Non-Coding RNA Search

Cow genome map


           Conread name:
           Pig3-SRG8015N22
        

               Conread position:
               11-680
               

               Cow position:
               chr21:13585422-13584789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               690
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               413, 19
               

               Conread position:
               85-420
               

               Cow position:
               chr21:28907977-28907656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               15, 72
               

               Conread position:
               105-421
               

               Cow position:
               chr21:17697170-17696859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               63, 7
               

               Conread position:
               123-625
               

               Cow position:
               chr21:2927492-2927000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               509
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 48
               

               Conread position:
               129-479
               

               Cow position:
               chr21:21143597-21143960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               175, 35
               

               Conread position:
               135-660
               

               Cow position:
               chr21:22353510-22352998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               539
               

               Alignm identity:
               359
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               88, 20
               

               Conread position:
               145-697
               

               Cow position:
               chr21:27521598-27521061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               566
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 104
               

               Conread position:
               147-553
               

               Cow position:
               chr21:18942100-18941701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 50
               

               Conread position:
               158-684
               

               Cow position:
               chr21:33791629-33791130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               539
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 161
               

               Conread position:
               160-550
               

               Cow position:
               chr21:24094998-24094630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               277
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               184, 54
               

               Conread position:
               163-597
               

               Cow position:
               chr21:46242488-46242064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               286
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               181, 28
               

               Conread position:
               165-694
               

               Cow position:
               chr21:14451978-14452509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               545
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 83
               

               Conread position:
               170-587
               

               Cow position:
               chr21:28955276-28955668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               285
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               295, 136
               

               Conread position:
               172-617
               

               Cow position:
               chr21:10118313-10118761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 37
               

               Conread position:
               174-627
               

               Cow position:
               chr21:12801982-12801540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 35
               

               Conread position:
               174-697
               

               Cow position:
               chr21:14464342-14464866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               540
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 5
               

               Conread position:
               176-606
               

               Cow position:
               chr21:24598418-24598843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 141
               

               Conread position:
               179-626
               

               Cow position:
               chr21:33727701-33727256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 144
               

               Conread position:
               180-418
               

               Cow position:
               chr21:46829502-46829269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               71, 14
               

               Conread position:
               184-681
               

               Cow position:
               chr21:29002392-29001883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               520
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 25
               

               Conread position:
               184-694
               

               Cow position:
               chr21:8618042-8618542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               520
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 146
               

               Conread position:
               185-427
               

               Cow position:
               chr21:34835654-34835424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               185-462
               

               Cow position:
               chr21:28944593-28944321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               154, 39
               

               Conread position:
               185-597
               

               Cow position:
               chr21:45355605-45356010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 150
               

               Conread position:
               195-493
               

               Cow position:
               chr21:23500044-23499753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               10, 61
               

               Conread position:
               197-606
               

               Cow position:
               chr21:1058858-1059262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 54
               

               Conread position:
               197-684
               

               Cow position:
               chr21:6051287-6051772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               298, 228
               

               Conread position:
               197-694
               

               Cow position:
               chr21:37706622-37706138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 29
               

               Conread position:
               200-538
               

               Cow position:
               chr21:12961115-12960780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 54
               

               Conread position:
               201-695
               

               Cow position:
               chr21:8206575-8207036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               336
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               241, 81
               

               Conread position:
               205-614
               

               Cow position:
               chr21:4399588-4399997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 47
               

               Conread position:
               205-670
               

               Cow position:
               chr21:17193969-17193495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 13
               

               Conread position:
               205-684
               

               Cow position:
               chr21:33510-34000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 117
               

               Conread position:
               205-692
               

               Cow position:
               chr21:40133944-40134422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 219
               

               Conread position:
               207-445
               

               Cow position:
               chr21:48484650-48484419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               163, 40
               

               Conread position:
               210-626
               

               Cow position:
               chr21:34565419-34565009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               282
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               134, 176
               

               Conread position:
               210-697
               

               Cow position:
               chr21:32559559-32559090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 13
               

               Conread position:
               211-609
               

               Cow position:
               chr21:41597610-41598000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 238
               

               Conread position:
               211-697
               

               Cow position:
               chr21:22718986-22718503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 199
               

               Conread position:
               212-647
               

               Cow position:
               chr21:17419745-17419323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               267
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               283, 177
               

               Conread position:
               212-691
               

               Cow position:
               chr21:15445283-15444808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 127
               

               Conread position:
               212-695
               

               Cow position:
               chr21:18568855-18568357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 262
               

               Conread position:
               213-600
               

               Cow position:
               chr21:44671550-44671924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 181
               

               Conread position:
               214-404
               

               Cow position:
               chr21:31159053-31159250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               158
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               214-419
               

               Cow position:
               chr21:7716993-7716782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               166
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               214-421
               

               Cow position:
               chr21:363453-363654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               123, 69
               

               Conread position:
               214-425
               

               Cow position:
               chr21:23683348-23683556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               79, 102
               

               Conread position:
               214-428
               

               Cow position:
               chr21:4189632-4189846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               214-428
               

               Cow position:
               chr21:13303617-13303829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               155, 121
               

               Conread position:
               214-432
               

               Cow position:
               chr21:32395884-32395661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               52, 43
               

               Conread position:
               214-437
               

               Cow position:
               chr21:34658832-34659054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               156, 108
               

               Conread position:
               214-442
               

               Cow position:
               chr21:17302578-17302351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               129, 62
               

               Conread position:
               214-442
               

               Cow position:
               chr21:44331487-44331269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               128, 33
               

               Conread position:
               214-443
               

               Cow position:
               chr21:5649704-5649935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               128, 55
               

               Conread position:
               214-445
               

               Cow position:
               chr21:13850274-13850037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               7, 14
               

               Conread position:
               214-445
               

               Cow position:
               chr21:17434523-17434290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               130, 140
               

               Conread position:
               214-445
               

               Cow position:
               chr21:34738396-34738638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               98, 111
               

               Conread position:
               214-445
               

               Cow position:
               chr21:40244232-40244468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               214-446
               

               Cow position:
               chr21:21968112-21968346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               137, 43
               

               Conread position:
               214-459
               

               Cow position:
               chr21:17714111-17714361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               125, 144
               

               Conread position:
               214-460
               

               Cow position:
               chr21:7132664-7132424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 33
               

               Conread position:
               214-469
               

               Cow position:
               chr21:13751184-13751442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               210, 236
               

               Conread position:
               214-472
               

               Cow position:
               chr21:33235596-33235853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               52, 43
               

               Conread position:
               214-472
               

               Cow position:
               chr21:36377135-36377403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               42, 248
               

               Conread position:
               214-474
               

               Cow position:
               chr21:11759666-11759411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               53, 89
               

               Conread position:
               214-483
               

               Cow position:
               chr21:6764904-6764637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               208
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               128, 52
               

               Conread position:
               214-483
               

               Cow position:
               chr21:24796240-24795971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               52, 42
               

               Conread position:
               214-489
               

               Cow position:
               chr21:912170-911897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 109
               

               Conread position:
               214-489
               

               Cow position:
               chr21:21480381-21480115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 33
               

               Conread position:
               214-494
               

               Cow position:
               chr21:36793680-36793969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               33, 118
               

               Conread position:
               214-499
               

               Cow position:
               chr21:42913948-42913663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 108
               

               Conread position:
               214-502
               

               Cow position:
               chr21:47802462-47802176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 201
               

               Conread position:
               214-506
               

               Cow position:
               chr21:16612427-16612712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 98
               

               Conread position:
               214-506
               

               Cow position:
               chr21:20925708-20925418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 27
               

               Conread position:
               214-514
               

               Cow position:
               chr21:34074765-34075066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 43
               

               Conread position:
               214-519
               

               Cow position:
               chr21:47067089-47066798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               57, 33
               

               Conread position:
               214-524
               

               Cow position:
               chr21:32535774-32536082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 98
               

               Conread position:
               214-527
               

               Cow position:
               chr21:2904664-2904370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               236
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               37, 100
               

               Conread position:
               214-528
               

               Cow position:
               chr21:23192720-23192400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 260
               

               Conread position:
               214-540
               

               Cow position:
               chr21:13489441-13489766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               121, 16
               

               Conread position:
               214-542
               

               Cow position:
               chr21:10727079-10727399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 33
               

               Conread position:
               214-547
               

               Cow position:
               chr21:36163165-36162832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               134, 108
               

               Conread position:
               214-549
               

               Cow position:
               chr21:4080152-4080477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               130, 45
               

               Conread position:
               214-555
               

               Cow position:
               chr21:7564524-7564172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 55
               

               Conread position:
               214-561
               

               Cow position:
               chr21:43357461-43357115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 33
               

               Conread position:
               214-562
               

               Cow position:
               chr21:4795020-4795362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 115
               

               Conread position:
               214-569
               

               Cow position:
               chr21:34391172-34390826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 43
               

               Conread position:
               214-582
               

               Cow position:
               chr21:42540422-42540059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 62
               

               Conread position:
               214-588
               

               Cow position:
               chr21:8125998-8125637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               269
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               24, 35
               

               Conread position:
               214-593
               

               Cow position:
               chr21:28512330-28512690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 93
               

               Conread position:
               214-597
               

               Cow position:
               chr21:21223088-21223458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               264
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               130, 33
               

               Conread position:
               214-605
               

               Cow position:
               chr21:42348880-42348511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 226
               

               Conread position:
               214-608
               

               Cow position:
               chr21:10151593-10151993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 33
               

               Conread position:
               214-608
               

               Cow position:
               chr21:24607183-24607564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 205
               

               Conread position:
               214-609
               

               Cow position:
               chr21:27341799-27341406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 100
               

               Conread position:
               214-610
               

               Cow position:
               chr21:45473960-45473567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 109
               

               Conread position:
               214-615
               

               Cow position:
               chr21:36297277-36297689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 33
               

               Conread position:
               214-618
               

               Cow position:
               chr21:16696168-16696571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               283
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               136, 55
               

               Conread position:
               214-618
               

               Cow position:
               chr21:30250410-30250006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 27
               

               Conread position:
               214-618
               

               Cow position:
               chr21:39401398-39401780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 33
               

               Conread position:
               214-618
               

               Cow position:
               chr21:42384303-42384707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 237
               

               Conread position:
               214-620
               

               Cow position:
               chr21:42414304-42413898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 33
               

               Conread position:
               214-627
               

               Cow position:
               chr21:33350540-33350948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 190
               

               Conread position:
               214-629
               

               Cow position:
               chr21:17416964-17416560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               273
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               227, 250
               

               Conread position:
               214-641
               

               Cow position:
               chr21:41579549-41579973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 33
               

               Conread position:
               214-646
               

               Cow position:
               chr21:8549479-8549906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 26
               

               Conread position:
               214-647
               

               Cow position:
               chr21:17475616-17476048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               129, 121
               

               Conread position:
               214-648
               

               Cow position:
               chr21:19196370-19195935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 235
               

               Conread position:
               214-652
               

               Cow position:
               chr21:19258624-19259046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 112
               

               Conread position:
               214-657
               

               Cow position:
               chr21:4905169-4904731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 24
               

               Conread position:
               214-674
               

               Cow position:
               chr21:20160482-20160935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 33
               

               Conread position:
               214-676
               

               Cow position:
               chr21:30231905-30231437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 217
               

               Conread position:
               214-678
               

               Cow position:
               chr21:24858109-24858577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 196
               

               Conread position:
               214-680
               

               Cow position:
               chr21:24296965-24296502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               319
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               135, 12
               

               Conread position:
               214-680
               

               Cow position:
               chr21:38918013-38918465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 33
               

               Conread position:
               214-681
               

               Cow position:
               chr21:20262536-20262083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 102
               

               Conread position:
               214-683
               

               Cow position:
               chr21:37479754-37480230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 199
               

               Conread position:
               214-684
               

               Cow position:
               chr21:33983012-33982547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 157
               

               Conread position:
               214-684
               

               Cow position:
               chr21:39888946-39888459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 95
               

               Conread position:
               214-684
               

               Cow position:
               chr21:40786468-40786949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               321
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               130, 179
               

               Conread position:
               214-686
               

               Cow position:
               chr21:17511574-17512044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 83
               

               Conread position:
               214-686
               

               Cow position:
               chr21:37299263-37299729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 102
               

               Conread position:
               214-686
               

               Cow position:
               chr21:39403740-39403258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               214-688
               

               Cow position:
               chr21:21216343-21215888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 108
               

               Conread position:
               214-693
               

               Cow position:
               chr21:13035251-13034757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 180
               

               Conread position:
               214-694
               

               Cow position:
               chr21:11740334-11739842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 181
               

               Conread position:
               214-694
               

               Cow position:
               chr21:13089684-13089191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               505
               

               Alignm identity:
               338
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               30, 195
               

               Conread position:
               214-695
               

               Cow position:
               chr21:25344676-25345144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 33
               

               Conread position:
               214-696
               

               Cow position:
               chr21:937847-938300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               335
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               375, 33
               

               Conread position:
               214-696
               

               Cow position:
               chr21:9416040-9416520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 237
               

               Conread position:
               214-696
               

               Cow position:
               chr21:23535511-23535992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 82
               

               Conread position:
               214-696
               

               Cow position:
               chr21:41974581-41974084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               505
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 209
               

               Conread position:
               214-696
               

               Cow position:
               chr21:49700238-49699756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 110
               

               Conread position:
               214-697
               

               Cow position:
               chr21:81868-82337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 231
               

               Conread position:
               214-697
               

               Cow position:
               chr21:6833850-6834330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 103
               

               Conread position:
               214-697
               

               Cow position:
               chr21:15584605-15584144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 37
               

               Conread position:
               214-697
               

               Cow position:
               chr21:48108069-48107607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               333
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               27, 102
               

               Conread position:
               215-437
               

               Cow position:
               chr21:23478920-23478697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               92, 50
               

               Conread position:
               215-457
               

               Cow position:
               chr21:9278171-9278422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               25, 33
               

               Conread position:
               215-462
               

               Cow position:
               chr21:40058605-40058849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               129, 43
               

               Conread position:
               215-467
               

               Cow position:
               chr21:37361675-37361426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 111
               

               Conread position:
               215-468
               

               Cow position:
               chr21:42905579-42905327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               174, 88
               

               Conread position:
               215-477
               

               Cow position:
               chr21:17410860-17410600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               123, 47
               

               Conread position:
               215-484
               

               Cow position:
               chr21:34053388-34053129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               215-487
               

               Cow position:
               chr21:27743541-27743816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 68
               

               Conread position:
               215-507
               

               Cow position:
               chr21:5455183-5454903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               92, 32
               

               Conread position:
               215-522
               

               Cow position:
               chr21:3381282-3380975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               224
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               141, 42
               

               Conread position:
               215-543
               

               Cow position:
               chr21:5636922-5636597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 102
               

               Conread position:
               215-581
               

               Cow position:
               chr21:5566788-5567147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 141
               

               Conread position:
               215-588
               

               Cow position:
               chr21:725093-724711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 240
               

               Conread position:
               215-589
               

               Cow position:
               chr21:36642706-36643074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               131, 107
               

               Conread position:
               215-591
               

               Cow position:
               chr21:47215382-47215024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               262
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               125, 84
               

               Conread position:
               215-597
               

               Cow position:
               chr21:33209997-33210365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 227
               

               Conread position:
               215-597
               

               Cow position:
               chr21:35996972-35997348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               267
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               36, 11
               

               Conread position:
               215-600
               

               Cow position:
               chr21:25764434-25764815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 31
               

               Conread position:
               215-610
               

               Cow position:
               chr21:32237096-32237470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 107
               

               Conread position:
               215-615
               

               Cow position:
               chr21:38900572-38900967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 214
               

               Conread position:
               215-616
               

               Cow position:
               chr21:33263646-33264040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 85
               

               Conread position:
               215-617
               

               Cow position:
               chr21:5392743-5392340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 31
               

               Conread position:
               215-617
               

               Cow position:
               chr21:44515073-44515469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 97
               

               Conread position:
               215-626
               

               Cow position:
               chr21:25800213-25800605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               273
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               181, 25
               

               Conread position:
               215-634
               

               Cow position:
               chr21:3818015-3818424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               215-641
               

               Cow position:
               chr21:45151824-45151407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               126, 90
               

               Conread position:
               215-648
               

               Cow position:
               chr21:6623942-6624385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               303
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               80, 32
               

               Conread position:
               215-679
               

               Cow position:
               chr21:28734113-28733650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 113
               

               Conread position:
               215-680
               

               Cow position:
               chr21:24222739-24222254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 68
               

               Conread position:
               215-681
               

               Cow position:
               chr21:27229996-27229539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 107
               

               Conread position:
               215-684
               

               Cow position:
               chr21:5898599-5898142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 11
               

               Conread position:
               215-684
               

               Cow position:
               chr21:44565903-44565462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 86
               

               Conread position:
               215-684
               

               Cow position:
               chr21:46849324-46848865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 109
               

               Conread position:
               215-686
               

               Cow position:
               chr21:41620918-41621397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 245
               

               Conread position:
               215-693
               

               Cow position:
               chr21:9310842-9311331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 130
               

               Conread position:
               215-696
               

               Cow position:
               chr21:19083801-19083305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 32
               

               Conread position:
               215-696
               

               Cow position:
               chr21:34010591-34010118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 32
               

               Conread position:
               215-697
               

               Cow position:
               chr21:27863722-27863238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 34
               

               Conread position:
               216-391
               

               Cow position:
               chr21:20162335-20162512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               125, 65
               

               Conread position:
               216-434
               

               Cow position:
               chr21:42053465-42053249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               173, 106
               

               Conread position:
               216-471
               

               Cow position:
               chr21:12616939-12617190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 119
               

               Conread position:
               216-474
               

               Cow position:
               chr21:393821-394078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 179
               

               Conread position:
               216-483
               

               Cow position:
               chr21:31676298-31676562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               116, 82
               

               Conread position:
               216-516
               

               Cow position:
               chr21:11639820-11640119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               134, 53
               

               Conread position:
               216-521
               

               Cow position:
               chr21:44115-44407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               216-557
               

               Cow position:
               chr21:33729233-33729567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               244
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               35, 130
               

               Conread position:
               216-577
               

               Cow position:
               chr21:4998685-4998338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               258
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               126, 38
               

               Conread position:
               216-578
               

               Cow position:
               chr21:41878276-41878627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 70
               

               Conread position:
               216-588
               

               Cow position:
               chr21:2679352-2679716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 208
               

               Conread position:
               216-608
               

               Cow position:
               chr21:31691277-31691670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 312
               

               Conread position:
               216-614
               

               Cow position:
               chr21:28993826-28993425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               273
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               124, 236
               

               Conread position:
               216-617
               

               Cow position:
               chr21:36795402-36795800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 123
               

               Conread position:
               216-618
               

               Cow position:
               chr21:26244734-26245112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 12
               

               Conread position:
               216-668
               

               Cow position:
               chr21:14760380-14760808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 93
               

               Conread position:
               216-674
               

               Cow position:
               chr21:23821968-23822409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 53
               

               Conread position:
               216-677
               

               Cow position:
               chr21:23672544-23673005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 31
               

               Conread position:
               216-677
               

               Cow position:
               chr21:29015092-29014657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 97
               

               Conread position:
               216-680
               

               Cow position:
               chr21:45971358-45970916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 105
               

               Conread position:
               216-683
               

               Cow position:
               chr21:641384-641850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 77
               

               Conread position:
               216-683
               

               Cow position:
               chr21:643137-643586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 24
               

               Conread position:
               216-683
               

               Cow position:
               chr21:7672933-7673379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 35
               

               Conread position:
               216-684
               

               Cow position:
               chr21:6713738-6713257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 188
               

               Conread position:
               216-684
               

               Cow position:
               chr21:33997422-33996983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 36
               

               Conread position:
               216-684
               

               Cow position:
               chr21:44252026-44251572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 106
               

               Conread position:
               216-685
               

               Cow position:
               chr21:18289461-18289946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 166
               

               Conread position:
               216-693
               

               Cow position:
               chr21:10263843-10264311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 36
               

               Conread position:
               217-434
               

               Cow position:
               chr21:33419914-33419706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               149, 76
               

               Conread position:
               217-526
               

               Cow position:
               chr21:28881943-28882246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 100
               

               Conread position:
               217-571
               

               Cow position:
               chr21:15742290-15741934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               151, 81
               

               Conread position:
               217-580
               

               Cow position:
               chr21:18842437-18842077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 160
               

               Conread position:
               217-598
               

               Cow position:
               chr21:28442545-28442910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 111
               

               Conread position:
               217-618
               

               Cow position:
               chr21:13738372-13738750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               280
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               127, 24
               

               Conread position:
               217-641
               

               Cow position:
               chr21:46912345-46912766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               288
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               152, 40
               

               Conread position:
               217-669
               

               Cow position:
               chr21:22860803-22861244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 30
               

               Conread position:
               217-674
               

               Cow position:
               chr21:47465317-47464862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 9
               

               Conread position:
               217-679
               

               Cow position:
               chr21:29069528-29069061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 105
               

               Conread position:
               217-686
               

               Cow position:
               chr21:23586677-23587141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 230
               

               Conread position:
               218-408
               

               Cow position:
               chr21:18935563-18935752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               125, 36
               

               Conread position:
               218-629
               

               Cow position:
               chr21:23801319-23800920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 32
               

               Conread position:
               218-648
               

               Cow position:
               chr21:3361212-3360790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 32
               

               Conread position:
               218-686
               

               Cow position:
               chr21:19958028-19958487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               323
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               120, 23
               

               Conread position:
               219-684
               

               Cow position:
               chr21:10005083-10004615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 136
               

               Conread position:
               220-616
               

               Cow position:
               chr21:712736-713139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               281
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               15, 102
               

               Conread position:
               220-618
               

               Cow position:
               chr21:13128287-13127903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 27
               

               Conread position:
               222-687
               

               Cow position:
               chr21:38449646-38449181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 229
               

               Conread position:
               225-406
               

               Cow position:
               chr21:24797504-24797676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               225-412
               

               Cow position:
               chr21:13163702-13163886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               139, 29
               

               Conread position:
               225-420
               

               Cow position:
               chr21:40065506-40065311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               20, 70
               

               Conread position:
               225-426
               

               Cow position:
               chr21:48262940-48263131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               178, 111
               

               Conread position:
               225-428
               

               Cow position:
               chr21:11706942-11706735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               165
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               119, 22
               

               Conread position:
               225-442
               

               Cow position:
               chr21:26829432-26829233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               205, 15
               

               Conread position:
               225-445
               

               Cow position:
               chr21:42190356-42190147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               141, 26
               

               Conread position:
               225-459
               

               Cow position:
               chr21:5596955-5597191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               119, 153
               

               Conread position:
               225-469
               

               Cow position:
               chr21:31277630-31277873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               130, 48
               

               Conread position:
               225-479
               

               Cow position:
               chr21:45866745-45866993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               143, 52
               

               Conread position:
               225-506
               

               Cow position:
               chr21:28443570-28443287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 201
               

               Conread position:
               225-516
               

               Cow position:
               chr21:17674427-17674136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               151, 55
               

               Conread position:
               225-525
               

               Cow position:
               chr21:7067853-7068158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               87, 116
               

               Conread position:
               225-530
               

               Cow position:
               chr21:426599-426918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               232
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               119, 22
               

               Conread position:
               225-557
               

               Cow position:
               chr21:10601559-10601238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 22
               

               Conread position:
               225-579
               

               Cow position:
               chr21:28998097-28997743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               115, 246
               

               Conread position:
               225-598
               

               Cow position:
               chr21:21077138-21077487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 60
               

               Conread position:
               225-602
               

               Cow position:
               chr21:45850901-45850525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 22
               

               Conread position:
               225-612
               

               Cow position:
               chr21:35569575-35569172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 22
               

               Conread position:
               225-616
               

               Cow position:
               chr21:10514616-10514995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 49
               

               Conread position:
               225-617
               

               Cow position:
               chr21:23322272-23321881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 22
               

               Conread position:
               225-617
               

               Cow position:
               chr21:29484793-29485175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 22
               

               Conread position:
               225-622
               

               Cow position:
               chr21:25382818-25383231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 60
               

               Conread position:
               225-626
               

               Cow position:
               chr21:4098684-4099075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               119, 95
               

               Conread position:
               225-626
               

               Cow position:
               chr21:34739658-34740050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 22
               

               Conread position:
               225-629
               

               Cow position:
               chr21:21982615-21983014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               110, 216
               

               Conread position:
               225-630
               

               Cow position:
               chr21:31662269-31662677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 198
               

               Conread position:
               225-639
               

               Cow position:
               chr21:38120916-38121320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 103
               

               Conread position:
               225-647
               

               Cow position:
               chr21:18929506-18929920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               265
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               110, 216
               

               Conread position:
               225-649
               

               Cow position:
               chr21:17643161-17642762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 29
               

               Conread position:
               225-668
               

               Cow position:
               chr21:8351495-8351043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 41
               

               Conread position:
               225-676
               

               Cow position:
               chr21:3236341-3236762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 22
               

               Conread position:
               225-676
               

               Cow position:
               chr21:30849130-30848689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 51
               

               Conread position:
               225-679
               

               Cow position:
               chr21:11645160-11644704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 119
               

               Conread position:
               225-680
               

               Cow position:
               chr21:3585547-3585101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 9
               

               Conread position:
               225-681
               

               Cow position:
               chr21:31253344-31253798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 229
               

               Conread position:
               225-684
               

               Cow position:
               chr21:36762862-36763330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 73
               

               Conread position:
               225-684
               

               Cow position:
               chr21:42841782-42841318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 21
               

               Conread position:
               225-693
               

               Cow position:
               chr21:27569349-27568883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 22
               

               Conread position:
               225-693
               

               Cow position:
               chr21:42135815-42135343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 248
               

               Conread position:
               225-694
               

               Cow position:
               chr21:46973318-46972889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               321
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               26, 85
               

               Conread position:
               225-697
               

               Cow position:
               chr21:3763928-3763470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 14
               

               Conread position:
               225-697
               

               Cow position:
               chr21:4282059-4281602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 95
               

               Conread position:
               226-468
               

               Cow position:
               chr21:48251220-48250977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               15, 22
               

               Conread position:
               226-479
               

               Cow position:
               chr21:18494776-18495029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 21
               

               Conread position:
               226-570
               

               Cow position:
               chr21:16187989-16187657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 21
               

               Conread position:
               226-602
               

               Cow position:
               chr21:395686-396049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 21
               

               Conread position:
               226-617
               

               Cow position:
               chr21:13365151-13365541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 99
               

               Conread position:
               226-639
               

               Cow position:
               chr21:45330130-45329738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 21
               

               Conread position:
               226-647
               

               Cow position:
               chr21:28429259-28429670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               278
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               117, 94
               

               Conread position:
               226-697
               

               Cow position:
               chr21:13048387-13047908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 98
               

               Conread position:
               226-697
               

               Cow position:
               chr21:34653894-34654350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               417, 15
               

               Conread position:
               227-445
               

               Cow position:
               chr21:29942817-29943030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               227-459
               

               Cow position:
               chr21:37322479-37322265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               151, 20
               

               Conread position:
               227-487
               

               Cow position:
               chr21:5137680-5137420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               14, 86
               

               Conread position:
               227-493
               

               Cow position:
               chr21:2785966-2785703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               117, 28
               

               Conread position:
               227-506
               

               Cow position:
               chr21:3813672-3813396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 96
               

               Conread position:
               227-553
               

               Cow position:
               chr21:17428314-17428629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               117, 43
               

               Conread position:
               227-581
               

               Cow position:
               chr21:45330797-45330446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 223
               

               Conread position:
               227-584
               

               Cow position:
               chr21:18850408-18850059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 76
               

               Conread position:
               227-617
               

               Cow position:
               chr21:1591362-1591742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 20
               

               Conread position:
               227-618
               

               Cow position:
               chr21:46263987-46264368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               227-672
               

               Cow position:
               chr21:28626052-28626482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 46
               

               Conread position:
               227-676
               

               Cow position:
               chr21:47764301-47763867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 26
               

               Conread position:
               228-479
               

               Cow position:
               chr21:1464040-1464289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               115, 76
               

               Conread position:
               228-596
               

               Cow position:
               chr21:30990456-30990111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 19
               

               Conread position:
               228-648
               

               Cow position:
               chr21:19614985-19615398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               286
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               117, 42
               

               Conread position:
               228-697
               

               Cow position:
               chr21:9710892-9710472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 91
               

               Conread position:
               228-697
               

               Cow position:
               chr21:40589671-40589201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 143
               

               Conread position:
               229-420
               

               Cow position:
               chr21:4268686-4268879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               113, 93
               

               Conread position:
               229-429
               

               Cow position:
               chr21:10493590-10493795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               229-598
               

               Cow position:
               chr21:18845202-18844833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 48
               

               Conread position:
               229-602
               

               Cow position:
               chr21:15610967-15611322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 18
               

               Conread position:
               229-631
               

               Cow position:
               chr21:13727947-13727553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               105, 116
               

               Conread position:
               229-697
               

               Cow position:
               chr21:22856029-22856506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 18
               

               Conread position:
               231-562
               

               Cow position:
               chr21:35897810-35897484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               174, 8
               

               Conread position:
               231-639
               

               Cow position:
               chr21:9990329-9990727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 46
               

               Conread position:
               232-596
               

               Cow position:
               chr21:23785847-23786209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               107, 20
               

               Conread position:
               232-639
               

               Cow position:
               chr21:28190844-28191250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 172
               

               Conread position:
               233-506
               

               Cow position:
               chr21:17174957-17175234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               216
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               20, 85
               

               Conread position:
               233-563
               

               Cow position:
               chr21:46143760-46144102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 228
               

               Conread position:
               233-588
               

               Cow position:
               chr21:30607271-30606917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 87
               

               Conread position:
               233-606
               

               Cow position:
               chr21:37345285-37344915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 99
               

               Conread position:
               233-684
               

               Cow position:
               chr21:17455202-17455651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 24
               

               Conread position:
               234-432
               

               Cow position:
               chr21:40712956-40713159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               234-445
               

               Cow position:
               chr21:13703868-13703657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               110, 74
               

               Conread position:
               234-550
               

               Cow position:
               chr21:13488337-13488657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 207
               

               Conread position:
               234-591
               

               Cow position:
               chr21:15911218-15911571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               234-639
               

               Cow position:
               chr21:17722842-17723232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               271
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               25, 20
               

               Conread position:
               235-506
               

               Cow position:
               chr21:39450349-39450074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               109, 16
               

               Conread position:
               235-526
               

               Cow position:
               chr21:42023943-42024228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 87
               

               Conread position:
               235-684
               

               Cow position:
               chr21:802475-802056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 74
               

               Conread position:
               236-448
               

               Cow position:
               chr21:45375436-45375653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 11
               

               Conread position:
               236-685
               

               Cow position:
               chr21:17183741-17184186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               238-389
               

               Cow position:
               chr21:35897304-35897454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               107, 90
               

               Conread position:
               238-610
               

               Cow position:
               chr21:15976464-15976822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 9
               

               Conread position:
               243-408
               

               Cow position:
               chr21:49353028-49353193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               243-478
               

               Cow position:
               chr21:9872794-9873018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               171, 54
               

               Conread position:
               243-501
               

               Cow position:
               chr21:49662290-49662039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               187, 49
               

               Conread position:
               243-604
               

               Cow position:
               chr21:28810436-28810078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 34
               

               Conread position:
               243-614
               

               Cow position:
               chr21:18790729-18790372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 74
               

               Conread position:
               243-618
               

               Cow position:
               chr21:33562842-33563201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 34
               

               Conread position:
               243-684
               

               Cow position:
               chr21:32339910-32339478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 66
               

               Conread position:
               244-412
               

               Cow position:
               chr21:13763450-13763616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               99, 68
               

               Conread position:
               244-643
               

               Cow position:
               chr21:21169667-21169273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 98
               

               Conread position:
               244-649
               

               Cow position:
               chr21:27146164-27145762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 194
               

               Conread position:
               244-676
               

               Cow position:
               chr21:36756442-36756867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 59
               

               Conread position:
               244-685
               

               Cow position:
               chr21:26648178-26647754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               306
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               100, 34
               

               Conread position:
               245-608
               

               Cow position:
               chr21:28989441-28989804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 15
               

               Conread position:
               247-422
               

               Cow position:
               chr21:13754633-13754797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               97, 36
               

               Conread position:
               247-576
               

               Cow position:
               chr21:19363633-19363304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 287
               

               Conread position:
               247-594
               

               Cow position:
               chr21:8235714-8235388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               251
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               183, 77
               

               Conread position:
               247-673
               

               Cow position:
               chr21:41198581-41198141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 294
               

               Conread position:
               247-684
               

               Cow position:
               chr21:38692020-38692462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 88
               

               Conread position:
               247-687
               

               Cow position:
               chr21:29214318-29213889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               250, 88
               

               Conread position:
               247-694
               

               Cow position:
               chr21:30592473-30592040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 70
               

               Conread position:
               247-695
               

               Cow position:
               chr21:22194280-22193812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 70
               

               Conread position:
               248-554
               

               Cow position:
               chr21:46860270-46859988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               248-594
               

               Cow position:
               chr21:48176658-48176993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               94, 107
               

               Conread position:
               248-604
               

               Cow position:
               chr21:10000912-10001259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 43
               

               Conread position:
               248-626
               

               Cow position:
               chr21:10823387-10823764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               273
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               96, 15
               

               Conread position:
               248-684
               

               Cow position:
               chr21:28211028-28211444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 140
               

               Conread position:
               248-693
               

               Cow position:
               chr21:44826051-44825599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 9
               

               Conread position:
               248-696
               

               Cow position:
               chr21:44114297-44113854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               313
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               84, 9
               

               Conread position:
               250-434
               

               Cow position:
               chr21:6765714-6765897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               114, 88
               

               Conread position:
               250-617
               

               Cow position:
               chr21:7582076-7581708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 205
               

               Conread position:
               250-680
               

               Cow position:
               chr21:28244310-28244730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               392, 9
               

               Conread position:
               251-693
               

               Cow position:
               chr21:18065089-18064650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 85
               

               Conread position:
               257-617
               

               Cow position:
               chr21:27624553-27624896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 20
               

               Conread position:
               257-697
               

               Cow position:
               chr21:41590716-41590287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 85
               

               Conread position:
               258-684
               

               Cow position:
               chr21:13840164-13840597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               298
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               84, 38
               

               Conread position:
               259-428
               

               Cow position:
               chr21:5344498-5344668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               85, 17
               

               Conread position:
               259-446
               

               Cow position:
               chr21:28617433-28617618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               83, 23
               

               Conread position:
               259-683
               

               Cow position:
               chr21:13714001-13713569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               287
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               85, 192
               

               Conread position:
               259-692
               

               Cow position:
               chr21:32297668-32297234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 156
               

               Conread position:
               259-695
               

               Cow position:
               chr21:18800686-18800252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 53
               

               Conread position:
               260-399
               

               Cow position:
               chr21:14125889-14126030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               265-450
               

               Cow position:
               chr21:10608606-10608419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               77, 51
               

               Conread position:
               265-463
               

               Cow position:
               chr21:8187665-8187460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               74, 197
               

               Conread position:
               265-611
               

               Cow position:
               chr21:45921210-45920868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 65
               

               Conread position:
               265-613
               

               Cow position:
               chr21:24642367-24642705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 45
               

               Conread position:
               265-627
               

               Cow position:
               chr21:10633792-10633432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 55
               

               Conread position:
               265-659
               

               Cow position:
               chr21:46607735-46607354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               74, 36
               

               Conread position:
               266-446
               

               Cow position:
               chr21:31511143-31511315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               266-524
               

               Cow position:
               chr21:45439400-45439131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               79, 49
               

               Conread position:
               266-597
               

               Cow position:
               chr21:6316050-6316390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               30, 196
               

               Conread position:
               267-457
               

               Cow position:
               chr21:41455100-41454907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               78, 109
               

               Conread position:
               268-404
               

               Cow position:
               chr21:36765930-36765797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               101, 54
               

               Conread position:
               269-436
               

               Cow position:
               chr21:14515700-14515870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               67, 10
               

               Conread position:
               270-446
               

               Cow position:
               chr21:47009386-47009208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               96, 54
               

               Conread position:
               270-521
               

               Cow position:
               chr21:18041989-18041745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 39
               

               Conread position:
               271-459
               

               Cow position:
               chr21:34141333-34141141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               68, 28
               

               Conread position:
               271-680
               

               Cow position:
               chr21:957521-957932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 124
               

               Conread position:
               271-697
               

               Cow position:
               chr21:8651137-8651570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               284
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               73, 100
               

               Conread position:
               272-666
               

               Cow position:
               chr21:7825320-7824941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 72
               

               Conread position:
               273-669
               

               Cow position:
               chr21:42007603-42007216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 41
               

               Conread position:
               275-697
               

               Cow position:
               chr21:23980328-23979900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 170
               

               Conread position:
               275-697
               

               Cow position:
               chr21:29978903-29978494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 6
               

               Conread position:
               276-562
               

               Cow position:
               chr21:11250725-11251011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               68, 183
               

               Conread position:
               276-684
               

               Cow position:
               chr21:17637758-17638164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               283
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               68, 118
               

               Conread position:
               276-696
               

               Cow position:
               chr21:48234299-48233896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 33
               

               Conread position:
               278-421
               

               Cow position:
               chr21:12640195-12640342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               278-432
               

               Cow position:
               chr21:5384678-5384834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               72, 108
               

               Conread position:
               278-615
               

               Cow position:
               chr21:28923978-28924305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 46
               

               Conread position:
               278-617
               

               Cow position:
               chr21:11359899-11360223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 134
               

               Conread position:
               278-685
               

               Cow position:
               chr21:12462109-12461701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 59
               

               Conread position:
               279-487
               

               Cow position:
               chr21:39809762-39809961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               279-692
               

               Cow position:
               chr21:20152810-20153232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 57
               

               Conread position:
               280-597
               

               Cow position:
               chr21:12723020-12723327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 116
               

               Conread position:
               280-693
               

               Cow position:
               chr21:17875332-17874914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 168
               

               Conread position:
               281-546
               

               Cow position:
               chr21:17856408-17856670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 89
               

               Conread position:
               281-581
               

               Cow position:
               chr21:20418825-20418521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 171
               

               Conread position:
               281-684
               

               Cow position:
               chr21:20260456-20260030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 31
               

               Conread position:
               284-446
               

               Cow position:
               chr21:37886278-37886439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               60, 107
               

               Conread position:
               284-508
               

               Cow position:
               chr21:42131738-42131505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               60, 147
               

               Conread position:
               285-615
               

               Cow position:
               chr21:10538394-10538060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               22, 40
               

               Conread position:
               286-668
               

               Cow position:
               chr21:34151450-34151827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               271
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               58, 35
               

               Conread position:
               286-674
               

               Cow position:
               chr21:30835234-30835623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 49
               

               Conread position:
               287-683
               

               Cow position:
               chr21:2810273-2809904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               266
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               207, 22
               

               Conread position:
               288-563
               

               Cow position:
               chr21:20192774-20193037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 24
               

               Conread position:
               289-680
               

               Cow position:
               chr21:44213996-44214374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 165
               

               Conread position:
               290-696
               

               Cow position:
               chr21:27810278-27810666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 160
               

               Conread position:
               291-433
               

               Cow position:
               chr21:949794-949659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               291-462
               

               Cow position:
               chr21:2412635-2412806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               53, 78
               

               Conread position:
               293-696
               

               Cow position:
               chr21:30222218-30222619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 107
               

               Conread position:
               294-561
               

               Cow position:
               chr21:36789671-36789936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               51, 77
               

               Conread position:
               297-697
               

               Cow position:
               chr21:18155693-18155282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 133
               

               Conread position:
               299-621
               

               Cow position:
               chr21:40168752-40168425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               8, 132
               

               Conread position:
               301-617
               

               Cow position:
               chr21:2657704-2658006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               130, 69
               

               Conread position:
               301-621
               

               Cow position:
               chr21:25629027-25628710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               68, 47
               

               Conread position:
               301-684
               

               Cow position:
               chr21:16152315-16152707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               271
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               21, 45
               

               Conread position:
               305-506
               

               Cow position:
               chr21:34722901-34722701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               39, 137
               

               Conread position:
               305-600
               

               Cow position:
               chr21:21077486-21077780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               38, 159
               

               Conread position:
               307-487
               

               Cow position:
               chr21:9980073-9979903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               307-600
               

               Cow position:
               chr21:45262921-45262630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 19
               

               Conread position:
               309-590
               

               Cow position:
               chr21:35354422-35354703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 133
               

               Conread position:
               309-666
               

               Cow position:
               chr21:10561691-10561336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 21
               

               Conread position:
               310-570
               

               Cow position:
               chr21:32904264-32904005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               36, 7
               

               Conread position:
               313-515
               

               Cow position:
               chr21:5985425-5985222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 116
               

               Conread position:
               313-606
               

               Cow position:
               chr21:10673024-10673307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               31, 50
               

               Conread position:
               314-550
               

               Cow position:
               chr21:9698189-9697950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               314-559
               

               Cow position:
               chr21:37790110-37789860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               314-697
               

               Cow position:
               chr21:16914669-16915061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               281
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               32, 115
               

               Conread position:
               315-678
               

               Cow position:
               chr21:48637866-48637495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               13, 100
               

               Conread position:
               317-582
               

               Cow position:
               chr21:9940298-9940028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               13, 135
               

               Conread position:
               317-665
               

               Cow position:
               chr21:10410117-10410471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 163
               

               Conread position:
               318-508
               

               Cow position:
               chr21:29224964-29224771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               25, 113
               

               Conread position:
               318-606
               

               Cow position:
               chr21:22465095-22465376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 106
               

               Conread position:
               318-680
               

               Cow position:
               chr21:30236919-30236579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               250
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               27, 105
               

               Conread position:
               318-695
               

               Cow position:
               chr21:2260460-2260071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               177, 107
               

               Conread position:
               321-647
               

               Cow position:
               chr21:21633401-21633078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 99
               

               Conread position:
               322-489
               

               Cow position:
               chr21:4568187-4568354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 64
               

               Conread position:
               323-546
               

               Cow position:
               chr21:38664541-38664765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               17, 50
               

               Conread position:
               323-548
               

               Cow position:
               chr21:6017519-6017753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 219
               

               Conread position:
               323-609
               

               Cow position:
               chr21:17008884-17009169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               21, 71
               

               Conread position:
               323-617
               

               Cow position:
               chr21:42022193-42022472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               323-695
               

               Cow position:
               chr21:33580315-33580690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               9, 35
               

               Conread position:
               324-597
               

               Cow position:
               chr21:46552198-46551925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               46, 17
               

               Conread position:
               324-674
               

               Cow position:
               chr21:22121426-22121759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               261
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               20, 66
               

               Conread position:
               325-695
               

               Cow position:
               chr21:44658487-44658838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               263
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               18, 98
               

               Conread position:
               327-696
               

               Cow position:
               chr21:45906714-45906343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 102
               

               Conread position:
               328-676
               

               Cow position:
               chr21:6997846-6998200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               258
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               13, 125
               

               Conread position:
               329-595
               

               Cow position:
               chr21:31090511-31090260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               15, 77
               

               Conread position:
               341-516
               

               Cow position:
               chr21:33360110-33359940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 111
               

               Conread position:
               341-530
               

               Cow position:
               chr21:37014479-37014295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 85
               

               Conread position:
               341-615
               

               Cow position:
               chr21:27429390-27429646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               154, 37
               

               Conread position:
               341-615
               

               Cow position:
               chr21:36909858-36910126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               23, 85
               

               Conread position:
               341-668
               

               Cow position:
               chr21:28237790-28237448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               233
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               24, 54
               

               Conread position:
               341-676
               

               Cow position:
               chr21:22210320-22209984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               153, 103
               

               Conread position:
               341-679
               

               Cow position:
               chr21:16569825-16570151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 110
               

               Conread position:
               341-695
               

               Cow position:
               chr21:9036219-9036581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 87
               

               Conread position:
               341-696
               

               Cow position:
               chr21:10858740-10859092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 86
               

               Conread position:
               342-530
               

               Cow position:
               chr21:13495465-13495654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               34, 98
               

               Conread position:
               342-679
               

               Cow position:
               chr21:4280747-4280425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               238
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               155, 59
               

               Conread position:
               343-697
               

               Cow position:
               chr21:24343339-24342982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               25, 74
               

               Conread position:
               343-697
               

               Cow position:
               chr21:47714081-47713729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               260
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               343-697
               

               Cow position:
               chr21:47719373-47719026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 48
               

               Conread position:
               344-697
               

               Cow position:
               chr21:33414158-33413819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               113, 76
               

               Conread position:
               345-483
               

               Cow position:
               chr21:34727312-34727174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               38, 22
               

               Conread position:
               345-676
               

               Cow position:
               chr21:15544290-15543980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               243
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               85, 75
               

               Conread position:
               345-678
               

               Cow position:
               chr21:8349256-8349583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 173
               

               Conread position:
               345-684
               

               Cow position:
               chr21:40266049-40266393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 101
               

               Conread position:
               345-687
               

               Cow position:
               chr21:1511219-1511556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 103
               

               Conread position:
               347-694
               

               Cow position:
               chr21:30256340-30255981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               17, 47
               

               Conread position:
               347-697
               

               Cow position:
               chr21:40432379-40432743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               260
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               23, 74
               

               Conread position:
               348-639
               

               Cow position:
               chr21:7377998-7377707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               42, 106
               

               Conread position:
               349-494
               

               Cow position:
               chr21:27079907-27079762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               92, 57
               

               Conread position:
               350-684
               

               Cow position:
               chr21:7394314-7394636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               17, 95
               

               Conread position:
               352-694
               

               Cow position:
               chr21:41140783-41140441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               243
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               19, 87
               

               Conread position:
               353-694
               

               Cow position:
               chr21:12339575-12339893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 33
               

               Conread position:
               354-632
               

               Cow position:
               chr21:23397908-23397639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               76, 29
               

               Conread position:
               354-697
               

               Cow position:
               chr21:297689-298008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 45
               

               Conread position:
               355-676
               

               Cow position:
               chr21:11779592-11779279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               15, 71
               

               Conread position:
               355-681
               

               Cow position:
               chr21:8426379-8426707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 99
               

               Conread position:
               358-697
               

               Cow position:
               chr21:28919582-28919249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               249
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               137, 10
               

               Conread position:
               359-580
               

               Cow position:
               chr21:35899786-35900001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               130, 80
               

               Conread position:
               360-618
               

               Cow position:
               chr21:19360234-19359978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 13
               

               Conread position:
               360-684
               

               Cow position:
               chr21:868982-868652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 64
               

               Conread position:
               361-615
               

               Cow position:
               chr21:43259166-43259414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               18, 67
               

               Conread position:
               362-606
               

               Cow position:
               chr21:44861169-44860934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 61
               

               Conread position:
               362-613
               

               Cow position:
               chr21:29014615-29014365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               363-509
               

               Cow position:
               chr21:41598064-41598210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               131, 85
               

               Conread position:
               363-676
               

               Cow position:
               chr21:5464693-5465006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 131
               

               Conread position:
               363-680
               

               Cow position:
               chr21:47363792-47363461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               132, 84
               

               Conread position:
               363-682
               

               Cow position:
               chr21:22014133-22014456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 63
               

               Conread position:
               363-686
               

               Cow position:
               chr21:977198-976879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               65, 16
               

               Conread position:
               363-693
               

               Cow position:
               chr21:17890249-17890579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               131, 81
               

               Conread position:
               365-692
               

               Cow position:
               chr21:36910688-36911011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               130, 74
               

               Conread position:
               367-692
               

               Cow position:
               chr21:41522457-41522137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 77
               

               Conread position:
               368-684
               

               Cow position:
               chr21:19060136-19059822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               217, 71
               

               Conread position:
               370-618
               

               Cow position:
               chr21:19513818-19514052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               115, 85
               

               Conread position:
               370-697
               

               Cow position:
               chr21:21907476-21907158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               288, 72
               

               Conread position:
               375-686
               

               Cow position:
               chr21:742246-742543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 16
               

               Conread position:
               377-620
               

               Cow position:
               chr21:471637-471876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               118, 70
               

               Conread position:
               377-684
               

               Cow position:
               chr21:45835442-45835122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               117, 69
               

               Conread position:
               380-607
               

               Cow position:
               chr21:40192339-40192119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               9, 68
               

               Conread position:
               380-694
               

               Cow position:
               chr21:17982939-17983247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               63, 39
               

               Conread position:
               381-601
               

               Cow position:
               chr21:42209667-42209448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               50, 45
               

               Conread position:
               383-618
               

               Cow position:
               chr21:734562-734787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               48, 41
               

               Conread position:
               387-668
               

               Cow position:
               chr21:6317710-6317434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               44, 37
               

               Conread position:
               388-679
               

               Cow position:
               chr21:14126259-14126534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               225, 18
               
UCSC Genome Browser
               Conread position:
               388-695
               

               Cow position:
               chr21:44829790-44829480 (view  custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               53, 8
               
UCSC Genome Browser
               
               
               
Conread position: 389-679

               
               
               
Cow position: chr21:28030260-28030541 (view  custom track)

               
               
               
Alignm length: 294

               
               
               
Alignm identity: 238

               
               
               
Alignm E-value: 0

               
               
               
Alignm gaps (pig, cow): 108, 60
UCSC Genome Browser
               
               
               
Conread position: 392-697

               
               
               
Cow position: chr21:38720227-38720529 (view  custom track)

               
               
               
Alignm length: 311

               
               
               
Alignm identity: 217

               
               
               
Alignm E-value: 2e-37

               
               
               
Alignm gaps (pig, cow): 103, 52

               
               
               Conread position:394-693
               
               
               Cow position:chr21:71561-71861 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:236
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):23, 54

               
               
               Conread position:398-676
               
               
               Cow position:chr21:31159384-31159645 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:199
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):97, 50

               
               
               Conread position:398-697
               
               
               Cow position:chr21:13656654-13656354 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:200
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):97, 46

               
               
               Conread position:399-614
               
               
               Cow position:chr21:47160199-47160413 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:150
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):98, 28

               
               
               Conread position:400-647
               
               
               Cow position:chr21:829227-828985 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:191
               
               
               Alignm E-value:8e-40
               
               
               Alignm gaps (pig, cow):54, 10

               
               
               Conread position:402-681
               
               
               Cow position:chr21:9256672-9256392 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:210
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):92, 128

               
               
               Conread position:408-611
               
               
               Cow position:chr21:30980587-30980387 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:160
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):58, 32

               
               
               Conread position:408-680
               
               
               Cow position:chr21:674675-674931 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:199
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):89, 42

               
               
               Conread position:408-683
               
               
               Cow position:chr21:21615765-21616042 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:200
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):33, 133

               
               
               Conread position:408-697
               
               
               Cow position:chr21:7768425-7768706 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:207
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):40, 128

               
               
               Conread position:409-605
               
               
               Cow position:chr21:41046796-41046991 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:143
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):88, 105

               
               
               Conread position:410-582
               
               
               Cow position:chr21:20183064-20183233 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:139
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):40, 60

               
               
               Conread position:413-627
               
               
               Cow position:chr21:9027308-9027520 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:154
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):84, 37

               
               
               Conread position:414-672
               
               
               Cow position:chr21:19240880-19240623 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:192
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):48, 34

               
               
               Conread position:414-685
               
               
               Cow position:chr21:7169683-7169956 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:203
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):45, 33

               
               
               Conread position:415-667
               
               
               Cow position:chr21:28599887-28600125 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:177
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):82, 12

               
               
               Conread position:415-684
               
               
               Cow position:chr21:7394287-7394004 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:212
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):81, 32

               
               
               Conread position:415-692
               
               
               Cow position:chr21:46599357-46599633 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:198
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):82, 37

               
               
               Conread position:416-694
               
               
               Cow position:chr21:13588761-13589039 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:194
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):79, 34

               
               
               Conread position:416-697
               
               
               Cow position:chr21:8431103-8430815 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:199
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):31, 43

               
               
               Conread position:417-680
               
               
               Cow position:chr21:8546018-8545756 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:186
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):226, 31

               
               
               Conread position:418-600
               
               
               Cow position:chr21:7268882-7268703 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):83, 30

               
               
               Conread position:420-668
               
               
               Cow position:chr21:41287792-41287545 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:183
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):77, 36

               
               
               Conread position:420-696
               
               
               Cow position:chr21:12104367-12104632 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:205
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):77, 21

               
               
               Conread position:427-697
               
               
               Cow position:chr21:36682331-36682606 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:218
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):19, 109

               
               
               Conread position:428-694
               
               
               Cow position:chr21:19868946-19868687 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:195
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):69, 46

               
               
               Conread position:432-618
               
               
               Cow position:chr21:30157794-30157608 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:135
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):12, 37

               
               
               Conread position:437-618
               
               
               Cow position:chr21:42463669-42463496 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:134
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):58, 17

               
               
               Conread position:438-677
               
               
               Cow position:chr21:24875368-24875612 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:195
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):13, 97

               
               
               Conread position:439-694
               
               
               Cow position:chr21:20213757-20213496 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:180
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):56, 47

               
               
               Conread position:445-618
               
               
               Cow position:chr21:5342068-5341895 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:139
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):52, 7

               
               
               Conread position:448-617
               
               
               Cow position:chr21:11057850-11057684 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:141
               
               
               Alignm E-value:8e-40
               
               
               Alignm gaps (pig, cow):49, 75

               
               
               Conread position:449-604
               
               
               Cow position:chr21:46451923-46451770 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:125
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):48, 37

               
               
               Conread position:450-668
               
               
               Cow position:chr21:24266535-24266310 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:162
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):24, 18

               
               
               Conread position:450-684
               
               
               Cow position:chr21:9278548-9278797 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):13, 92

               
               
               Conread position:453-681
               
               
               Cow position:chr21:20163741-20163972 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:181
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):42, 83

               
               
               Conread position:453-694
               
               
               Cow position:chr21:16498552-16498793 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:190
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):44, 64

               
               
               Conread position:454-606
               
               
               Cow position:chr21:31147900-31147750 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:116
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):43, 28

               
               
               Conread position:454-697
               
               
               Cow position:chr21:39393782-39394030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:190
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):45, 81

               
               
               Conread position:455-611
               
               
               Cow position:chr21:8625213-8625364 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:118
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):42, 80

               
               
               Conread position:455-684
               
               
               Cow position:chr21:31279291-31279521 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:174
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):40, 80

               
               
               Conread position:455-696
               
               
               Cow position:chr21:39319375-39319129 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:165
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):40, 82

               
               
               Conread position:456-620
               
               
               Cow position:chr21:44592173-44592010 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:120
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):39, 79

               
               
               Conread position:456-678
               
               
               Cow position:chr21:17252942-17252716 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:179
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):41, 58

               
               
               Conread position:456-678
               
               
               Cow position:chr21:24797693-24797916 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:169
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):39, 67

               
               
               Conread position:456-692
               
               
               Cow position:chr21:28907508-28907275 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:177
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):42, 67

               
               
               Conread position:456-697
               
               
               Cow position:chr21:9418119-9417864 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:194
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):42, 67

               
               
               Conread position:456-697
               
               
               Cow position:chr21:27677518-27677763 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:172
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):46, 57

               
               
               Conread position:456-697
               
               
               Cow position:chr21:40475536-40475782 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:181
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):187, 11

               
               
               Conread position:457-621
               
               
               Cow position:chr21:22939804-22939971 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:121
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):31, 83

               
               
               Conread position:457-676
               
               
               Cow position:chr21:36508275-36508489 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:161
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):38, 56

               
               
               Conread position:457-683
               
               
               Cow position:chr21:11678266-11678056 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:169
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):17, 10

               
               
               Conread position:457-697
               
               
               Cow position:chr21:5218738-5218988 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:173
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):18, 149

               
               
               Conread position:458-583
               
               
               Cow position:chr21:7088638-7088764 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:128
               
               
               Alignm identity:105
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):39, 75

               
               
               Conread position:458-641
               
               
               Cow position:chr21:40291708-40291531 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):37, 56

               
               
               Conread position:458-679
               
               
               Cow position:chr21:22850960-22851177 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:166
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):39, 24

               
               
               Conread position:463-620
               
               
               Cow position:chr21:42465824-42465987 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:129
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):31, 8

               
               
               Conread position:466-680
               
               
               Cow position:chr21:13225761-13225980 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:151
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):29, 69

               
               
               Conread position:467-687
               
               
               Cow position:chr21:25014979-25014769 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:173
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):29, 43

               
               
               Conread position:467-695
               
               
               Cow position:chr21:43692863-43693094 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:158
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):28, 173

               
               
               Conread position:473-620
               
               
               Cow position:chr21:5149249-5149400 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:118
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):24, 66

               
               
               Conread position:473-649
               
               
               Cow position:chr21:30243628-30243458 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:139
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):24, 62

               
               
               Conread position:473-677
               
               
               Cow position:chr21:2537086-2536876 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:152
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):25, 17

               
               
               Conread position:473-680
               
               
               Cow position:chr21:40820800-40820588 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:170
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):24, 62

               
               
               Conread position:473-684
               
               
               Cow position:chr21:25012135-25012345 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:171
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):24, 62

               
               
               Conread position:473-693
               
               
               Cow position:chr21:37928702-37928928 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:161
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):22, 62

               
               
               Conread position:473-695
               
               
               Cow position:chr21:5486461-5486218 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):26, 238

               
               
               Conread position:474-615
               
               
               Cow position:chr21:14228226-14228085 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:113
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):23, 61

               
               
               Conread position:474-686
               
               
               Cow position:chr21:15012493-15012700 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:175
               
               
               Alignm E-value:4.2039e-45
               
               
               Alignm gaps (pig, cow):23, 61

               
               
               Conread position:475-610
               
               
               Cow position:chr21:42562688-42562816 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:106
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:475-618
               
               
               Cow position:chr21:41450437-41450579 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:109
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):22, 88

               
               
               Conread position:475-684
               
               
               Cow position:chr21:20318568-20318780 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:155
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):23, 51

               
               
               Conread position:476-691
               
               
               Cow position:chr21:38943563-38943334 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:164
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):19, 0

               
               
               Conread position:477-680
               
               
               Cow position:chr21:26735466-26735660 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:146
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):18, 33

               
               
               Conread position:481-695
               
               
               Cow position:chr21:20174379-20174590 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:165
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):13, 54

               
               
               Conread position:481-697
               
               
               Cow position:chr21:40059089-40059297 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:164
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):14, 53

               
               
               Conread position:485-615
               
               
               Cow position:chr21:40305010-40305139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:132
               
               
               Alignm identity:103
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):108, 10

               
               
               Conread position:487-631
               
               
               Cow position:chr21:17790891-17790746 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:114
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):10, 36

               
               
               Conread position:488-686
               
               
               Cow position:chr21:45376021-45376216 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:153
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):154, 13

               
               
               Conread position:489-621
               
               
               Cow position:chr21:30622708-30622839 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:134
               
               
               Alignm identity:113
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):9, 30

               
               
               Conread position:490-684
               
               
               Cow position:chr21:8506475-8506280 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:159
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):153, 44

               
               
               Conread position:490-684
               
               
               Cow position:chr21:8509363-8509168 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:160
               
               
               Alignm E-value:8e-40
               
               
               Alignm gaps (pig, cow):153, 44

               
               
               Conread position:491-685
               
               
               Cow position:chr21:3177919-3178115 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:140
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):159, 43

               
               
               Conread position:493-684
               
               
               Cow position:chr21:6291820-6292016 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:145
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):149, 41

               
               
               Conread position:493-685
               
               
               Cow position:chr21:24350926-24351120 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:144
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):97, 41

               
               
               Conread position:493-686
               
               
               Cow position:chr21:30657944-30658130 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:146
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):165, 41

               
               
               Conread position:495-683
               
               
               Cow position:chr21:30031311-30031128 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:141
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):19, 36

               
               
               Conread position:496-641
               
               
               Cow position:chr21:9346499-9346644 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:112
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):114, 38

               
               
               Conread position:496-641
               
               
               Cow position:chr21:13043943-13043807 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:114
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):17, 0

               
               
               Conread position:496-665
               
               
               Cow position:chr21:5214425-5214600 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:131
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):104, 38

               
               
               Conread position:496-676
               
               
               Cow position:chr21:11353137-11353323 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:138
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):146, 39

               
               
               Conread position:496-678
               
               
               Cow position:chr21:46809689-46809503 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:135
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):147, 39

               
               
               Conread position:496-684
               
               
               Cow position:chr21:8986099-8986293 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:146
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):107, 18

               
               
               Conread position:496-684
               
               
               Cow position:chr21:37361165-37360972 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:147
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):105, 38

               
               
               Conread position:496-697
               
               
               Cow position:chr21:12348842-12349048 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:145
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):146, 39

               
               
               Conread position:497-677
               
               
               Cow position:chr21:14516027-14516200 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:131
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):159, 25

               
               
               Conread position:497-697
               
               
               Cow position:chr21:36121305-36121511 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:152
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):146, 37

               
               
               Conread position:499-668
               
               
               Cow position:chr21:42017523-42017350 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:136
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):87, 35

               
               
               Conread position:499-676
               
               
               Cow position:chr21:30970015-30970194 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:137
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):140, 35

               
               
               Conread position:499-696
               
               
               Cow position:chr21:27744105-27744308 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:161
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):107, 35

               
               
               Conread position:499-696
               
               
               Cow position:chr21:48334712-48334503 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:154
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):118, 35

               
               
               Conread position:499-697
               
               
               Cow position:chr21:41737988-41738188 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:152
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):27, 32

               
               
               Conread position:500-618
               
               
               Cow position:chr21:12200181-12200298 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:119
               
               
               Alignm identity:93
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):34, 0

               
               
               Conread position:500-681
               
               
               Cow position:chr21:28882262-28882447 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:136
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):142, 34

               
               
               Conread position:500-684
               
               
               Cow position:chr21:26828890-26828702 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:141
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):143, 22

               
               
               Conread position:500-695
               
               
               Cow position:chr21:16796932-16797130 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:148
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):93, 34

               
               
               Conread position:501-679
               
               
               Cow position:chr21:48482448-48482268 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:139
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):142, 34

               
               
               Conread position:502-684
               
               
               Cow position:chr21:4108858-4109044 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:137
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):141, 32

               
               
               Conread position:503-697
               
               
               Cow position:chr21:15305215-15305015 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:142
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):116, 31

               
               
               Conread position:504-697
               
               
               Cow position:chr21:31278268-31278470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:146
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):46, 31

               
               
               Conread position:509-677
               
               
               Cow position:chr21:7460697-7460865 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:134
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):134, 25

               
               
               Conread position:509-680
               
               
               Cow position:chr21:15271347-15271176 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:132
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):134, 25

               
               
               Conread position:509-680
               
               
               Cow position:chr21:30938576-30938403 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:131
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):134, 25

               
               
               Conread position:509-693
               
               
               Cow position:chr21:13134691-13134873 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:140
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):149, 18

               
               
               Conread position:512-694
               
               
               Cow position:chr21:40930382-40930201 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:144
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):128, 22

               
               
               Conread position:512-697
               
               
               Cow position:chr21:3135776-3135590 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:141
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):131, 22

               
               
               Conread position:512-697
               
               
               Cow position:chr21:9873410-9873603 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):14, 153

               
               
               Conread position:513-676
               
               
               Cow position:chr21:37495852-37495685 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):21, 87

               
               
               Conread position:513-680
               
               
               Cow position:chr21:42905304-42905139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:121
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):130, 21

               
               
               Conread position:513-684
               
               
               Cow position:chr21:29011876-29011709 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):28, 18

               
               
               Conread position:513-684
               
               
               Cow position:chr21:29418662-29418840 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:146
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):130, 23

               
               
               Conread position:513-684
               
               
               Cow position:chr21:44732949-44732775 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):130, 9

               
               
               Conread position:513-694
               
               
               Cow position:chr21:31659057-31658877 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:139
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):131, 21

               
               
               Conread position:515-696
               
               
               Cow position:chr21:2787702-2787524 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:130
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):9, 98

               
               
               Conread position:515-697
               
               
               Cow position:chr21:31462658-31462838 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:136
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):143, 20

               
               
               Conread position:516-696
               
               
               Cow position:chr21:39845690-39845881 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:148
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):42, 18

               
               
               Conread position:518-680
               
               
               Cow position:chr21:18341318-18341482 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:119
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):125, 13

               
               
               Conread position:518-696
               
               
               Cow position:chr21:18056030-18055851 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):50, 16

               
               
               Conread position:519-618
               
               
               Cow position:chr21:652477-652379 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:100
               
               
               Alignm identity:85
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:519-684
               
               
               Cow position:chr21:6041884-6042056 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:137
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):89, 16

               
               
               Conread position:519-686
               
               
               Cow position:chr21:646217-646047 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:126
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):125, 15

               
               
               Conread position:519-692
               
               
               Cow position:chr21:16120061-16119886 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:146
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):124, 15

               
               
               Conread position:519-693
               
               
               Cow position:chr21:17748281-17748458 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:127
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):34, 15

               
               
               Conread position:519-695
               
               
               Cow position:chr21:32272020-32272210 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:144
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):84, 15

               
               
               Conread position:519-697
               
               
               Cow position:chr21:45537284-45537470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):28, 12

               
               
               Conread position:521-688
               
               
               Cow position:chr21:36398461-36398299 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:122
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):137, 13

               
               
               Conread position:522-668
               
               
               Cow position:chr21:31258569-31258720 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:116
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):112, 12

               
               
               Conread position:531-684
               
               
               Cow position:chr21:28604202-28604349 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:124
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):112, 67

               
               
               Conread position:533-668
               
               
               Cow position:chr21:3016073-3015943 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:105
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):79, 0

               
               
               Conread position:533-680
               
               
               Cow position:chr21:17856878-17857028 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:122
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):109, 38

               
               
               Conread position:533-684
               
               
               Cow position:chr21:12473947-12473793 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:121
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):110, 12

               
               
               Conread position:535-690
               
               
               Cow position:chr21:9314920-9315073 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:127
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):17, 79

               
               
               Conread position:535-694
               
               
               Cow position:chr21:3595920-3595769 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:126
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):108, 52

               
               
               Conread position:538-692
               
               
               Cow position:chr21:23783724-23783572 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:116
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):144, 86

               
               
               Conread position:540-694
               
               
               Cow position:chr21:46609884-46609727 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:126
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):103, 60

               
               
               Conread position:540-695
               
               
               Cow position:chr21:58562-58723 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:124
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):7, 38

               
               
               Conread position:541-681
               
               
               Cow position:chr21:42341817-42341677 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:116
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):102, 58

               
               
               Conread position:541-685
               
               
               Cow position:chr21:8438726-8438588 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:111
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):54, 23

               
               
               Conread position:541-693
               
               
               Cow position:chr21:30368197-30368350 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:115
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):66, 79

               
               
               Conread position:542-681
               
               
               Cow position:chr21:42920883-42920736 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:112
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:545-684
               
               
               Cow position:chr21:37479468-37479323 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:116
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):98, 0

               
               
               Conread position:550-683
               
               
               Cow position:chr21:41668761-41668894 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:111
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):93, 9

               
               
               Conread position:551-680
               
               
               Cow position:chr21:2904174-2904040 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:108
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):52, 42

               
               
               Conread position:551-694
               
               
               Cow position:chr21:40821764-40821619 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:111
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):92, 141

               
               
               Conread position:559-684
               
               
               Cow position:chr21:47761578-47761444 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:135
               
               
               Alignm identity:108
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):33, 0
Show alignments to all cow chromosomes.
Conread position:	11-680
Cow position:	chr21:13585422-13584789 (view UCSC Genome Browser custom track)
Alignm length:	690
Alignm identity:	469
Alignm E-value:	0
Alignm gaps (pig, cow):	413, 19
Conread position:	85-420
Cow position:	chr21:28907977-28907656 (view UCSC Genome Browser custom track)
Alignm length:	342
Alignm identity:	240
Alignm E-value:	7e-39
Alignm gaps (pig, cow):	15, 72
Conread position:	105-421
Cow position:	chr21:17697170-17696859 (view UCSC Genome Browser custom track)
Alignm length:	321
Alignm identity:	220
Alignm E-value:	2e-37
Alignm gaps (pig, cow):	63, 7
Conread position:	123-625
Cow position:	chr21:2927492-2927000 (view UCSC Genome Browser custom track)
Alignm length:	509
Alignm identity:	343
Alignm E-value:	0
Alignm gaps (pig, cow):	219, 48
Conread position:	129-479
Cow position:	chr21:21143597-21143960 (view UCSC Genome Browser custom track)
Alignm length:	372
Alignm identity:	253
Alignm E-value:	2e-35
Alignm gaps (pig, cow):	175, 35
Conread position:	135-660
Cow position:	chr21:22353510-22352998 (view UCSC Genome Browser custom track)
Alignm length:	539
Alignm identity:	359
Alignm E-value:	4.2039e-45
Alignm gaps (pig, cow):	88, 20
Conread position:	145-697
Cow position:	chr21:27521598-27521061 (view UCSC Genome Browser custom track)
Alignm length:	566
Alignm identity:	397
Alignm E-value:	0
Alignm gaps (pig, cow):	28, 104
Conread position:	147-553
Cow position:	chr21:18942100-18941701 (view UCSC Genome Browser custom track)
Alignm length:	415
Alignm identity:	291
Alignm E-value:	0
Alignm gaps (pig, cow):	76, 50
Conread position:	158-684
Cow position:	chr21:33791629-33791130 (view UCSC Genome Browser custom track)
Alignm length:	539
Alignm identity:	376
Alignm E-value:	0
Alignm gaps (pig, cow):	19, 161
Conread position:	160-550
Cow position:	chr21:24094998-24094630 (view UCSC Genome Browser custom track)
Alignm length:	399
Alignm identity:	277
Alignm E-value:	7e-39
Alignm gaps (pig, cow):	184, 54
Conread position:	163-597
Cow position:	chr21:46242488-46242064 (view UCSC Genome Browser custom track)
Alignm length:	440
Alignm identity:	286
Alignm E-value:	6e-37
Alignm gaps (pig, cow):	181, 28
Conread position:	165-694
Cow position:	chr21:14451978-14452509 (view UCSC Genome Browser custom track)
Alignm length:	545
Alignm identity:	380
Alignm E-value:	0
Alignm gaps (pig, cow):	63, 83
Conread position:	170-587
Cow position:	chr21:28955276-28955668 (view UCSC Genome Browser custom track)
Alignm length:	420
Alignm identity:	285
Alignm E-value:	9.99967e-42
Alignm gaps (pig, cow):	295, 136
Conread position:	172-617
Cow position:	chr21:10118313-10118761 (view UCSC Genome Browser custom track)
Alignm length:	460
Alignm identity:	329
Alignm E-value:	0
Alignm gaps (pig, cow):	170, 37
Conread position:	174-627
Cow position:	chr21:12801982-12801540 (view UCSC Genome Browser custom track)
Alignm length:	460
Alignm identity:	357
Alignm E-value:	0
Alignm gaps (pig, cow):	162, 35
Conread position:	174-697
Cow position:	chr21:14464342-14464866 (view UCSC Genome Browser custom track)
Alignm length:	540
Alignm identity:	374
Alignm E-value:	0
Alignm gaps (pig, cow):	161, 5
Conread position:	176-606
Cow position:	chr21:24598418-24598843 (view UCSC Genome Browser custom track)
Alignm length:	439
Alignm identity:	324
Alignm E-value:	0
Alignm gaps (pig, cow):	5, 141
Conread position:	179-626
Cow position:	chr21:33727701-33727256 (view UCSC Genome Browser custom track)
Alignm length:	456
Alignm identity:	306
Alignm E-value:	0
Alignm gaps (pig, cow):	27, 144
Conread position:	180-418
Cow position:	chr21:46829502-46829269 (view UCSC Genome Browser custom track)
Alignm length:	241
Alignm identity:	170
Alignm E-value:	9e-31
Alignm gaps (pig, cow):	71, 14
Conread position:	184-681
Cow position:	chr21:29002392-29001883 (view UCSC Genome Browser custom track)
Alignm length:	520
Alignm identity:	399
Alignm E-value:	0
Alignm gaps (pig, cow):	160, 25