803305-9802939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
158, 37
               

               
Conread position:
               
217-600
               

               
Cow position:
               
chr13:11460871-11460502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 30
               

               
Conread position:
               
217-612
               

               
Cow position:
               
chr13:20563246-20562850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 115
               

               
Conread position:
               
217-621
               

               
Cow position:
               
chr13:46311788-46312163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
277, 44
               

               
Conread position:
               
217-641
               

               
Cow position:
               
chr13:52057791-52057389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 104
               

               
Conread position:
               
217-684
               

               
Cow position:
               
chr13:35525966-35526411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 98
               

               
Conread position:
               
217-697
               

               
Cow position:
               
chr13:37069597-37069113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 105
               

               
Conread position:
               
218-524
               

               
Cow position:
               
chr13:37521133-37521432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 102
               

               
Conread position:
               
218-550
               

               
Cow position:
               
chr13:60599695-60600012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 109
               

               
Conread position:
               
218-695
               

               
Cow position:
               
chr13:17021473-17021951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 231
               

               
Conread position:
               
220-524
               

               
Cow position:
               
chr13:2462988-2463291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
112, 6
               

               
Conread position:
               
220-553
               

               
Cow position:
               
chr13:53536061-53536392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
133, 27
               

               
Conread position:
               
221-489
               

               
Cow position:
               
chr13:54093986-54093725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 101
               

               
Conread position:
               
221-626
               

               
Cow position:
               
chr13:20466051-20466442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 31
               

               
Conread position:
               
221-697
               

               
Cow position:
               
chr13:17114136-17114612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 60
               

               
Conread position:
               
222-487
               

               
Cow position:
               
chr13:20041714-20041988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 98
               

               
Conread position:
               
222-598
               

               
Cow position:
               
chr13:22886749-22887118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
122, 93
               

               
Conread position:
               
222-685
               

               
Cow position:
               
chr13:15622050-15621591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
131, 59
               

               
Conread position:
               
222-689
               

               
Cow position:
               
chr13:46525200-46525651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 36
               

               
Conread position:
               
223-445
               

               
Cow position:
               
chr13:61170474-61170700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 24
               

               
Conread position:
               
224-603
               

               
Cow position:
               
chr13:13176890-13176513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 71
               

               
Conread position:
               
224-676
               

               
Cow position:
               
chr13:24586288-24585839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 169
               

               
Conread position:
               
225-401
               

               
Cow position:
               
chr13:27985189-27985364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
225-421
               

               
Cow position:
               
chr13:58743032-58743244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 126
               

               
Conread position:
               
225-428
               

               
Cow position:
               
chr13:33900685-33900874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
225-436
               

               
Cow position:
               
chr13:46636891-46637092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 66
               

               
Conread position:
               
225-462
               

               
Cow position:
               
chr13:30510301-30510063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
27, 158
               

               
Conread position:
               
225-466
               

               
Cow position:
               
chr13:54418472-54418223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
117, 87
               

               
Conread position:
               
225-474
               

               
Cow position:
               
chr13:32717631-32717882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 92
               

               
Conread position:
               
225-483
               

               
Cow position:
               
chr13:15172167-15172428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 217
               

               
Conread position:
               
225-489
               

               
Cow position:
               
chr13:5752183-5752448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 112
               

               
Conread position:
               
225-494
               

               
Cow position:
               
chr13:25261567-25261837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 174
               

               
Conread position:
               
225-514
               

               
Cow position:
               
chr13:52922328-52922049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 68
               

               
Conread position:
               
225-524
               

               
Cow position:
               
chr13:60487216-60487516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
119, 227
               

               
Conread position:
               
225-544
               

               
Cow position:
               
chr13:24376730-24376418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 165
               

               
Conread position:
               
225-571
               

               
Cow position:
               
chr13:25531552-25531892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 15
               

               
Conread position:
               
225-572
               

               
Cow position:
               
chr13:29631092-29630754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
115, 32
               

               
Conread position:
               
225-582
               

               
Cow position:
               
chr13:18351080-18350723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
123, 82
               

               
Conread position:
               
225-585
               

               
Cow position:
               
chr13:17622524-17622173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 71
               

               
Conread position:
               
225-589
               

               
Cow position:
               
chr13:889939-890293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 82
               

               
Conread position:
               
225-597
               

               
Cow position:
               
chr13:54331259-54330889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 183
               

               
Conread position:
               
225-599
               

               
Cow position:
               
chr13:21176084-21176449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
225-602
               

               
Cow position:
               
chr13:50681569-50681946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
225-604
               

               
Cow position:
               
chr13:13501382-13501752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 38
               

               
Conread position:
               
225-610
               

               
Cow position:
               
chr13:28683598-28683221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 22
               

               
Conread position:
               
225-610
               

               
Cow position:
               
chr13:52585781-52586179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 22
               

               
Conread position:
               
225-615
               

               
Cow position:
               
chr13:7076496-7076111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 82
               

               
Conread position:
               
225-615
               

               
Cow position:
               
chr13:20705963-20706351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 26
               

               
Conread position:
               
225-620
               

               
Cow position:
               
chr13:46182023-46181646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 15
               

               
Conread position:
               
225-627
               

               
Cow position:
               
chr13:53566836-53566443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
225-666
               

               
Cow position:
               
chr13:24155780-24155311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 22
               

               
Conread position:
               
225-679
               

               
Cow position:
               
chr13:311670-311220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 83
               

               
Conread position:
               
225-680
               

               
Cow position:
               
chr13:22115943-22115462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 22
               

               
Conread position:
               
225-680
               

               
Cow position:
               
chr13:55673965-55674423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 216
               

               
Conread position:
               
225-684
               

               
Cow position:
               
chr13:3315433-3315903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 132
               

               
Conread position:
               
225-684
               

               
Cow position:
               
chr13:10924666-10925142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 52
               

               
Conread position:
               
225-684
               

               
Cow position:
               
chr13:19610339-19610783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 27
               

               
Conread position:
               
225-686
               

               
Cow position:
               
chr13:12990085-12989643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
225-688
               

               
Cow position:
               
chr13:20880686-20881144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 85
               

               
Conread position:
               
225-689
               

               
Cow position:
               
chr13:42860330-42860788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
119, 147
               

               
Conread position:
               
225-692
               

               
Cow position:
               
chr13:25695528-25695992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 97
               

               
Conread position:
               
225-693
               

               
Cow position:
               
chr13:21107364-21106920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 46
               

               
Conread position:
               
225-694
               

               
Cow position:
               
chr13:11821380-11820933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
37, 7
               

               
Conread position:
               
225-695
               

               
Cow position:
               
chr13:17970795-17971266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 22
               

               
Conread position:
               
225-697
               

               
Cow position:
               
chr13:9587344-9587814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
225-697
               

               
Cow position:
               
chr13:11808782-11808357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 31
               

               
Conread position:
               
225-697
               

               
Cow position:
               
chr13:20879595-20880056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 44
               

               
Conread position:
               
225-697
               

               
Cow position:
               
chr13:38872732-38873183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
206, 95
               

               
Conread position:
               
225-697
               

               
Cow position:
               
chr13:44323143-44322663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 185
               

               
Conread position:
               
225-697
               

               
Cow position:
               
chr13:45022968-45023448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 204
               

               
Conread position:
               
226-462
               

               
Cow position:
               
chr13:8607280-8607514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 46
               

               
Conread position:
               
226-489
               

               
Cow position:
               
chr13:24060112-24060356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
226-588
               

               
Cow position:
               
chr13:8524382-8524742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 84
               

               
Conread position:
               
226-602
               

               
Cow position:
               
chr13:16343925-16343562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
118, 50
               

               
Conread position:
               
226-618
               

               
Cow position:
               
chr13:2414264-2413880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 21
               

               
Conread position:
               
226-626
               

               
Cow position:
               
chr13:43194414-43194012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 104
               

               
Conread position:
               
226-645
               

               
Cow position:
               
chr13:13261247-13260826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 230
               

               
Conread position:
               
226-684
               

               
Cow position:
               
chr13:38329869-38329400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 317
               

               
Conread position:
               
226-684
               

               
Cow position:
               
chr13:56686666-56686226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 83
               

               
Conread position:
               
226-697
               

               
Cow position:
               
chr13:11260491-11260047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 33
               

               
Conread position:
               
227-438
               

               
Cow position:
               
chr13:46501542-46501329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
108, 115
               

               
Conread position:
               
227-446
               

               
Cow position:
               
chr13:46985251-46985036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
227-524
               

               
Cow position:
               
chr13:41253852-41253565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
267, 20
               

               
Conread position:
               
227-588
               

               
Cow position:
               
chr13:6060770-6061127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 20
               

               
Conread position:
               
227-608
               

               
Cow position:
               
chr13:39952175-39952553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
85, 20
               

               
Conread position:
               
227-617
               

               
Cow position:
               
chr13:56154923-56155299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 87
               

               
Conread position:
               
227-669
               

               
Cow position:
               
chr13:15869357-15868907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 69
               

               
Conread position:
               
227-684
               

               
Cow position:
               
chr13:41154808-41155272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
267, 63
               

               
Conread position:
               
227-693
               

               
Cow position:
               
chr13:12448752-12449207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 20
               

               
Conread position:
               
228-550
               

               
Cow position:
               
chr13:46324551-46324870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
228-652
               

               
Cow position:
               
chr13:25547356-25547766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 84
               

               
Conread position:
               
228-683
               

               
Cow position:
               
chr13:12283072-12282621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 19
               

               
Conread position:
               
228-695
               

               
Cow position:
               
chr13:21241855-21242302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 88
               

               
Conread position:
               
229-466
               

               
Cow position:
               
chr13:34556096-34556333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
16, 104
               

               
Conread position:
               
229-474
               

               
Cow position:
               
chr13:17816007-17815759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 106
               

               
Conread position:
               
229-612
               

               
Cow position:
               
chr13:46736437-46736074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
103, 71
               

               
Conread position:
               
229-641
               

               
Cow position:
               
chr13:34263137-34263541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 83
               

               
Conread position:
               
229-642
               

               
Cow position:
               
chr13:55315953-55316371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 78
               

               
Conread position:
               
229-676
               

               
Cow position:
               
chr13:19393523-19393087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 106
               

               
Conread position:
               
229-684
               

               
Cow position:
               
chr13:23667498-23667040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
230-436
               

               
Cow position:
               
chr13:18551683-18551474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
112, 99
               

               
Conread position:
               
231-692
               

               
Cow position:
               
chr13:9974833-9975293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 202
               

               
Conread position:
               
233-691
               

               
Cow position:
               
chr13:24369817-24369364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 171
               

               
Conread position:
               
234-498
               

               
Cow position:
               
chr13:51108720-51108462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
131, 20
               

               
Conread position:
               
234-692
               

               
Cow position:
               
chr13:20497883-20497417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 73
               

               
Conread position:
               
234-697
               

               
Cow position:
               
chr13:49805205-49804757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 16
               

               
Conread position:
               
235-428
               

               
Cow position:
               
chr13:52197870-52197675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
235-602
               

               
Cow position:
               
chr13:12207273-12206916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 105
               

               
Conread position:
               
236-692
               

               
Cow position:
               
chr13:43480290-43479835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 206
               

               
Conread position:
               
237-446
               

               
Cow position:
               
chr13:6602983-6603194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
70, 186
               

               
Conread position:
               
238-412
               

               
Cow position:
               
chr13:37947784-37947949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
131, 39
               

               
Conread position:
               
238-418
               

               
Cow position:
               
chr13:57323681-57323502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
101, 35
               

               
Conread position:
               
238-480
               

               
Cow position:
               
chr13:37945989-37946218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
131, 58
               

               
Conread position:
               
238-641
               

               
Cow position:
               
chr13:42229554-42229133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
238-642
               

               
Cow position:
               
chr13:17439539-17439942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 215
               

               
Conread position:
               
238-680
               

               
Cow position:
               
chr13:34261459-34261022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 84
               

               
Conread position:
               
239-687
               

               
Cow position:
               
chr13:36877298-36876845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 97
               

               
Conread position:
               
240-617
               

               
Cow position:
               
chr13:185733-185384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
255, 66
               

               
Conread position:
               
241-693
               

               
Cow position:
               
chr13:45073711-45074127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
103, 68
               

               
Conread position:
               
242-431
               

               
Cow position:
               
chr13:18170363-18170552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
101, 75
               

               
Conread position:
               
242-697
               

               
Cow position:
               
chr13:10845816-10845389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 81
               

               
Conread position:
               
243-445
               

               
Cow position:
               
chr13:37980425-37980617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
126, 69
               

               
Conread position:
               
243-445
               

               
Cow position:
               
chr13:48944883-48944691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
121, 69
               

               
Conread position:
               
243-487
               

               
Cow position:
               
chr13:9548913-9548675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
243-487
               

               
Cow position:
               
chr13:20536722-20536485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
243-605
               

               
Cow position:
               
chr13:9593727-9593370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
243-617
               

               
Cow position:
               
chr13:20839790-20839418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 209
               

               
Conread position:
               
243-676
               

               
Cow position:
               
chr13:59170879-59170435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
243-680
               

               
Cow position:
               
chr13:15192672-15193102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 87
               

               
Conread position:
               
243-684
               

               
Cow position:
               
chr13:18852298-18851871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 92
               

               
Conread position:
               
244-432
               

               
Cow position:
               
chr13:22025480-22025675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
44, 86
               

               
Conread position:
               
244-442
               

               
Cow position:
               
chr13:60690501-60690703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
244-541
               

               
Cow position:
               
chr13:37795655-37795386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
100, 65
               

               
Conread position:
               
244-552
               

               
Cow position:
               
chr13:60329971-60329676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
149, 78
               

               
Conread position:
               
244-561
               

               
Cow position:
               
chr13:59687658-59687970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
96, 84
               

               
Conread position:
               
244-618
               

               
Cow position:
               
chr13:20679566-20679190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 64
               

               
Conread position:
               
244-618
               

               
Cow position:
               
chr13:36771204-36771570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 65
               

               
Conread position:
               
244-639
               

               
Cow position:
               
chr13:43919033-43919432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 88
               

               
Conread position:
               
244-676
               

               
Cow position:
               
chr13:13320997-13320588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 39
               

               
Conread position:
               
244-694
               

               
Cow position:
               
chr13:17745460-17745030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 68
               

               
Conread position:
               
244-695
               

               
Cow position:
               
chr13:5263065-5263504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 150
               

               
Conread position:
               
245-697
               

               
Cow position:
               
chr13:19581866-19582310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
5, 48
               

               
Conread position:
               
247-458
               

               
Cow position:
               
chr13:21904880-21904670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
96, 65
               

               
Conread position:
               
247-487
               

               
Cow position:
               
chr13:6975572-6975813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 168
               

               
Conread position:
               
247-616
               

               
Cow position:
               
chr13:8609329-8609694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 79
               

               
Conread position:
               
247-627
               

               
Cow position:
               
chr13:18172558-18172178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 81
               

               
Conread position:
               
247-668
               

               
Cow position:
               
chr13:48165210-48165624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 73
               

               
Conread position:
               
247-693
               

               
Cow position:
               
chr13:37818542-37818971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
247-696
               

               
Cow position:
               
chr13:7059693-7059226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 295
               

               
Conread position:
               
247-697
               

               
Cow position:
               
chr13:18491812-18491377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 34
               

               
Conread position:
               
248-460
               

               
Cow position:
               
chr13:39948202-39948412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
199, 72
               

               
Conread position:
               
248-464
               

               
Cow position:
               
chr13:11147523-11147306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
93, 83
               

               
Conread position:
               
248-489
               

               
Cow position:
               
chr13:562921-563163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 203
               

               
Conread position:
               
248-494
               

               
Cow position:
               
chr13:47313124-47312892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
195, 54
               

               
Conread position:
               
249-597
               

               
Cow position:
               
chr13:8245116-8245459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 122
               

               
Conread position:
               
249-674
               

               
Cow position:
               
chr13:37521516-37521955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 106
               

               
Conread position:
               
249-676
               

               
Cow position:
               
chr13:37804095-37803670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
251-531
               

               
Cow position:
               
chr13:2192922-2192648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
125, 75
               

               
Conread position:
               
251-613
               

               
Cow position:
               
chr13:52227886-52228244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 73
               

               
Conread position:
               
251-677
               

               
Cow position:
               
chr13:53195078-53195485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
118, 66
               

               
Conread position:
               
251-678
               

               
Cow position:
               
chr13:15257164-15257578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 120
               

               
Conread position:
               
251-697
               

               
Cow position:
               
chr13:51014966-51015418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
93, 192
               

               
Conread position:
               
252-591
               

               
Cow position:
               
chr13:15110537-15110192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
252-676
               

               
Cow position:
               
chr13:19022491-19022055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 61
               

               
Conread position:
               
253-550
               

               
Cow position:
               
chr13:60341026-60340725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 206
               

               
Conread position:
               
257-694
               

               
Cow position:
               
chr13:152159-151742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
259-506
               

               
Cow position:
               
chr13:16833872-16834113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
86, 40
               

               
Conread position:
               
259-588
               

               
Cow position:
               
chr13:15528822-15529156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 192
               

               
Conread position:
               
259-626
               

               
Cow position:
               
chr13:13577823-13578191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
259-696
               

               
Cow position:
               
chr13:46112173-46111739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 65
               

               
Conread position:
               
263-446
               

               
Cow position:
               
chr13:2302636-2302821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
81, 23
               

               
Conread position:
               
263-696
               

               
Cow position:
               
chr13:37775025-37775437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 38
               

               
Conread position:
               
265-463
               

               
Cow position:
               
chr13:4423280-4423483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
75, 42
               

               
Conread position:
               
265-620
               

               
Cow position:
               
chr13:15281736-15282085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
265-641
               

               
Cow position:
               
chr13:24230413-24230041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
265-687
               

               
Cow position:
               
chr13:61188735-61188308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
84, 32
               

               
Conread position:
               
265-692
               

               
Cow position:
               
chr13:19223849-19223426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 177
               

               
Conread position:
               
265-693
               

               
Cow position:
               
chr13:37592738-37593171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
265-696
               

               
Cow position:
               
chr13:52749288-52749691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 16
               

               
Conread position:
               
266-610
               

               
Cow position:
               
chr13:26369725-26369383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 56
               

               
Conread position:
               
266-680
               

               
Cow position:
               
chr13:23512558-23512167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
100, 46
               

               
Conread position:
               
267-434
               

               
Cow position:
               
chr13:15947833-15947659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
267-568
               

               
Cow position:
               
chr13:34761869-34761582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
267-608
               

               
Cow position:
               
chr13:547686-547356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 40
               

               
Conread position:
               
267-695
               

               
Cow position:
               
chr13:57475218-57475644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
268-588
               

               
Cow position:
               
chr13:8652240-8652561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
273-441
               

               
Cow position:
               
chr13:5079033-5079198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
274-615
               

               
Cow position:
               
chr13:21283515-21283850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 120
               

               
Conread position:
               
274-655
               

               
Cow position:
               
chr13:15991031-15991413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 187
               

               
Conread position:
               
275-687
               

               
Cow position:
               
chr13:15195019-15195421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
276-651
               

               
Cow position:
               
chr13:14771650-14771269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 262
               

               
Conread position:
               
276-697
               

               
Cow position:
               
chr13:13339053-13338626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
68, 180
               

               
Conread position:
               
278-618
               

               
Cow position:
               
chr13:2404930-2404613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
63, 150
               

               
Conread position:
               
278-695
               

               
Cow position:
               
chr13:55583386-55582967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 180
               

               
Conread position:
               
280-448
               

               
Cow position:
               
chr13:24767574-24767402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
280-542
               

               
Cow position:
               
chr13:12618924-12619188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
280-674
               

               
Cow position:
               
chr13:47186409-47186023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 49
               

               
Conread position:
               
281-603
               

               
Cow position:
               
chr13:6540129-6540449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
282-483
               

               
Cow position:
               
chr13:21189464-21189260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
62, 171
               

               
Conread position:
               
282-617
               

               
Cow position:
               
chr13:5082837-5082503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 96
               

               
Conread position:
               
282-618
               

               
Cow position:
               
chr13:11644116-11643790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
112, 18
               

               
Conread position:
               
282-685
               

               
Cow position:
               
chr13:49503345-49503759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 69
               

               
Conread position:
               
283-684
               

               
Cow position:
               
chr13:52055414-52055810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
283-696
               

               
Cow position:
               
chr13:19188486-19188085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 44
               

               
Conread position:
               
284-697
               

               
Cow position:
               
chr13:5758164-5758562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 40
               

               
Conread position:
               
285-641
               

               
Cow position:
               
chr13:39232659-39232995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
287-607
               

               
Cow position:
               
chr13:20231022-20231328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
57, 104
               

               
Conread position:
               
287-680
               

               
Cow position:
               
chr13:49824205-49823810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
58, 119
               

               
Conread position:
               
287-695
               

               
Cow position:
               
chr13:49022692-49023093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 107
               

               
Conread position:
               
289-680
               

               
Cow position:
               
chr13:607085-607476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
55, 156
               

               
Conread position:
               
289-694
               

               
Cow position:
               
chr13:20088523-20088946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
56, 161
               

               
Conread position:
               
289-694
               

               
Cow position:
               
chr13:53574145-53573752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 43
               

               
Conread position:
               
293-686
               

               
Cow position:
               
chr13:20473515-20473894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 83
               

               
Conread position:
               
295-487
               

               
Cow position:
               
chr13:7790184-7789989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
295-622
               

               
Cow position:
               
chr13:4420517-4420176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
296-680
               

               
Cow position:
               
chr13:29831265-29831640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
68, 17
               

               
Conread position:
               
297-440
               

               
Cow position:
               
chr13:22030256-22030115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
299-625
               

               
Cow position:
               
chr13:28689636-28689312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 55
               

               
Conread position:
               
299-684
               

               
Cow position:
               
chr13:20580075-20579699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 57
               

               
Conread position:
               
299-697
               

               
Cow position:
               
chr13:13954222-13954627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
300-589
               

               
Cow position:
               
chr13:15903182-15902904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
303-463
               

               
Cow position:
               
chr13:39699970-39699811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
304-695
               

               
Cow position:
               
chr13:54583042-54582646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 125
               

               
Conread position:
               
305-510
               

               
Cow position:
               
chr13:36346135-36345930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 146
               

               
Conread position:
               
306-684
               

               
Cow position:
               
chr13:25496169-25495792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 145
               

               
Conread position:
               
312-684
               

               
Cow position:
               
chr13:6849087-6848705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
32, 118
               

               
Conread position:
               
313-684
               

               
Cow position:
               
chr13:9900305-9899927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
313-695
               

               
Cow position:
               
chr13:21135748-21136140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
314-696
               

               
Cow position:
               
chr13:29907842-29908209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
315-597
               

               
Cow position:
               
chr13:50739320-50739041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 114
               

               
Conread position:
               
317-618
               

               
Cow position:
               
chr13:37640738-37640441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
318-504
               

               
Cow position:
               
chr13:16711781-16711591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 136
               

               
Conread position:
               
318-692
               

               
Cow position:
               
chr13:9800654-9800295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
49, 74
               

               
Conread position:
               
318-696
               

               
Cow position:
               
chr13:54388870-54389247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 130
               

               
Conread position:
               
320-680
               

               
Cow position:
               
chr13:18696991-18696610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 50
               

               
Conread position:
               
320-683
               

               
Cow position:
               
chr13:17568950-17569313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 139
               

               
Conread position:
               
320-697
               

               
Cow position:
               
chr13:26698348-26698725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 129
               

               
Conread position:
               
322-445
               

               
Cow position:
               
chr13:53070023-53070150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
322-530
               

               
Cow position:
               
chr13:20128812-20128604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
16, 129
               

               
Conread position:
               
322-602
               

               
Cow position:
               
chr13:43829399-43829110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 136
               

               
Conread position:
               
322-664
               

               
Cow position:
               
chr13:39368102-39367764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
322-671
               

               
Cow position:
               
chr13:6441953-6442311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
18, 141
               

               
Conread position:
               
322-695
               

               
Cow position:
               
chr13:18999689-18999301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
322-696
               

               
Cow position:
               
chr13:2823006-2822636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
322-697
               

               
Cow position:
               
chr13:1363841-1363453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
22, 123
               

               
Conread position:
               
322-697
               

               
Cow position:
               
chr13:5671445-5671817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
323-684
               

               
Cow position:
               
chr13:8374626-8374978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 127
               

               
Conread position:
               
324-522
               

               
Cow position:
               
chr13:14870674-14870478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 101
               

               
Conread position:
               
324-595
               

               
Cow position:
               
chr13:17966064-17966335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 127
               

               
Conread position:
               
324-596
               

               
Cow position:
               
chr13:37946808-37947078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
324-617
               

               
Cow position:
               
chr13:49520677-49520971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
16, 98
               

               
Conread position:
               
324-681
               

               
Cow position:
               
chr13:44003864-44003485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
324-694
               

               
Cow position:
               
chr13:3160536-3160174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 65
               

               
Conread position:
               
324-697
               

               
Cow position:
               
chr13:18058104-18058477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 210
               

               
Conread position:
               
326-561
               

               
Cow position:
               
chr13:52929852-52929619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
326-596
               

               
Cow position:
               
chr13:8555606-8555338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 120
               

               
Conread position:
               
326-626
               

               
Cow position:
               
chr13:11381579-11381879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
326-693
               

               
Cow position:
               
chr13:20360413-20360048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
328-571
               

               
Cow position:
               
chr13:48375504-48375735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
16, 102
               

               
Conread position:
               
329-530
               

               
Cow position:
               
chr13:6455508-6455313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
329-694
               

               
Cow position:
               
chr13:21269440-21269811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 128
               

               
Conread position:
               
330-615
               

               
Cow position:
               
chr13:51115889-51116171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
330-668
               

               
Cow position:
               
chr13:18929667-18929324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
40, 102
               

               
Conread position:
               
330-696
               

               
Cow position:
               
chr13:21280350-21280730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 176
               

               
Conread position:
               
330-697
               

               
Cow position:
               
chr13:5910760-5911122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
40, 113
               

               
Conread position:
               
330-697
               

               
Cow position:
               
chr13:11321477-11321830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
14, 98
               

               
Conread position:
               
331-537
               

               
Cow position:
               
chr13:10098853-10099057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
11, 103
               

               
Conread position:
               
332-677
               

               
Cow position:
               
chr13:20288466-20288128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 118
               

               
Conread position:
               
332-694
               

               
Cow position:
               
chr13:60375355-60375715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 11
               

               
Conread position:
               
337-670
               

               
Cow position:
               
chr13:20217258-20217601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 206
               

               
Conread position:
               
339-685
               

               
Cow position:
               
chr13:17437741-17438080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
340-696
               

               
Cow position:
               
chr13:49796144-49795807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
341-604
               

               
Cow position:
               
chr13:15144247-15144499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
341-610
               

               
Cow position:
               
chr13:11591871-11591609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
341-618
               

               
Cow position:
               
chr13:6389505-6389247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
88, 102
               

               
Conread position:
               
341-626
               

               
Cow position:
               
chr13:626685-626416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
51, 101
               

               
Conread position:
               
341-691
               

               
Cow position:
               
chr13:58763507-58763833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
157, 57
               

               
Conread position:
               
341-692
               

               
Cow position:
               
chr13:6663626-6663981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
341-695
               

               
Cow position:
               
chr13:25381087-25380718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
23, 100
               

               
Conread position:
               
341-697
               

               
Cow position:
               
chr13:25579062-25579422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
342-596
               

               
Cow position:
               
chr13:12745795-12745546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
119, 45
               

               
Conread position:
               
343-676
               

               
Cow position:
               
chr13:1569046-1568725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 143
               

               
Conread position:
               
343-681
               

               
Cow position:
               
chr13:49205099-49204798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
343-695
               

               
Cow position:
               
chr13:14878829-14879188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
345-581
               

               
Cow position:
               
chr13:34555711-34555940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 65
               

               
Conread position:
               
347-684
               

               
Cow position:
               
chr13:14576325-14575996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 65
               

               
Conread position:
               
347-696
               

               
Cow position:
               
chr13:19279209-19278867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 7
               

               
Conread position:
               
347-697
               

               
Cow position:
               
chr13:15194613-15194949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 107
               

               
Conread position:
               
347-697
               

               
Cow position:
               
chr13:18995247-18994898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
348-680
               

               
Cow position:
               
chr13:27550857-27550522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
348-685
               

               
Cow position:
               
chr13:5060863-5060520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
349-680
               

               
Cow position:
               
chr13:19240553-19240226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 94
               

               
Conread position:
               
351-620
               

               
Cow position:
               
chr13:51901703-51901433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
352-591
               

               
Cow position:
               
chr13:56678129-56677893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
352-603
               

               
Cow position:
               
chr13:8402169-8401921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
353-626
               

               
Cow position:
               
chr13:47322291-47322567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
21, 181
               

               
Conread position:
               
355-627
               

               
Cow position:
               
chr13:19320646-19320374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 95
               

               
Conread position:
               
355-668
               

               
Cow position:
               
chr13:49476199-49475870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
15, 67
               

               
Conread position:
               
356-680
               

               
Cow position:
               
chr13:14967105-14967428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 100
               

               
Conread position:
               
357-617
               

               
Cow position:
               
chr13:32826347-32826623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
74, 69
               

               
Conread position:
               
358-618
               

               
Cow position:
               
chr13:13297782-13297530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
137, 34
               

               
Conread position:
               
358-668
               

               
Cow position:
               
chr13:8667721-8667414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
129, 69
               

               
Conread position:
               
358-695
               

               
Cow position:
               
chr13:20534990-20534673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 58
               

               
Conread position:
               
359-617
               

               
Cow position:
               
chr13:55728006-55727754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
132, 14
               

               
Conread position:
               
359-694
               

               
Cow position:
               
chr13:20155107-20154767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
360-631
               

               
Cow position:
               
chr13:3989308-3989039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 8
               

               
Conread position:
               
361-594
               

               
Cow position:
               
chr13:7265020-7265244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
361-620
               

               
Cow position:
               
chr13:8355302-8355055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
135, 30
               

               
Conread position:
               
361-681
               

               
Cow position:
               
chr13:12974907-12974601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
130, 18
               

               
Conread position:
               
362-613
               

               
Cow position:
               
chr13:37527864-37528097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
136, 22
               

               
Conread position:
               
363-613
               

               
Cow position:
               
chr13:47022462-47022221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
131, 50
               

               
Conread position:
               
363-626
               

               
Cow position:
               
chr13:49457774-49457528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
363-676
               

               
Cow position:
               
chr13:46329501-46329812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 90
               

               
Conread position:
               
363-678
               

               
Cow position:
               
chr13:24693054-24692747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 62
               

               
Conread position:
               
363-687
               

               
Cow position:
               
chr13:13533567-13533882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
280, 84
               

               
Conread position:
               
363-687
               

               
Cow position:
               
chr13:16038191-16038505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
132, 6
               

               
Conread position:
               
363-694
               

               
Cow position:
               
chr13:4158766-4158430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
132, 170
               

               
Conread position:
               
363-695
               

               
Cow position:
               
chr13:20331323-20330983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 61
               

               
Conread position:
               
363-696
               

               
Cow position:
               
chr13:620158-620475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
96, 47
               

               
Conread position:
               
363-696
               

               
Cow position:
               
chr13:10221048-10220725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
278, 28
               

               
Conread position:
               
363-696
               

               
Cow position:
               
chr13:54128491-54128824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 6
               

               
Conread position:
               
365-610
               

               
Cow position:
               
chr13:17110320-17110086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 27
               

               
Conread position:
               
365-684
               

               
Cow position:
               
chr13:52880784-52881101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
132, 27
               

               
Conread position:
               
365-685
               

               
Cow position:
               
chr13:16714161-16714484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
366-611
               

               
Cow position:
               
chr13:50568317-50568548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
128, 73
               

               
Conread position:
               
367-697
               

               
Cow position:
               
chr13:17822855-17823182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
368-680
               

               
Cow position:
               
chr13:21127246-21127554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
226, 23
               

               
Conread position:
               
373-618
               

               
Cow position:
               
chr13:20871482-20871242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
93, 74
               

               
Conread position:
               
373-666
               

               
Cow position:
               
chr13:19778756-19779054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
68, 163
               

               
Conread position:
               
374-636
               

               
Cow position:
               
chr13:3211643-3211381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
123, 74
               

               
Conread position:
               
375-674
               

               
Cow position:
               
chr13:50750963-50751260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
65, 79
               

               
Conread position:
               
375-681
               

               
Cow position:
               
chr13:20137915-20137604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
120, 81
               

               
Conread position:
               
375-694
               

               
Cow position:
               
chr13:52477555-52477872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 126
               

               
Conread position:
               
375-696
               

               
Cow position:
               
chr13:56034768-56035085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
120, 74
               

               
Conread position:
               
375-697
               

               
Cow position:
               
chr13:15239430-15239742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
122, 27
               

               
Conread position:
               
375-697
               

               
Cow position:
               
chr13:17498308-17497989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
376-697
               

               
Cow position:
               
chr13:45073167-45073474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
377-695
               

               
Cow position:
               
chr13:28291414-28291091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 79
               

               
Conread position:
               
378-582
               

               
Cow position:
               
chr13:48862008-48862208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
116, 72
               

               
Conread position:
               
378-687
               

               
Cow position:
               
chr13:10040447-10040775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
64, 320
               

               
Conread position:
               
384-697
               

               
Cow position:
               
chr13:13196323-13196010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 57
               

               
Conread position:
               
389-615
               

               
Cow position:
               
chr13:9981764-9981985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
389-683
               

               
Cow position:
               
chr13:21170607-21170312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
389-690
               

               
Cow position:
               
chr13:39939490-39939789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
48, 38
               

               
Conread position:
               
392-610
               

               
Cow position:
               
chr13:827316-827105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
103, 55
               

               
Conread position:
               
392-648
               

               
Cow position:
               
chr13:7191050-7190791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
392-683
               

               
Cow position:
               
chr13:7149440-7149715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
251, 5
               

               
Conread position:
               
392-685
               

               
Cow position:
               
chr13:11231231-11231515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
392-685
               

               
Cow position:
               
chr13:20868682-20868964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
102, 31
               

               
Conread position:
               
392-694
               

               
Cow position:
               
chr13:7149302-7149010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
396-676
               

               
Cow position:
               
chr13:15757190-15756907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
101, 44
               

               
Conread position:
               
396-687
               

               
Cow position:
               
chr13:42672352-42672652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
397-627
               

               
Cow position:
               
chr13:1931819-1931582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
100, 53
               

               
Conread position:
               
397-696
               

               
Cow position:
               
chr13:55162280-55161976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
98, 59
               

               
Conread position:
               
397-697
               

               
Cow position:
               
chr13:6861251-6860946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
98, 58
               

               
Conread position:
               
398-584
               

               
Cow position:
               
chr13:29123373-29123189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
97, 50
               

               
Conread position:
               
401-611
               

               
Cow position:
               
chr13:13211951-13211742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
402-680
               

               
Cow position:
               
chr13:20314555-20314838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
402-683
               

               
Cow position:
               
chr13:62008176-62007891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
29, 23
               

               
Conread position:
               
404-616
               

               
Cow position:
               
chr13:24110548-24110333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
57, 134
               

               
Conread position:
               
404-618
               

               
Cow position:
               
chr13:17838011-17837802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
91, 43
               

               
Conread position:
               
405-597
               

               
Cow position:
               
chr13:25428167-25428351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
405-681
               

               
Cow position:
               
chr13:18197546-18197821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
406-694
               

               
Cow position:
               
chr13:11103131-11103436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 44
               

               
Conread position:
               
407-591
               

               
Cow position:
               
chr13:18181714-18181897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
90, 40
               

               
Conread position:
               
407-671
               

               
Cow position:
               
chr13:35557046-35557315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
410-681
               

               
Cow position:
               
chr13:45108356-45108615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
87, 43
               

               
Conread position:
               
411-631
               

               
Cow position:
               
chr13:17350408-17350196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 65
               

               
Conread position:
               
411-680
               

               
Cow position:
               
chr13:19007987-19007730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
87, 42
               

               
Conread position:
               
412-607
               

               
Cow position:
               
chr13:8478457-8478265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 38
               

               
Conread position:
               
413-668
               

               
Cow position:
               
chr13:56959024-56958776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
414-597
               

               
Cow position:
               
chr13:31529926-31529750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
414-694
               

               
Cow position:
               
chr13:17089471-17089739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
416-679
               

               
Cow position:
               
chr13:21171522-21171784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
416-693
               

               
Cow position:
               
chr13:17611500-17611777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
81, 37
               

               
Conread position:
               
416-695
               

               
Cow position:
               
chr13:25504583-25504307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
78, 42
               

               
Conread position:
               
416-697
               

               
Cow position:
               
chr13:52640900-52641181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
417-632
               

               
Cow position:
               
chr13:37503532-37503745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
40, 95
               

               
Conread position:
               
418-674
               

               
Cow position:
               
chr13:12673247-12673495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
423-608
               

               
Cow position:
               
chr13:29663073-29662891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
423-612
               

               
Cow position:
               
chr13:15460731-15460919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
423-666
               

               
Cow position:
               
chr13:16160465-16160230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 101
               

               
Conread position:
               
423-696
               

               
Cow position:
               
chr13:28440492-28440763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
423-697
               

               
Cow position:
               
chr13:55494477-55494751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
425-613
               

               
Cow position:
               
chr13:9117529-9117709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
425-684
               

               
Cow position:
               
chr13:584830-585093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
70, 85
               

               
Conread position:
               
425-697
               

               
Cow position:
               
chr13:34873632-34873357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
428-696
               

               
Cow position:
               
chr13:8350369-8350072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
19, 112
               

               
Conread position:
               
429-696
               

               
Cow position:
               
chr13:41157441-41157167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
430-585
               

               
Cow position:
               
chr13:60393819-60393668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
430-683
               

               
Cow position:
               
chr13:38035872-38035623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
67, 17
               

               
Conread position:
               
431-695
               

               
Cow position:
               
chr13:33601195-33601458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
432-683
               

               
Cow position:
               
chr13:1147117-1147367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
433-684
               

               
Cow position:
               
chr13:7046905-7046663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
438-692
               

               
Cow position:
               
chr13:15069988-15069738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
438-697
               

               
Cow position:
               
chr13:18340564-18340300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
442-684
               

               
Cow position:
               
chr13:54145449-54145699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
53, 68
               

               
Conread position:
               
449-687
               

               
Cow position:
               
chr13:47243536-47243771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
450-684
               

               
Cow position:
               
chr13:48222527-48222768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 88
               

               
Conread position:
               
450-695
               

               
Cow position:
               
chr13:40541086-40541340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 85
               

               
Conread position:
               
450-697
               

               
Cow position:
               
chr13:84598-84357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
11, 83
               

               
Conread position:
               
452-606
               

               
Cow position:
               
chr13:20520077-20519924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
43, 8
               

               
Conread position:
               
453-696
               

               
Cow position:
               
chr13:15083675-15083431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
44, 62
               

               
Conread position:
               
454-668
               

               
Cow position:
               
chr13:6926531-6926311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
41, 6
               

               
Conread position:
               
455-684
               

               
Cow position:
               
chr13:6183406-6183648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
456-680
               

               
Cow position:
               
chr13:14645064-14644840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
63, 79
               

               
Conread position:
               
456-684
               

               
Cow position:
               
chr13:37621347-37621592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
456-684
               

               
Cow position:
               
chr13:57985925-57986151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
456-691
               

               
Cow position:
               
chr13:43525222-43525472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
456-694
               

               
Cow position:
               
chr13:3209308-3209549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
456-694
               

               
Cow position:
               
chr13:27181054-27180808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
456-694
               

               
Cow position:
               
chr13:42640395-42640154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
161, 35
               

               
Conread position:
               
456-695
               

               
Cow position:
               
chr13:1462284-1462516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 56
               

               
Conread position:
               
456-695
               

               
Cow position:
               
chr13:25941251-25941490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
456-695
               

               
Cow position:
               
chr13:50457871-50457623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
456-697
               

               
Cow position:
               
chr13:15997047-15996804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
457-678
               

               
Cow position:
               
chr13:2776300-2776073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
457-687
               

               
Cow position:
               
chr13:56535467-56535247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
457-697
               

               
Cow position:
               
chr13:49255223-49255491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 84
               

               
Conread position:
               
458-585
               

               
Cow position:
               
chr13:47634518-47634391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
458-628
               

               
Cow position:
               
chr13:51813925-51814087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
458-684
               

               
Cow position:
               
chr13:13775233-13775470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
458-687
               

               
Cow position:
               
chr13:37614180-37614418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
458-696
               

               
Cow position:
               
chr13:21980965-21981197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
39, 58
               

               
Conread position:
               
459-618
               

               
Cow position:
               
chr13:19750725-19750566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
460-680
               

               
Cow position:
               
chr13:10522943-10522726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
460-694
               

               
Cow position:
               
chr13:8699728-8699967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
35, 76
               

               
Conread position:
               
465-687
               

               
Cow position:
               
chr13:15061477-15061709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
466-695
               

               
Cow position:
               
chr13:12923877-12923643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
29, 51
               

               
Conread position:
               
467-674
               

               
Cow position:
               
chr13:52536567-52536364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 72
               

               
Conread position:
               
467-680
               

               
Cow position:
               
chr13:7104656-7104445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
28, 64
               

               
Conread position:
               
467-681
               

               
Cow position:
               
chr13:49356047-49356263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
28, 68
               

               
Conread position:
               
467-686
               

               
Cow position:
               
chr13:16908219-16907994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
28, 68
               

               
Conread position:
               
467-696
               

               
Cow position:
               
chr13:15143841-15144061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
468-697
               

               
Cow position:
               
chr13:50768597-50768360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
470-676
               

               
Cow position:
               
chr13:18092876-18093078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
473-610
               

               
Cow position:
               
chr13:21295071-21294934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
473-651
               

               
Cow position:
               
chr13:38702880-38703058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
473-683
               

               
Cow position:
               
chr13:8450326-8450117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
473-684
               

               
Cow position:
               
chr13:10210663-10210871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
168, 25
               

               
Conread position:
               
473-692
               

               
Cow position:
               
chr13:42849137-42849354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
24, 62
               

               
Conread position:
               
473-693
               

               
Cow position:
               
chr13:6486255-6486477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
474-684
               

               
Cow position:
               
chr13:17813466-17813254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
474-693
               

               
Cow position:
               
chr13:55081137-55080916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
476-613
               

               
Cow position:
               
chr13:21188360-21188224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
476-692
               

               
Cow position:
               
chr13:28439403-28439191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
478-617
               

               
Cow position:
               
chr13:40634857-40634716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
478-684
               

               
Cow position:
               
chr13:53850815-53850603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
478-689
               

               
Cow position:
               
chr13:43839685-43839910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 58
               

               
Conread position:
               
479-684
               

               
Cow position:
               
chr13:13265547-13265347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
164, 16
               

               
Conread position:
               
479-697
               

               
Cow position:
               
chr13:33854694-33854911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
481-613
               

               
Cow position:
               
chr13:6962440-6962307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
481-684
               

               
Cow position:
               
chr13:50622824-50623028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
481-694
               

               
Cow position:
               
chr13:49283792-49284008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
481-697
               

               
Cow position:
               
chr13:3594309-3594103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
6, 54
               

               
Conread position:
               
482-697
               

               
Cow position:
               
chr13:13283334-13283103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
483-617
               

               
Cow position:
               
chr13:1075053-1075187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
12, 53
               

               
Conread position:
               
486-680
               

               
Cow position:
               
chr13:11942196-11942388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 50
               

               
Conread position:
               
487-681
               

               
Cow position:
               
chr13:21277485-21277671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
488-617
               

               
Cow position:
               
chr13:32363200-32363328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
488-620
               

               
Cow position:
               
chr13:12237426-12237294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
488-684
               

               
Cow position:
               
chr13:5930329-5930528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
105, 16
               

               
Conread position:
               
488-696
               

               
Cow position:
               
chr13:10711434-10711628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
489-680
               

               
Cow position:
               
chr13:54682081-54681880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
119, 17
               

               
Conread position:
               
491-697
               

               
Cow position:
               
chr13:21246732-21246944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
152, 44
               

               
Conread position:
               
492-693
               

               
Cow position:
               
chr13:26423028-26422812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
5, 43
               

               
Conread position:
               
492-694
               

               
Cow position:
               
chr13:22345301-22345500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
124, 30
               

               
Conread position:
               
493-692
               

               
Cow position:
               
chr13:51249405-51249602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
493-695
               

               
Cow position:
               
chr13:2233329-2233526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
493-695
               

               
Cow position:
               
chr13:16790184-16789993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
163, 42
               

               
Conread position:
               
493-695
               

               
Cow position:
               
chr13:37554899-37555099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
150, 26
               

               
Conread position:
               
494-684
               

               
Cow position:
               
chr13:48370326-48370517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
496-615
               

               
Cow position:
               
chr13:6975873-6975991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
496-642
               

               
Cow position:
               
chr13:37980786-37980928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
496-656
               

               
Cow position:
               
chr13:17716542-17716702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
147, 38
               

               
Conread position:
               
496-669
               

               
Cow position:
               
chr13:9391532-9391369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
147, 38
               

               
Conread position:
               
496-680
               

               
Cow position:
               
chr13:27027926-27028118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 107
               

               
Conread position:
               
496-680
               

               
Cow position:
               
chr13:52913845-52913663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
131, 38
               

               
Conread position:
               
496-684
               

               
Cow position:
               
chr13:6113554-6113749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
496-684
               

               
Cow position:
               
chr13:16163554-16163370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
147, 38
               

               
Conread position:
               
496-691
               

               
Cow position:
               
chr13:8637670-8637467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
147, 39
               

               
Conread position:
               
496-693
               

               
Cow position:
               
chr13:53865608-53865407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
147, 40
               

               
Conread position:
               
496-694
               

               
Cow position:
               
chr13:24094345-24094544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
146, 29
               

               
Conread position:
               
496-695
               

               
Cow position:
               
chr13:16099149-16099357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
94, 35
               

               
Conread position:
               
496-696
               

               
Cow position:
               
chr13:42302068-42302272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
147, 18
               

               
Conread position:
               
496-697
               

               
Cow position:
               
chr13:3153722-3153520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
147, 38
               

               
Conread position:
               
496-697
               

               
Cow position:
               
chr13:11147029-11146826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
146, 38
               

               
Conread position:
               
496-697
               

               
Cow position:
               
chr13:13796839-13797049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
496-697
               

               
Cow position:
               
chr13:20115220-20115015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
146, 38
               

               
Conread position:
               
496-697
               

               
Cow position:
               
chr13:30148591-30148783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
147, 38
               

               
Conread position:
               
496-697
               

               
Cow position:
               
chr13:31507472-31507670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
147, 36
               

               
Conread position:
               
499-618
               

               
Cow position:
               
chr13:20826754-20826873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
499-620
               

               
Cow position:
               
chr13:11715633-11715514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
119, 5
               

               
Conread position:
               
499-683
               

               
Cow position:
               
chr13:11565806-11565623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
144, 35
               

               
Conread position:
               
499-687
               

               
Cow position:
               
chr13:369154-369345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
143, 35
               

               
Conread position:
               
499-687
               

               
Cow position:
               
chr13:25520946-25521143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
104, 35
               

               
Conread position:
               
499-694
               

               
Cow position:
               
chr13:22046039-22046236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
35, 186
               

               
Conread position:
               
499-695
               

               
Cow position:
               
chr13:47644033-47643821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
499-697
               

               
Cow position:
               
chr13:9124893-9124697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
143, 35
               

               
Conread position:
               
500-615
               

               
Cow position:
               
chr13:15808734-15808622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
500-647
               

               
Cow position:
               
chr13:1037607-1037462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
143, 34
               

               
Conread position:
               
500-685
               

               
Cow position:
               
chr13:5092426-5092613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
143, 34
               

               
Conread position:
               
500-689
               

               
Cow position:
               
chr13:40154762-40154962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
90, 34
               

               
Conread position:
               
500-696
               

               
Cow position:
               
chr13:8537790-8537589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
143, 34
               

               
Conread position:
               
500-697
               

               
Cow position:
               
chr13:28605422-28605626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
500-697
               

               
Cow position:
               
chr13:57323114-57322920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
158, 34
               

               
Conread position:
               
501-684
               

               
Cow position:
               
chr13:22601726-22601903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
157, 33
               

               
Conread position:
               
501-694
               

               
Cow position:
               
chr13:390673-390861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
142, 33
               

               
Conread position:
               
501-697
               

               
Cow position:
               
chr13:21024953-21024753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
102, 18
               

               
Conread position:
               
501-697
               

               
Cow position:
               
chr13:45499196-45499001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
502-669
               

               
Cow position:
               
chr13:52249082-52249246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
143, 32
               

               
Conread position:
               
502-675
               

               
Cow position:
               
chr13:16525257-16525436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
90, 32
               

               
Conread position:
               
502-676
               

               
Cow position:
               
chr13:17135247-17135424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 32
               

               
Conread position:
               
502-685
               

               
Cow position:
               
chr13:18215332-18215140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
91, 32
               

               
Conread position:
               
502-697
               

               
Cow position:
               
chr13:6865699-6865894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
140, 33
               

               
Conread position:
               
502-697
               

               
Cow position:
               
chr13:48127074-48126875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
140, 32
               

               
Conread position:
               
503-694
               

               
Cow position:
               
chr13:23685034-23685231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
137, 31
               

               
Conread position:
               
504-618
               

               
Cow position:
               
chr13:28652705-28652592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
505-684
               

               
Cow position:
               
chr13:55143236-55143057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
122, 29
               

               
Conread position:
               
507-696
               

               
Cow position:
               
chr13:17619853-17619649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
96, 28
               

               
Conread position:
               
508-684
               

               
Cow position:
               
chr13:21425870-21426036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
150, 26
               

               
Conread position:
               
509-684
               

               
Cow position:
               
chr13:20510980-20510801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
509-697
               

               
Cow position:
               
chr13:34141761-34141578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 104
               

               
Conread position:
               
509-697
               

               
Cow position:
               
chr13:38702670-38702866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
95, 25
               

               
Conread position:
               
510-694
               

               
Cow position:
               
chr13:55713478-55713653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
146, 24
               

               
Conread position:
               
510-696
               

               
Cow position:
               
chr13:28081680-28081487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
94, 24
               

               
Conread position:
               
510-697
               

               
Cow position:
               
chr13:19178136-19177939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
512-617
               

               
Cow position:
               
chr13:18701328-18701224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
512-678
               

               
Cow position:
               
chr13:26395417-26395248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
131, 22
               

               
Conread position:
               
512-680
               

               
Cow position:
               
chr13:43576970-43576797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
512-693
               

               
Cow position:
               
chr13:1339185-1339371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
122, 22
               

               
Conread position:
               
512-697
               

               
Cow position:
               
chr13:32186236-32186035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 22
               

               
Conread position:
               
513-684
               

               
Cow position:
               
chr13:20440660-20440830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
513-684
               

               
Cow position:
               
chr13:32914301-32914479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
513-685
               

               
Cow position:
               
chr13:57929615-57929781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
513-692
               

               
Cow position:
               
chr13:14796164-14795983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 18
               

               
Conread position:
               
513-695
               

               
Cow position:
               
chr13:5992810-5992619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
107, 21
               

               
Conread position:
               
513-695
               

               
Cow position:
               
chr13:15162676-15162867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
6, 22
               

               
Conread position:
               
513-695
               

               
Cow position:
               
chr13:28536362-28536550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
128, 21
               

               
Conread position:
               
513-697
               

               
Cow position:
               
chr13:37405666-37405483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
128, 21
               

               
Conread position:
               
514-676
               

               
Cow position:
               
chr13:7097541-7097377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
128, 106
               

               
Conread position:
               
514-681
               

               
Cow position:
               
chr13:23399720-23399552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
129, 21
               

               
Conread position:
               
515-681
               

               
Cow position:
               
chr13:27198861-27198700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
129, 19
               

               
Conread position:
               
515-694
               

               
Cow position:
               
chr13:53619957-53619773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
128, 19
               

               
Conread position:
               
515-695
               

               
Cow position:
               
chr13:16096527-16096344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
156, 19
               

               
Conread position:
               
515-695
               

               
Cow position:
               
chr13:54236760-54236581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
128, 19
               

               
Conread position:
               
516-697
               

               
Cow position:
               
chr13:23823082-23823259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
125, 18
               

               
Conread position:
               
518-682
               

               
Cow position:
               
chr13:6972333-6972165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
132, 16
               

               
Conread position:
               
518-684
               

               
Cow position:
               
chr13:6951529-6951363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
126, 16
               

               
Conread position:
               
519-693
               

               
Cow position:
               
chr13:38683067-38683250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
523-684
               

               
Cow position:
               
chr13:9108730-9108890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
120, 11
               

               
Conread position:
               
526-697
               

               
Cow position:
               
chr13:21886735-21886915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
116, 8
               

               
Conread position:
               
529-696
               

               
Cow position:
               
chr13:3387847-3388024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
529-697
               

               
Cow position:
               
chr13:24004192-24004355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
149, 82
               

               
Conread position:
               
533-671
               

               
Cow position:
               
chr13:9492707-9492572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
110, 24
               

               
Conread position:
               
533-677
               

               
Cow position:
               
chr13:20854520-20854670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 53
               

               
Conread position:
               
533-680
               

               
Cow position:
               
chr13:42203961-42203818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
533-683
               

               
Cow position:
               
chr13:14782278-14782132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
110, 68
               

               
Conread position:
               
533-684
               

               
Cow position:
               
chr13:10986565-10986726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
533-684
               

               
Cow position:
               
chr13:43342504-43342350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
111, 45
               

               
Conread position:
               
533-686
               

               
Cow position:
               
chr13:23795451-23795599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
125, 26
               

               
Conread position:
               
533-689
               

               
Cow position:
               
chr13:38396093-38395932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
106, 66
               

               
Conread position:
               
533-692
               

               
Cow position:
               
chr13:42614020-42613866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
533-693
               

               
Cow position:
               
chr13:23478838-23478674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
110, 83
               

               
Conread position:
               
533-696
               

               
Cow position:
               
chr13:25313213-25313381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
114, 47
               

               
Conread position:
               
535-692
               

               
Cow position:
               
chr13:17815172-17815018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
121, 44
               

               
Conread position:
               
535-694
               

               
Cow position:
               
chr13:47651482-47651643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
108, 56
               

               
Conread position:
               
537-694
               

               
Cow position:
               
chr13:20042328-20042490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
105, 151
               

               
Conread position:
               
537-697
               

               
Cow position:
               
chr13:25924290-25924459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
106, 62
               

               
Conread position:
               
545-686
               

               
Cow position:
               
chr13:62304495-62304350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
98, 54
               

               
Conread position:
               
547-697
               

               
Cow position:
               
chr13:41474794-41474649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
96, 63
               

               
Conread position:
               
561-686
               

               
Cow position:
               
chr13:30809465-30809594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
80, 51
               

               
Conread position:
               
578-697
               

               
Cow position:
               
chr13:24645093-24644976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 8
               
Show alignments to all cow chromosomes.