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Cow genome map

           
Conread name:
           
Pig3-SRG8015N22
        

               
Conread position:
               
10-428
               

               
Cow position:
               
chr22:19376235-19376651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 89
               

               
Conread position:
               
10-618
               

               
Cow position:
               
chr22:32894746-32895348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 89
               

               
Conread position:
               
10-626
               

               
Cow position:
               
chr22:4650691-4651318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
10-687
               

               
Cow position:
               
chr22:30268965-30269606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
444, 80
               

               
Conread position:
               
10-696
               

               
Cow position:
               
chr22:6493721-6494387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
484, 89
               

               
Conread position:
               
71-487
               

               
Cow position:
               
chr22:1601786-1602190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
155, 28
               

               
Conread position:
               
96-694
               

               
Cow position:
               
chr22:6710150-6709581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 115
               

               
Conread position:
               
123-597
               

               
Cow position:
               
chr22:23861503-23861046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
142-466
               

               
Cow position:
               
chr22:19848734-19848417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 72
               

               
Conread position:
               
155-466
               

               
Cow position:
               
chr22:13210305-13210604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
157-617
               

               
Cow position:
               
chr22:23854659-23855099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
174-609
               

               
Cow position:
               
chr22:26658742-26659163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 142
               

               
Conread position:
               
178-591
               

               
Cow position:
               
chr22:845605-846007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 5
               

               
Conread position:
               
180-561
               

               
Cow position:
               
chr22:30963826-30964202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 135
               

               
Conread position:
               
181-597
               

               
Cow position:
               
chr22:27223832-27224237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 45
               

               
Conread position:
               
184-629
               

               
Cow position:
               
chr22:30111200-30111641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
154, 39
               

               
Conread position:
               
185-416
               

               
Cow position:
               
chr22:25341722-25341953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
179, 150
               

               
Conread position:
               
185-614
               

               
Cow position:
               
chr22:1590723-1591150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 41
               

               
Conread position:
               
185-680
               

               
Cow position:
               
chr22:34750379-34750884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 228
               

               
Conread position:
               
185-684
               

               
Cow position:
               
chr22:534193-534689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 267
               

               
Conread position:
               
185-696
               

               
Cow position:
               
chr22:22612813-22613312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 159
               

               
Conread position:
               
186-545
               

               
Cow position:
               
chr22:34597633-34597988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
189-388
               

               
Cow position:
               
chr22:6935922-6936116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
193-489
               

               
Cow position:
               
chr22:16057415-16057704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
151, 28
               

               
Conread position:
               
194-616
               

               
Cow position:
               
chr22:24176163-24175767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
197-494
               

               
Cow position:
               
chr22:6360770-6360479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 26
               

               
Conread position:
               
197-542
               

               
Cow position:
               
chr22:23829039-23829378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
197-619
               

               
Cow position:
               
chr22:2623800-2623390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
368, 50
               

               
Conread position:
               
197-624
               

               
Cow position:
               
chr22:22997195-22997613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
53, 22
               

               
Conread position:
               
199-446
               

               
Cow position:
               
chr22:35382535-35382285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
145, 48
               

               
Conread position:
               
203-671
               

               
Cow position:
               
chr22:46611061-46610590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 180
               

               
Conread position:
               
204-493
               

               
Cow position:
               
chr22:47582627-47582905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
209-443
               

               
Cow position:
               
chr22:13017055-13016836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
103, 38
               

               
Conread position:
               
209-606
               

               
Cow position:
               
chr22:21502462-21502863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
209-684
               

               
Cow position:
               
chr22:8882750-8883212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
210-438
               

               
Cow position:
               
chr22:25784195-25783969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
134, 11
               

               
Conread position:
               
211-678
               

               
Cow position:
               
chr22:34726402-34726869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 36
               

               
Conread position:
               
211-694
               

               
Cow position:
               
chr22:1654468-1653977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 36
               

               
Conread position:
               
211-694
               

               
Cow position:
               
chr22:45271305-45271783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
15, 109
               

               
Conread position:
               
211-697
               

               
Cow position:
               
chr22:27173157-27172664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
124, 79
               

               
Conread position:
               
212-588
               

               
Cow position:
               
chr22:12946437-12946081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 109
               

               
Conread position:
               
212-626
               

               
Cow position:
               
chr22:5337869-5337460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 102
               

               
Conread position:
               
212-641
               

               
Cow position:
               
chr22:33332534-33332994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 57
               

               
Conread position:
               
214-390
               

               
Cow position:
               
chr22:1857782-1857955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
98, 33
               

               
Conread position:
               
214-399
               

               
Cow position:
               
chr22:33986034-33985847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 32
               

               
Conread position:
               
214-406
               

               
Cow position:
               
chr22:41417407-41417211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
214-412
               

               
Cow position:
               
chr22:852760-852956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
152, 112
               

               
Conread position:
               
214-412
               

               
Cow position:
               
chr22:30583221-30583420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
127, 116
               

               
Conread position:
               
214-415
               

               
Cow position:
               
chr22:34665783-34665980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
150, 33
               

               
Conread position:
               
214-417
               

               
Cow position:
               
chr22:25658804-25658601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
130, 106
               

               
Conread position:
               
214-419
               

               
Cow position:
               
chr22:31513362-31513151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 179
               

               
Conread position:
               
214-421
               

               
Cow position:
               
chr22:8303113-8302915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
156, 26
               

               
Conread position:
               
214-428
               

               
Cow position:
               
chr22:6204563-6204351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
151, 108
               

               
Conread position:
               
214-428
               

               
Cow position:
               
chr22:15919904-15919686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
214-428
               

               
Cow position:
               
chr22:42923128-42922912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 43
               

               
Conread position:
               
214-432
               

               
Cow position:
               
chr22:22279044-22279266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
214-432
               

               
Cow position:
               
chr22:45365853-45366075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
214-438
               

               
Cow position:
               
chr22:11500513-11500735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 44
               

               
Conread position:
               
214-438
               

               
Cow position:
               
chr22:13242167-13242395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
130, 110
               

               
Conread position:
               
214-453
               

               
Cow position:
               
chr22:1791720-1791960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 33
               

               
Conread position:
               
214-468
               

               
Cow position:
               
chr22:29553222-29552967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
131, 223
               

               
Conread position:
               
214-471
               

               
Cow position:
               
chr22:1342470-1342721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 47
               

               
Conread position:
               
214-481
               

               
Cow position:
               
chr22:4337839-4338107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
128, 29
               

               
Conread position:
               
214-487
               

               
Cow position:
               
chr22:39494473-39494197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 214
               

               
Conread position:
               
214-489
               

               
Cow position:
               
chr22:9734587-9734857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 16
               

               
Conread position:
               
214-506
               

               
Cow position:
               
chr22:36569811-36569531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 95
               

               
Conread position:
               
214-530
               

               
Cow position:
               
chr22:13011546-13011224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 179
               

               
Conread position:
               
214-532
               

               
Cow position:
               
chr22:1986739-1987040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
15, 117
               

               
Conread position:
               
214-533
               

               
Cow position:
               
chr22:41271259-41270954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
214-537
               

               
Cow position:
               
chr22:226705-226404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
274, 37
               

               
Conread position:
               
214-548
               

               
Cow position:
               
chr22:29013610-29013941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
130, 19
               

               
Conread position:
               
214-550
               

               
Cow position:
               
chr22:9685751-9686092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
52, 43
               

               
Conread position:
               
214-550
               

               
Cow position:
               
chr22:32210548-32210883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
130, 223
               

               
Conread position:
               
214-553
               

               
Cow position:
               
chr22:14882380-14882050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 110
               

               
Conread position:
               
214-553
               

               
Cow position:
               
chr22:42605365-42605703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
214-555
               

               
Cow position:
               
chr22:3993341-3993678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 103
               

               
Conread position:
               
214-558
               

               
Cow position:
               
chr22:7838336-7838661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 113
               

               
Conread position:
               
214-575
               

               
Cow position:
               
chr22:43292171-43291814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 245
               

               
Conread position:
               
214-576
               

               
Cow position:
               
chr22:22160452-22160815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 33
               

               
Conread position:
               
214-600
               

               
Cow position:
               
chr22:24734580-24734204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 31
               

               
Conread position:
               
214-606
               

               
Cow position:
               
chr22:1279655-1279266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 59
               

               
Conread position:
               
214-606
               

               
Cow position:
               
chr22:14924993-14924613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 62
               

               
Conread position:
               
214-606
               

               
Cow position:
               
chr22:40071700-40072096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 188
               

               
Conread position:
               
214-608
               

               
Cow position:
               
chr22:8481379-8481763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 12
               

               
Conread position:
               
214-609
               

               
Cow position:
               
chr22:10920133-10919733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 221
               

               
Conread position:
               
214-610
               

               
Cow position:
               
chr22:23856779-23857170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 113
               

               
Conread position:
               
214-610
               

               
Cow position:
               
chr22:31646225-31646614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 130
               

               
Conread position:
               
214-611
               

               
Cow position:
               
chr22:8840318-8840729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
214-611
               

               
Cow position:
               
chr22:35753575-35753179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 78
               

               
Conread position:
               
214-614
               

               
Cow position:
               
chr22:877254-877642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
214-615
               

               
Cow position:
               
chr22:4017206-4017601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 116
               

               
Conread position:
               
214-616
               

               
Cow position:
               
chr22:30818996-30818595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
125, 98
               

               
Conread position:
               
214-617
               

               
Cow position:
               
chr22:32651238-32651621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
152, 97
               

               
Conread position:
               
214-618
               

               
Cow position:
               
chr22:3316860-3317251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 49
               

               
Conread position:
               
214-618
               

               
Cow position:
               
chr22:3949972-3950383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 243
               

               
Conread position:
               
214-627
               

               
Cow position:
               
chr22:17764106-17764516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 33
               

               
Conread position:
               
214-641
               

               
Cow position:
               
chr22:30514986-30515420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 31
               

               
Conread position:
               
214-641
               

               
Cow position:
               
chr22:38930783-38930353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 216
               

               
Conread position:
               
214-642
               

               
Cow position:
               
chr22:4119837-4119411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 103
               

               
Conread position:
               
214-655
               

               
Cow position:
               
chr22:32189108-32188687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 87
               

               
Conread position:
               
214-668
               

               
Cow position:
               
chr22:10631106-10631572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 33
               

               
Conread position:
               
214-670
               

               
Cow position:
               
chr22:13670439-13669981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 108
               

               
Conread position:
               
214-674
               

               
Cow position:
               
chr22:10532227-10532683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
214-676
               

               
Cow position:
               
chr22:10937102-10936657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 189
               

               
Conread position:
               
214-676
               

               
Cow position:
               
chr22:21012121-21012577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 108
               

               
Conread position:
               
214-677
               

               
Cow position:
               
chr22:32480734-32480274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 63
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr22:2095280-2095752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 94
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr22:18926082-18926552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 169
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr22:19340931-19341390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr22:22861180-22860715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 36
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr22:34616040-34616511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 101
               

               
Conread position:
               
214-681
               

               
Cow position:
               
chr22:3315859-3316290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
387, 86
               

               
Conread position:
               
214-681
               

               
Cow position:
               
chr22:33485872-33485428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 69
               

               
Conread position:
               
214-682
               

               
Cow position:
               
chr22:13735533-13735083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
151, 33
               

               
Conread position:
               
214-682
               

               
Cow position:
               
chr22:16273365-16273839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 38
               

               
Conread position:
               
214-683
               

               
Cow position:
               
chr22:10161696-10162167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 33
               

               
Conread position:
               
214-683
               

               
Cow position:
               
chr22:17152410-17152887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 80
               

               
Conread position:
               
214-683
               

               
Cow position:
               
chr22:21890628-21890167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr22:1651249-1651689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
130, 40
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr22:4043664-4044123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 93
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr22:4535595-4535121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 33
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr22:8323979-8324448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 33
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr22:11613159-11613626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 37
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr22:25943212-25943661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 103
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr22:27322050-27322498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr22:39472645-39472159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 116
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr22:40374337-40374806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 114
               

               
Conread position:
               
214-685
               

               
Cow position:
               
chr22:864787-864329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 98
               

               
Conread position:
               
214-690
               

               
Cow position:
               
chr22:16251832-16251359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 33
               

               
Conread position:
               
214-691
               

               
Cow position:
               
chr22:9372251-9372735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 43
               

               
Conread position:
               
214-692
               

               
Cow position:
               
chr22:28370677-28371139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 169
               

               
Conread position:
               
214-693
               

               
Cow position:
               
chr22:3301591-3301128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 39
               

               
Conread position:
               
214-693
               

               
Cow position:
               
chr22:44740837-44741278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 26
               

               
Conread position:
               
214-694
               

               
Cow position:
               
chr22:3842357-3842826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 157
               

               
Conread position:
               
214-694
               

               
Cow position:
               
chr22:4061208-4060739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 26
               

               
Conread position:
               
214-694
               

               
Cow position:
               
chr22:5290575-5291066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 33
               

               
Conread position:
               
214-694
               

               
Cow position:
               
chr22:23806816-23806327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 214
               

               
Conread position:
               
214-694
               

               
Cow position:
               
chr22:24611345-24610871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 102
               

               
Conread position:
               
214-694
               

               
Cow position:
               
chr22:39508303-39507831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 80
               

               
Conread position:
               
214-695
               

               
Cow position:
               
chr22:15960040-15959558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
126, 71
               

               
Conread position:
               
214-695
               

               
Cow position:
               
chr22:38940218-38939736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 98
               

               
Conread position:
               
214-696
               

               
Cow position:
               
chr22:10122119-10122580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 115
               

               
Conread position:
               
214-696
               

               
Cow position:
               
chr22:18258959-18259426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 103
               

               
Conread position:
               
214-696
               

               
Cow position:
               
chr22:26134504-26134007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 238
               

               
Conread position:
               
214-697
               

               
Cow position:
               
chr22:1309996-1309523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
214-697
               

               
Cow position:
               
chr22:1484593-1485081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 122
               

               
Conread position:
               
214-697
               

               
Cow position:
               
chr22:6622514-6622038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 33
               

               
Conread position:
               
214-697
               

               
Cow position:
               
chr22:11146633-11147123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 332
               

               
Conread position:
               
214-697
               

               
Cow position:
               
chr22:12682061-12681587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 56
               

               
Conread position:
               
214-697
               

               
Cow position:
               
chr22:15950646-15950175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 93
               

               
Conread position:
               
214-697
               

               
Cow position:
               
chr22:32661247-32661725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 26
               

               
Conread position:
               
215-402
               

               
Cow position:
               
chr22:8357346-8357532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
120, 125
               

               
Conread position:
               
215-404
               

               
Cow position:
               
chr22:14005883-14006071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 66
               

               
Conread position:
               
215-404
               

               
Cow position:
               
chr22:19714658-19714844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
215-419
               

               
Cow position:
               
chr22:34931016-34930809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
215-419
               

               
Cow position:
               
chr22:35533625-35533425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
215-432
               

               
Cow position:
               
chr22:11987485-11987266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
215-439
               

               
Cow position:
               
chr22:30472778-30473001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
135, 97
               

               
Conread position:
               
215-446
               

               
Cow position:
               
chr22:44835374-44835609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
215-476
               

               
Cow position:
               
chr22:1974419-1974153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
124, 258
               

               
Conread position:
               
215-487
               

               
Cow position:
               
chr22:30712483-30712760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
127, 237
               

               
Conread position:
               
215-503
               

               
Cow position:
               
chr22:29091141-29090879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
6, 31
               

               
Conread position:
               
215-504
               

               
Cow position:
               
chr22:26490193-26490482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
129, 85
               

               
Conread position:
               
215-525
               

               
Cow position:
               
chr22:30954771-30955066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 107
               

               
Conread position:
               
215-550
               

               
Cow position:
               
chr22:31213304-31213642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
37, 215
               

               
Conread position:
               
215-560
               

               
Cow position:
               
chr22:34398723-34398383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 106
               

               
Conread position:
               
215-600
               

               
Cow position:
               
chr22:19048071-19047703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
244, 32
               

               
Conread position:
               
215-604
               

               
Cow position:
               
chr22:25743221-25742832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 203
               

               
Conread position:
               
215-608
               

               
Cow position:
               
chr22:17813960-17814353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 102
               

               
Conread position:
               
215-611
               

               
Cow position:
               
chr22:1266203-1265800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 32
               

               
Conread position:
               
215-611
               

               
Cow position:
               
chr22:6123163-6122761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 32
               

               
Conread position:
               
215-618
               

               
Cow position:
               
chr22:27329151-27328762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 32
               

               
Conread position:
               
215-650
               

               
Cow position:
               
chr22:4292505-4292915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
280, 39
               

               
Conread position:
               
215-680
               

               
Cow position:
               
chr22:14691245-14690763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 219
               

               
Conread position:
               
215-682
               

               
Cow position:
               
chr22:30698911-30699363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
215-683
               

               
Cow position:
               
chr22:43397751-43398198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 30
               

               
Conread position:
               
215-685
               

               
Cow position:
               
chr22:7153621-7154076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
215-687
               

               
Cow position:
               
chr22:21746371-21746841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
215-687
               

               
Cow position:
               
chr22:31870515-31870051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
420, 35
               

               
Conread position:
               
215-694
               

               
Cow position:
               
chr22:1326151-1326629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 38
               

               
Conread position:
               
215-695
               

               
Cow position:
               
chr22:41045182-41044697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 117
               

               
Conread position:
               
215-696
               

               
Cow position:
               
chr22:15490391-15490869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 121
               

               
Conread position:
               
215-696
               

               
Cow position:
               
chr22:32892432-32892908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 25
               

               
Conread position:
               
215-697
               

               
Cow position:
               
chr22:5282239-5282726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 97
               

               
Conread position:
               
215-697
               

               
Cow position:
               
chr22:10302742-10303229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 245
               

               
Conread position:
               
215-697
               

               
Cow position:
               
chr22:14844306-14844758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
129, 32
               

               
Conread position:
               
215-697
               

               
Cow position:
               
chr22:18837987-18838461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 51
               

               
Conread position:
               
215-697
               

               
Cow position:
               
chr22:46626637-46626162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
247, 40
               

               
Conread position:
               
216-425
               

               
Cow position:
               
chr22:44936912-44937124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
216-441
               

               
Cow position:
               
chr22:8063591-8063367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
164, 14
               

               
Conread position:
               
216-445
               

               
Cow position:
               
chr22:11837468-11837246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
156, 100
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr22:8446665-8446915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
216-524
               

               
Cow position:
               
chr22:3960561-3960245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
36, 236
               

               
Conread position:
               
216-579
               

               
Cow position:
               
chr22:7884724-7885082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 106
               

               
Conread position:
               
216-602
               

               
Cow position:
               
chr22:26141007-26141389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 17
               

               
Conread position:
               
216-602
               

               
Cow position:
               
chr22:34476267-34475883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 31
               

               
Conread position:
               
216-603
               

               
Cow position:
               
chr22:46568156-46567777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 157
               

               
Conread position:
               
216-615
               

               
Cow position:
               
chr22:38107429-38107810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 96
               

               
Conread position:
               
216-618
               

               
Cow position:
               
chr22:27431950-27431574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 108
               

               
Conread position:
               
216-638
               

               
Cow position:
               
chr22:15039453-15039036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 104
               

               
Conread position:
               
216-641
               

               
Cow position:
               
chr22:24509927-24509507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
126, 77
               

               
Conread position:
               
216-647
               

               
Cow position:
               
chr22:14366221-14365794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 170
               

               
Conread position:
               
216-680
               

               
Cow position:
               
chr22:3251256-3250784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 34
               

               
Conread position:
               
216-680
               

               
Cow position:
               
chr22:8733589-8733150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 41
               

               
Conread position:
               
216-681
               

               
Cow position:
               
chr22:6215821-6215360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
216-684
               

               
Cow position:
               
chr22:14091498-14091019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 31
               

               
Conread position:
               
216-684
               

               
Cow position:
               
chr22:28640419-28639956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
216-685
               

               
Cow position:
               
chr22:8877004-8877449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 187
               

               
Conread position:
               
216-686
               

               
Cow position:
               
chr22:27171526-27171067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 103
               

               
Conread position:
               
216-692
               

               
Cow position:
               
chr22:27818736-27819204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 108
               

               
Conread position:
               
216-695
               

               
Cow position:
               
chr22:2403606-2404093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
216-695
               

               
Cow position:
               
chr22:4356832-4357295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 85
               

               
Conread position:
               
216-696
               

               
Cow position:
               
chr22:6754522-6754052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 109
               

               
Conread position:
               
216-696
               

               
Cow position:
               
chr22:34608714-34609208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
94, 224
               

               
Conread position:
               
216-697
               

               
Cow position:
               
chr22:23249979-23249525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 41
               

               
Conread position:
               
216-697
               

               
Cow position:
               
chr22:25246643-25247122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 31
               

               
Conread position:
               
217-412
               

               
Cow position:
               
chr22:36208674-36208865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
127, 30
               

               
Conread position:
               
217-428
               

               
Cow position:
               
chr22:11200777-11200979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
128, 54
               

               
Conread position:
               
217-467
               

               
Cow position:
               
chr22:1081232-1081482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
34, 5
               

               
Conread position:
               
217-610
               

               
Cow position:
               
chr22:13769212-13769601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
217-618
               

               
Cow position:
               
chr22:16044695-16044285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
217-648
               

               
Cow position:
               
chr22:29290402-29289990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 30
               

               
Conread position:
               
217-681
               

               
Cow position:
               
chr22:4076164-4075688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 30
               

               
Conread position:
               
217-684
               

               
Cow position:
               
chr22:26151384-26150916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 27
               

               
Conread position:
               
217-684
               

               
Cow position:
               
chr22:33949269-33948777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
217-685
               

               
Cow position:
               
chr22:13957916-13957444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 157
               

               
Conread position:
               
217-687
               

               
Cow position:
               
chr22:21415368-21415822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
217-696
               

               
Cow position:
               
chr22:3987246-3987733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 234
               

               
Conread position:
               
218-486
               

               
Cow position:
               
chr22:1822138-1821872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 10
               

               
Conread position:
               
218-639
               

               
Cow position:
               
chr22:1068180-1067764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 29
               

               
Conread position:
               
218-676
               

               
Cow position:
               
chr22:20626576-20627025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 104
               

               
Conread position:
               
218-684
               

               
Cow position:
               
chr22:8732826-8732364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 29
               

               
Conread position:
               
219-617
               

               
Cow position:
               
chr22:37324283-37324671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 50
               

               
Conread position:
               
219-680
               

               
Cow position:
               
chr22:6721329-6720885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 28
               

               
Conread position:
               
219-684
               

               
Cow position:
               
chr22:14371903-14372367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 224
               

               
Conread position:
               
220-615
               

               
Cow position:
               
chr22:28351918-28351539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 6
               

               
Conread position:
               
220-684
               

               
Cow position:
               
chr22:3325318-3325787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 135
               

               
Conread position:
               
220-684
               

               
Cow position:
               
chr22:42684636-42685082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 213
               

               
Conread position:
               
220-696
               

               
Cow position:
               
chr22:41971417-41970947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 25
               

               
Conread position:
               
221-617
               

               
Cow position:
               
chr22:3253197-3252829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
149, 13
               

               
Conread position:
               
222-422
               

               
Cow position:
               
chr22:1991228-1991415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
222-445
               

               
Cow position:
               
chr22:43044425-43044202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
147, 25
               

               
Conread position:
               
222-686
               

               
Cow position:
               
chr22:44717450-44717922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 35
               

               
Conread position:
               
222-694
               

               
Cow position:
               
chr22:23181295-23180835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 25
               

               
Conread position:
               
222-695
               

               
Cow position:
               
chr22:33448336-33447867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 89
               

               
Conread position:
               
223-612
               

               
Cow position:
               
chr22:30049833-30049441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 231
               

               
Conread position:
               
225-406
               

               
Cow position:
               
chr22:28938164-28937976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
106, 53
               

               
Conread position:
               
225-412
               

               
Cow position:
               
chr22:11489286-11489461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
225-421
               

               
Cow position:
               
chr22:36761375-36761565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
145, 22
               

               
Conread position:
               
225-446
               

               
Cow position:
               
chr22:35520521-35520292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
82, 205
               

               
Conread position:
               
225-446
               

               
Cow position:
               
chr22:47927503-47927719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
225-458
               

               
Cow position:
               
chr22:39303264-39303029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
120, 63
               

               
Conread position:
               
225-472
               

               
Cow position:
               
chr22:30689373-30689622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 191
               

               
Conread position:
               
225-483
               

               
Cow position:
               
chr22:45685290-45685024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
225-548
               

               
Cow position:
               
chr22:26097871-26097559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 22
               

               
Conread position:
               
225-550
               

               
Cow position:
               
chr22:15760098-15760425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
97, 43
               

               
Conread position:
               
225-560
               

               
Cow position:
               
chr22:17993288-17992958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 78
               

               
Conread position:
               
225-562
               

               
Cow position:
               
chr22:31593119-31592781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 287
               

               
Conread position:
               
225-582
               

               
Cow position:
               
chr22:7518158-7518514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
116, 146
               

               
Conread position:
               
225-583
               

               
Cow position:
               
chr22:21407950-21408321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
225-597
               

               
Cow position:
               
chr22:42612200-42612569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 32
               

               
Conread position:
               
225-600
               

               
Cow position:
               
chr22:21355399-21355028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 29
               

               
Conread position:
               
225-601
               

               
Cow position:
               
chr22:34712456-34712839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 78
               

               
Conread position:
               
225-610
               

               
Cow position:
               
chr22:2216566-2216933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
379, 119
               

               
Conread position:
               
225-610
               

               
Cow position:
               
chr22:12968327-12967945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 21
               

               
Conread position:
               
225-611
               

               
Cow position:
               
chr22:10420762-10421157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 116
               

               
Conread position:
               
225-615
               

               
Cow position:
               
chr22:21295982-21295597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
225-618
               

               
Cow position:
               
chr22:23176709-23176309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 208
               

               
Conread position:
               
225-619
               

               
Cow position:
               
chr22:41244988-41245388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
225-621
               

               
Cow position:
               
chr22:11778868-11778479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 15
               

               
Conread position:
               
225-621
               

               
Cow position:
               
chr22:34606335-34606725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 22
               

               
Conread position:
               
225-623
               

               
Cow position:
               
chr22:38980649-38981022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
225-629
               

               
Cow position:
               
chr22:7302103-7301698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
26, 206
               

               
Conread position:
               
225-638
               

               
Cow position:
               
chr22:13861330-13861731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 53
               

               
Conread position:
               
225-663
               

               
Cow position:
               
chr22:45513778-45513345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
225-666
               

               
Cow position:
               
chr22:28058299-28057860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 22
               

               
Conread position:
               
225-669
               

               
Cow position:
               
chr22:30093988-30094428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
225-677
               

               
Cow position:
               
chr22:23805242-23804792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 118
               

               
Conread position:
               
225-679
               

               
Cow position:
               
chr22:8418210-8418659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
123, 79
               

               
Conread position:
               
225-680
               

               
Cow position:
               
chr22:5596047-5595612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
417, 22
               

               
Conread position:
               
225-680
               

               
Cow position:
               
chr22:11370849-11370396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 199
               

               
Conread position:
               
225-680
               

               
Cow position:
               
chr22:13286185-13286644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 286
               

               
Conread position:
               
225-680
               

               
Cow position:
               
chr22:17852880-17852442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 22
               

               
Conread position:
               
225-680
               

               
Cow position:
               
chr22:23138460-23137990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
225-681
               

               
Cow position:
               
chr22:2502580-2503022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 22
               

               
Conread position:
               
225-681
               

               
Cow position:
               
chr22:7967440-7967893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 21
               

               
Conread position:
               
225-681
               

               
Cow position:
               
chr22:9977562-9977991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 22
               

               
Conread position:
               
225-681
               

               
Cow position:
               
chr22:23833038-23833484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
139, 26
               

               
Conread position:
               
225-683
               

               
Cow position:
               
chr22:26339501-26339963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
225-684
               

               
Cow position:
               
chr22:8138516-8138055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 105
               

               
Conread position:
               
225-684
               

               
Cow position:
               
chr22:12572945-12573405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 248
               

               
Conread position:
               
225-684
               

               
Cow position:
               
chr22:14179089-14178632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 22
               

               
Conread position:
               
225-684
               

               
Cow position:
               
chr22:19653239-19652790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 36
               

               
Conread position:
               
225-684
               

               
Cow position:
               
chr22:23759270-23758807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 73
               

               
Conread position:
               
225-684
               

               
Cow position:
               
chr22:29641852-29642314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
225-684
               

               
Cow position:
               
chr22:41982973-41982523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 111
               

               
Conread position:
               
225-684
               

               
Cow position:
               
chr22:45132908-45132450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
112, 29
               

               
Conread position:
               
225-685
               

               
Cow position:
               
chr22:9127148-9127599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
225-685
               

               
Cow position:
               
chr22:16912051-16911599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
270, 22
               

               
Conread position:
               
225-686
               

               
Cow position:
               
chr22:10339370-10338905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
225-686
               

               
Cow position:
               
chr22:38439416-38438957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 164
               

               
Conread position:
               
225-687
               

               
Cow position:
               
chr22:34441893-34441430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
225-693
               

               
Cow position:
               
chr22:1975354-1975830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 111
               

               
Conread position:
               
225-694
               

               
Cow position:
               
chr22:27635228-27635688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
225-695
               

               
Cow position:
               
chr22:37029860-37029395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 22
               

               
Conread position:
               
225-697
               

               
Cow position:
               
chr22:11697467-11696981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
225-697
               

               
Cow position:
               
chr22:15568277-15567807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
225-697
               

               
Cow position:
               
chr22:23115563-23115094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 107
               

               
Conread position:
               
225-697
               

               
Cow position:
               
chr22:31194814-31195269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 205
               

               
Conread position:
               
226-419
               

               
Cow position:
               
chr22:15292953-15292765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
226-591
               

               
Cow position:
               
chr22:4645520-4645875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 91
               

               
Conread position:
               
226-597
               

               
Cow position:
               
chr22:15090483-15090852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 98
               

               
Conread position:
               
226-627
               

               
Cow position:
               
chr22:44180336-44180736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 112
               

               
Conread position:
               
226-676
               

               
Cow position:
               
chr22:25361234-25361669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 21
               

               
Conread position:
               
226-680
               

               
Cow position:
               
chr22:38977592-38978038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
112, 85
               

               
Conread position:
               
226-694
               

               
Cow position:
               
chr22:4563105-4563566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 93
               

               
Conread position:
               
226-694
               

               
Cow position:
               
chr22:8412267-8412737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 226
               

               
Conread position:
               
226-696
               

               
Cow position:
               
chr22:24066492-24066035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
226-696
               

               
Cow position:
               
chr22:36193604-36194041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
227-434
               

               
Cow position:
               
chr22:44386654-44386456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
227-438
               

               
Cow position:
               
chr22:1710319-1710529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
141, 20
               

               
Conread position:
               
227-484
               

               
Cow position:
               
chr22:28731430-28731674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
225, 16
               

               
Conread position:
               
227-554
               

               
Cow position:
               
chr22:911846-912165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 93
               

               
Conread position:
               
227-618
               

               
Cow position:
               
chr22:17295184-17294806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 20
               

               
Conread position:
               
227-642
               

               
Cow position:
               
chr22:4990427-4990016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 20
               

               
Conread position:
               
227-683
               

               
Cow position:
               
chr22:7913222-7913653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
109, 20
               

               
Conread position:
               
227-684
               

               
Cow position:
               
chr22:27581193-27581625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 30
               

               
Conread position:
               
227-686
               

               
Cow position:
               
chr22:28071298-28071760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 132
               

               
Conread position:
               
227-691
               

               
Cow position:
               
chr22:6092898-6092456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
121, 30
               

               
Conread position:
               
227-695
               

               
Cow position:
               
chr22:59350-59824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 128
               

               
Conread position:
               
227-695
               

               
Cow position:
               
chr22:37201601-37202059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 55
               

               
Conread position:
               
227-697
               

               
Cow position:
               
chr22:26786097-26786571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 164
               

               
Conread position:
               
228-456
               

               
Cow position:
               
chr22:21905239-21905469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 115
               

               
Conread position:
               
228-461
               

               
Cow position:
               
chr22:28179588-28179829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
89, 108
               

               
Conread position:
               
228-489
               

               
Cow position:
               
chr22:29256569-29256308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
115, 19
               

               
Conread position:
               
228-618
               

               
Cow position:
               
chr22:8116337-8115957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
228-666
               

               
Cow position:
               
chr22:28146429-28146864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 94
               

               
Conread position:
               
228-681
               

               
Cow position:
               
chr22:10294795-10295225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 98
               

               
Conread position:
               
228-697
               

               
Cow position:
               
chr22:21567748-21568205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 30
               

               
Conread position:
               
229-606
               

               
Cow position:
               
chr22:30483658-30484034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 222
               

               
Conread position:
               
229-618
               

               
Cow position:
               
chr22:28665015-28665415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 228
               

               
Conread position:
               
229-685
               

               
Cow position:
               
chr22:6960614-6961073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 84
               

               
Conread position:
               
229-697
               

               
Cow position:
               
chr22:14143360-14142911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
414, 80
               

               
Conread position:
               
230-446
               

               
Cow position:
               
chr22:9251266-9251052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
114, 100
               

               
Conread position:
               
230-626
               

               
Cow position:
               
chr22:590090-590476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
230-676
               

               
Cow position:
               
chr22:16620920-16621384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 108
               

               
Conread position:
               
230-684
               

               
Cow position:
               
chr22:6328018-6327574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
230-684
               

               
Cow position:
               
chr22:40048310-40048758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 99
               

               
Conread position:
               
230-697
               

               
Cow position:
               
chr22:40121132-40120661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
231-618
               

               
Cow position:
               
chr22:3964933-3965317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 114
               

               
Conread position:
               
231-688
               

               
Cow position:
               
chr22:10323654-10324112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 91
               

               
Conread position:
               
232-395
               

               
Cow position:
               
chr22:34618482-34618643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
110, 97
               

               
Conread position:
               
233-424
               

               
Cow position:
               
chr22:2433790-2433981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
131, 37
               

               
Conread position:
               
233-424
               

               
Cow position:
               
chr22:21526841-21526652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
233-520
               

               
Cow position:
               
chr22:27291851-27292125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
233-527
               

               
Cow position:
               
chr22:295187-294892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
138, 193
               

               
Conread position:
               
233-684
               

               
Cow position:
               
chr22:17950207-17949777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 87
               

               
Conread position:
               
233-691
               

               
Cow position:
               
chr22:39696046-39696503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 53
               

               
Conread position:
               
235-606
               

               
Cow position:
               
chr22:7851711-7852081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 195
               

               
Conread position:
               
235-617
               

               
Cow position:
               
chr22:2627328-2627713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
235-678
               

               
Cow position:
               
chr22:25222149-25221709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 12
               

               
Conread position:
               
238-438
               

               
Cow position:
               
chr22:4161857-4161657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
98, 9
               

               
Conread position:
               
238-541
               

               
Cow position:
               
chr22:11746151-11745850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
238-553
               

               
Cow position:
               
chr22:39293992-39293678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
110, 188
               

               
Conread position:
               
238-618
               

               
Cow position:
               
chr22:13840893-13841269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 9
               

               
Conread position:
               
238-680
               

               
Cow position:
               
chr22:40349105-40349537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 74
               

               
Conread position:
               
238-684
               

               
Cow position:
               
chr22:27550111-27550561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
108, 28
               

               
Conread position:
               
238-696
               

               
Cow position:
               
chr22:11130627-11131077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 9
               

               
Conread position:
               
238-697
               

               
Cow position:
               
chr22:36560905-36560439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 21
               

               
Conread position:
               
239-596
               

               
Cow position:
               
chr22:5384410-5384761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 82
               

               
Conread position:
               
240-694
               

               
Cow position:
               
chr22:7164710-7165181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
243-440
               

               
Cow position:
               
chr22:12777823-12777633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
69, 76
               

               
Conread position:
               
243-441
               

               
Cow position:
               
chr22:4026368-4026563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
243-465
               

               
Cow position:
               
chr22:2141574-2141793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
101, 77
               

               
Conread position:
               
243-525
               

               
Cow position:
               
chr22:25630012-25629725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 213
               

               
Conread position:
               
243-668
               

               
Cow position:
               
chr22:7882309-7882734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 156
               

               
Conread position:
               
243-677
               

               
Cow position:
               
chr22:5467609-5467172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
85, 64
               

               
Conread position:
               
243-680
               

               
Cow position:
               
chr22:28356795-28357223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 186
               

               
Conread position:
               
243-696
               

               
Cow position:
               
chr22:10983103-10983575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 153
               

               
Conread position:
               
244-479
               

               
Cow position:
               
chr22:32952239-32952469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
175, 80
               

               
Conread position:
               
244-488
               

               
Cow position:
               
chr22:37554865-37554618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
100, 142
               

               
Conread position:
               
244-506
               

               
Cow position:
               
chr22:19738817-19738549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
96, 186
               

               
Conread position:
               
244-596
               

               
Cow position:
               
chr22:2148334-2148677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 126
               

               
Conread position:
               
244-695
               

               
Cow position:
               
chr22:43812657-43812231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 58
               

               
Conread position:
               
244-697
               

               
Cow position:
               
chr22:16532841-16533282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 68
               

               
Conread position:
               
244-697
               

               
Cow position:
               
chr22:47555606-47556068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
245-555
               

               
Cow position:
               
chr22:47741178-47741488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
67, 56
               

               
Conread position:
               
245-683
               

               
Cow position:
               
chr22:36632994-36633399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
247-443
               

               
Cow position:
               
chr22:22145990-22146191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
247-450
               

               
Cow position:
               
chr22:2010563-2010767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
97, 55
               

               
Conread position:
               
247-460
               

               
Cow position:
               
chr22:20687057-20687279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
117, 218
               

               
Conread position:
               
247-594
               

               
Cow position:
               
chr22:11458587-11458922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
247-610
               

               
Cow position:
               
chr22:20862985-20862632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
121, 62
               

               
Conread position:
               
248-432
               

               
Cow position:
               
chr22:38549558-38549740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
248-588
               

               
Cow position:
               
chr22:41137080-41137422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
87, 100
               

               
Conread position:
               
248-597
               

               
Cow position:
               
chr22:14118739-14119086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
97, 126
               

               
Conread position:
               
248-631
               

               
Cow position:
               
chr22:14245660-14245305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 64
               

               
Conread position:
               
248-695
               

               
Cow position:
               
chr22:25237376-25236917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 74
               

               
Conread position:
               
249-692
               

               
Cow position:
               
chr22:10567925-10567509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 47
               

               
Conread position:
               
249-697
               

               
Cow position:
               
chr22:10963193-10962744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
250-684
               

               
Cow position:
               
chr22:36539906-36539457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 105
               

               
Conread position:
               
251-407
               

               
Cow position:
               
chr22:23124412-23124254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
83, 15
               

               
Conread position:
               
251-469
               

               
Cow position:
               
chr22:12974625-12974405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
91, 196
               

               
Conread position:
               
251-519
               

               
Cow position:
               
chr22:10585933-10585670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
93, 73
               

               
Conread position:
               
251-618
               

               
Cow position:
               
chr22:10314845-10315207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 84
               

               
Conread position:
               
251-671
               

               
Cow position:
               
chr22:10685320-10684911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 84
               

               
Conread position:
               
251-684
               

               
Cow position:
               
chr22:26166848-26166419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 59
               

               
Conread position:
               
253-435
               

               
Cow position:
               
chr22:15623088-15623275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
39, 178
               

               
Conread position:
               
257-618
               

               
Cow position:
               
chr22:43119955-43119598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
257-687
               

               
Cow position:
               
chr22:4372815-4373236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 134
               

               
Conread position:
               
257-696
               

               
Cow position:
               
chr22:1289745-1289318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 117
               

               
Conread position:
               
257-697
               

               
Cow position:
               
chr22:27825610-27826062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 55
               

               
Conread position:
               
259-478
               

               
Cow position:
               
chr22:66215-66422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
259-694
               

               
Cow position:
               
chr22:5616075-5616505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 188
               

               
Conread position:
               
265-404
               

               
Cow position:
               
chr22:17339981-17339844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
265-442
               

               
Cow position:
               
chr22:3944956-3945134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
79, 40
               

               
Conread position:
               
265-462
               

               
Cow position:
               
chr22:33918117-33917920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
79, 57
               

               
Conread position:
               
265-562
               

               
Cow position:
               
chr22:13849668-13849378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
82, 57
               

               
Conread position:
               
265-591
               

               
Cow position:
               
chr22:13300191-13300515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 151
               

               
Conread position:
               
265-641
               

               
Cow position:
               
chr22:15068207-15068580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
265-696
               

               
Cow position:
               
chr22:6149604-6149177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 147
               

               
Conread position:
               
266-600
               

               
Cow position:
               
chr22:10632698-10633027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 157
               

               
Conread position:
               
266-697
               

               
Cow position:
               
chr22:15153790-15154218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
104, 43
               

               
Conread position:
               
268-445
               

               
Cow position:
               
chr22:1727664-1727839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
268-582
               

               
Cow position:
               
chr22:5622934-5622622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
77, 53
               

               
Conread position:
               
269-687
               

               
Cow position:
               
chr22:3533734-3534134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
73, 14
               

               
Conread position:
               
271-445
               

               
Cow position:
               
chr22:10362842-10363031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
272-465
               

               
Cow position:
               
chr22:27512374-27512187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
92, 40
               

               
Conread position:
               
272-508
               

               
Cow position:
               
chr22:4974631-4974401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
272-596
               

               
Cow position:
               
chr22:43743541-43743237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
178, 72
               

               
Conread position:
               
273-571
               

               
Cow position:
               
chr22:10598187-10598469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
274-461
               

               
Cow position:
               
chr22:2945881-2945696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
61, 66
               

               
Conread position:
               
275-489
               

               
Cow position:
               
chr22:18219102-18218887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
36, 54
               

               
Conread position:
               
275-589
               

               
Cow position:
               
chr22:17125374-17125684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
69, 49
               

               
Conread position:
               
278-537
               

               
Cow position:
               
chr22:30710187-30710455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
62, 254
               

               
Conread position:
               
278-553
               

               
Cow position:
               
chr22:5675377-5675115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
217, 62
               

               
Conread position:
               
278-695
               

               
Cow position:
               
chr22:8429677-8430104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
57, 48
               

               
Conread position:
               
279-684
               

               
Cow position:
               
chr22:30998693-30999090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
280-588
               

               
Cow position:
               
chr22:3269682-3269387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 81
               

               
Conread position:
               
280-684
               

               
Cow position:
               
chr22:41898652-41898250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 46
               

               
Conread position:
               
280-696
               

               
Cow position:
               
chr22:23689410-23688991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
281-684
               

               
Cow position:
               
chr22:27274895-27274489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 45
               

               
Conread position:
               
282-608
               

               
Cow position:
               
chr22:27047601-27047293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
282-668
               

               
Cow position:
               
chr22:14378885-14378508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 113
               

               
Conread position:
               
284-604
               

               
Cow position:
               
chr22:2523763-2524080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 108
               

               
Conread position:
               
286-626
               

               
Cow position:
               
chr22:22907996-22908329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
286-687
               

               
Cow position:
               
chr22:46351583-46351191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
286-697
               

               
Cow position:
               
chr22:12313222-12313633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 142
               

               
Conread position:
               
287-618
               

               
Cow position:
               
chr22:21530547-21530228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
58, 35
               

               
Conread position:
               
287-637
               

               
Cow position:
               
chr22:16053116-16053456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
287-684
               

               
Cow position:
               
chr22:12315615-12316008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
288-600
               

               
Cow position:
               
chr22:23122221-23121889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
55, 177
               

               
Conread position:
               
288-641
               

               
Cow position:
               
chr22:15025299-15024958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 27
               

               
Conread position:
               
288-644
               

               
Cow position:
               
chr22:7252843-7252484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
56, 156
               

               
Conread position:
               
288-674
               

               
Cow position:
               
chr22:1848869-1849265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
290-676
               

               
Cow position:
               
chr22:12803578-12803196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 22
               

               
Conread position:
               
293-692
               

               
Cow position:
               
chr22:4583365-4583769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 164
               

               
Conread position:
               
294-626
               

               
Cow position:
               
chr22:33386697-33386371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
52, 96
               

               
Conread position:
               
295-693
               

               
Cow position:
               
chr22:1563442-1563032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 121
               

               
Conread position:
               
295-695
               

               
Cow position:
               
chr22:5837079-5837475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
295-697
               

               
Cow position:
               
chr22:36433158-36432760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 116
               

               
Conread position:
               
296-441
               

               
Cow position:
               
chr22:3541907-3541765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
297-695
               

               
Cow position:
               
chr22:16292107-16291722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
41, 93
               

               
Conread position:
               
300-683
               

               
Cow position:
               
chr22:16822921-16823316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
301-696
               

               
Cow position:
               
chr22:36761851-36762248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
303-543
               

               
Cow position:
               
chr22:15753186-15753440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
41, 161
               

               
Conread position:
               
304-685
               

               
Cow position:
               
chr22:12388908-12389303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 162
               

               
Conread position:
               
305-684
               

               
Cow position:
               
chr22:25764666-25764291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
34, 138
               

               
Conread position:
               
305-697
               

               
Cow position:
               
chr22:12800481-12800890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
39, 235
               

               
Conread position:
               
308-696
               

               
Cow position:
               
chr22:32698581-32698973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 127
               

               
Conread position:
               
311-697
               

               
Cow position:
               
chr22:6097199-6096803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
312-601
               

               
Cow position:
               
chr22:3367017-3367297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
32, 23
               

               
Conread position:
               
312-680
               

               
Cow position:
               
chr22:8090700-8090339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
312-694
               

               
Cow position:
               
chr22:26123502-26123100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
52, 136
               

               
Conread position:
               
312-697
               

               
Cow position:
               
chr22:45796168-45796556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
313-413
               

               
Cow position:
               
chr22:3543934-3544037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
313-592
               

               
Cow position:
               
chr22:9283772-9283494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
313-607
               

               
Cow position:
               
chr22:27740718-27741010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 140
               

               
Conread position:
               
315-604
               

               
Cow position:
               
chr22:14638652-14638359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
316-620
               

               
Cow position:
               
chr22:26969611-26969921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
28, 114
               

               
Conread position:
               
318-611
               

               
Cow position:
               
chr22:2912751-2912466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
24, 106
               

               
Conread position:
               
318-695
               

               
Cow position:
               
chr22:27729885-27730250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 81
               

               
Conread position:
               
319-499
               

               
Cow position:
               
chr22:11497025-11497214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 116
               

               
Conread position:
               
320-686
               

               
Cow position:
               
chr22:10416048-10416428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 141
               

               
Conread position:
               
320-694
               

               
Cow position:
               
chr22:31510535-31510152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 117
               

               
Conread position:
               
321-608
               

               
Cow position:
               
chr22:27835364-27835656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 109
               

               
Conread position:
               
323-601
               

               
Cow position:
               
chr22:24628814-24628544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
21, 120
               

               
Conread position:
               
324-617
               

               
Cow position:
               
chr22:19173536-19173832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 103
               

               
Conread position:
               
324-697
               

               
Cow position:
               
chr22:9668402-9668797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 105
               

               
Conread position:
               
325-680
               

               
Cow position:
               
chr22:30818049-30818405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 77
               

               
Conread position:
               
326-626
               

               
Cow position:
               
chr22:139465-139169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
14, 104
               

               
Conread position:
               
326-651
               

               
Cow position:
               
chr22:21393477-21393153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
326-685
               

               
Cow position:
               
chr22:40789411-40789757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 85
               

               
Conread position:
               
326-694
               

               
Cow position:
               
chr22:33399642-33399281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
327-680
               

               
Cow position:
               
chr22:43131708-43131358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 42
               

               
Conread position:
               
328-687
               

               
Cow position:
               
chr22:37030678-37030321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
328-697
               

               
Cow position:
               
chr22:15618455-15618822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
16, 133
               

               
Conread position:
               
329-619
               

               
Cow position:
               
chr22:7102674-7102964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
330-548
               

               
Cow position:
               
chr22:1874536-1874754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
14, 70
               

               
Conread position:
               
330-599
               

               
Cow position:
               
chr22:45845989-45846253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
13, 110
               

               
Conread position:
               
331-684
               

               
Cow position:
               
chr22:24915685-24916031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
149, 6
               

               
Conread position:
               
332-694
               

               
Cow position:
               
chr22:3566021-3566378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 110
               

               
Conread position:
               
337-673
               

               
Cow position:
               
chr22:21325881-21325547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 89
               

               
Conread position:
               
338-668
               

               
Cow position:
               
chr22:27066246-27066567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 144
               

               
Conread position:
               
340-676
               

               
Cow position:
               
chr22:898701-899030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
29, 50
               

               
Conread position:
               
341-439
               

               
Cow position:
               
chr22:14381258-14381357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
341-489
               

               
Cow position:
               
chr22:10292819-10292970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 123
               

               
Conread position:
               
341-507
               

               
Cow position:
               
chr22:26506867-26506703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
118, 40
               

               
Conread position:
               
341-669
               

               
Cow position:
               
chr22:27267397-27267739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
156, 115
               

               
Conread position:
               
341-676
               

               
Cow position:
               
chr22:22553378-22553055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
23, 80
               

               
Conread position:
               
341-680
               

               
Cow position:
               
chr22:11767193-11766852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
33, 100
               

               
Conread position:
               
341-680
               

               
Cow position:
               
chr22:15668617-15668286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
22, 124
               

               
Conread position:
               
341-695
               

               
Cow position:
               
chr22:42635574-42635220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
121, 51
               

               
Conread position:
               
342-542
               

               
Cow position:
               
chr22:45019978-45019789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
342-611
               

               
Cow position:
               
chr22:25539849-25540123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
342-636
               

               
Cow position:
               
chr22:17224806-17224523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
342-695
               

               
Cow position:
               
chr22:34735726-34736058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 58
               

               
Conread position:
               
343-620
               

               
Cow position:
               
chr22:31153815-31154090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 69
               

               
Conread position:
               
343-674
               

               
Cow position:
               
chr22:45807699-45808019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 96
               

               
Conread position:
               
343-684
               

               
Cow position:
               
chr22:34631996-34632351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
152, 68
               

               
Conread position:
               
346-697
               

               
Cow position:
               
chr22:27619592-27619951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
347-675
               

               
Cow position:
               
chr22:530714-530387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
42, 109
               

               
Conread position:
               
347-697
               

               
Cow position:
               
chr22:17193250-17193608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 80
               

               
Conread position:
               
347-697
               

               
Cow position:
               
chr22:27681578-27681936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
348-695
               

               
Cow position:
               
chr22:31599314-31599642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 35
               

               
Conread position:
               
350-592
               

               
Cow position:
               
chr22:10669608-10669369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
350-618
               

               
Cow position:
               
chr22:25387190-25387456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 38
               

               
Conread position:
               
351-676
               

               
Cow position:
               
chr22:19827998-19827669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
351-697
               

               
Cow position:
               
chr22:39602146-39602493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
352-697
               

               
Cow position:
               
chr22:2123162-2123506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
355-694
               

               
Cow position:
               
chr22:12929404-12929067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
9, 93
               

               
Conread position:
               
356-684
               

               
Cow position:
               
chr22:616993-617321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 91
               

               
Conread position:
               
362-596
               

               
Cow position:
               
chr22:12527247-12527013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
65, 93
               

               
Conread position:
               
362-633
               

               
Cow position:
               
chr22:10609232-10609502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
94, 85
               

               
Conread position:
               
363-537
               

               
Cow position:
               
chr22:45578843-45579017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
83, 94
               

               
Conread position:
               
363-584
               

               
Cow position:
               
chr22:4011063-4011281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
131, 74
               

               
Conread position:
               
363-602
               

               
Cow position:
               
chr22:12341074-12341311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 81
               

               
Conread position:
               
363-648
               

               
Cow position:
               
chr22:43237528-43237248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 99
               

               
Conread position:
               
363-684
               

               
Cow position:
               
chr22:27828263-27828578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
135, 77
               

               
Conread position:
               
364-618
               

               
Cow position:
               
chr22:6936145-6936385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
133, 28
               

               
Conread position:
               
364-694
               

               
Cow position:
               
chr22:19890840-19891174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
130, 75
               

               
Conread position:
               
366-595
               

               
Cow position:
               
chr22:13094280-13094500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
111, 63
               

               
Conread position:
               
366-697
               

               
Cow position:
               
chr22:15915160-15914830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
81, 88
               

               
Conread position:
               
367-694
               

               
Cow position:
               
chr22:38320795-38320498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
127, 71
               

               
Conread position:
               
368-617
               

               
Cow position:
               
chr22:13221995-13222247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
7, 80
               

               
Conread position:
               
368-676
               

               
Cow position:
               
chr22:12892482-12892169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
106, 32
               

               
Conread position:
               
368-696
               

               
Cow position:
               
chr22:12829727-12829397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
63, 82
               

               
Conread position:
               
369-686
               

               
Cow position:
               
chr22:6852698-6852377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
126, 75
               

               
Conread position:
               
369-689
               

               
Cow position:
               
chr22:13891454-13891780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
21, 32
               

               
Conread position:
               
370-692
               

               
Cow position:
               
chr22:1105949-1106281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
371-697
               

               
Cow position:
               
chr22:37947610-37947933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 82
               

               
Conread position:
               
375-617
               

               
Cow position:
               
chr22:1870992-1871226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
119, 39
               

               
Conread position:
               
375-684
               

               
Cow position:
               
chr22:39215725-39215412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
58, 50
               

               
Conread position:
               
375-692
               

               
Cow position:
               
chr22:23736120-23735804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
376-683
               

               
Cow position:
               
chr22:285467-285168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
216, 50
               

               
Conread position:
               
376-695
               

               
Cow position:
               
chr22:4135510-4135805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
119, 49
               

               
Conread position:
               
377-697
               

               
Cow position:
               
chr22:12830550-12830233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
118, 62
               

               
Conread position:
               
381-668
               

               
Cow position:
               
chr22:9597683-9597401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
119, 67
               

               
Conread position:
               
384-618
               

               
Cow position:
               
chr22:34104775-34104541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 64
               

               
Conread position:
               
384-619
               

               
Cow position:
               
chr22:26074822-26075053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
111, 41
               

               
Conread position:
               
384-641
               

               
Cow position:
               
chr22:8800556-8800301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
67, 133
               

               
Conread position:
               
386-617
               

               
Cow position:
               
chr22:10285867-10286100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
9, 69
               

               
Conread position:
               
388-684
               

               
Cow position:
               
chr22:24336432-24336744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
109, 7
               

               
Conread position:
               
388-697
               

               
Cow position:
               
chr22:2409216-2408916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
254, 35
               

               
Conread position:
               
389-697
               

               
Cow position:
               
chr22:1659067-1659380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
389-697
               

               
Cow position:
               
chr22:17652338-17652646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 64
               

               
Conread position:
               
390-694
               

               
Cow position:
               
chr22:27275370-27275676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
391-505
               

               
Cow position:
               
chr22:44262994-44263108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
392-587
               

               
Cow position:
               
chr22:18293853-18293665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
392-620
               

               
Cow position:
               
chr22:23750985-23750765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
133, 52
               

               
Conread position:
               
392-694
               

               
Cow position:
               
chr22:24903497-24903801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 49
               

               
Conread position:
               
392-697
               

               
Cow position:
               
chr22:7140550-7140860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
82, 48
               

               
Conread position:
               
393-696
               

               
Cow position:
               
chr22:34618705-34619023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
104, 63
               

               
Conread position:
               
394-641
               

               
Cow position:
               
chr22:4315538-4315785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 59
               

               
Conread position:
               
394-693
               

               
Cow position:
               
chr22:1983762-1984067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 47
               

               
Conread position:
               
396-615
               

               
Cow position:
               
chr22:29185696-29185480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
126, 70
               

               
Conread position:
               
396-620
               

               
Cow position:
               
chr22:26122809-26123031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
99, 52
               

               
Conread position:
               
396-662
               

               
Cow position:
               
chr22:18933808-18933533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
398-615
               

               
Cow position:
               
chr22:12749985-12749773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
398-684
               

               
Cow position:
               
chr22:12678506-12678221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
97, 50
               

               
Conread position:
               
398-686
               

               
Cow position:
               
chr22:16541738-16541446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
87, 43
               

               
Conread position:
               
399-626
               

               
Cow position:
               
chr22:10553770-10553542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
399-684
               

               
Cow position:
               
chr22:14214448-14214167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
98, 47
               

               
Conread position:
               
400-683
               

               
Cow position:
               
chr22:26056954-26056668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 137
               

               
Conread position:
               
402-620
               

               
Cow position:
               
chr22:26706890-26706674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 47
               

               
Conread position:
               
402-650
               

               
Cow position:
               
chr22:25846403-25846162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
93, 47
               

               
Conread position:
               
404-663
               

               
Cow position:
               
chr22:9171325-9171581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 131
               

               
Conread position:
               
404-676
               

               
Cow position:
               
chr22:23676045-23675781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 8
               

               
Conread position:
               
406-618
               

               
Cow position:
               
chr22:10533515-10533725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 106
               

               
Conread position:
               
407-667
               

               
Cow position:
               
chr22:1025810-1026086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
87, 37
               

               
Conread position:
               
407-684
               

               
Cow position:
               
chr22:42617921-42618195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 49
               

               
Conread position:
               
408-596
               

               
Cow position:
               
chr22:4137727-4137542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
90, 33
               

               
Conread position:
               
409-684
               

               
Cow position:
               
chr22:12981798-12981525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
88, 41
               

               
Conread position:
               
409-690
               

               
Cow position:
               
chr22:12157918-12157643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 18
               

               
Conread position:
               
410-684
               

               
Cow position:
               
chr22:35029191-35029459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
46, 126
               

               
Conread position:
               
413-684
               

               
Cow position:
               
chr22:1349752-1350027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
84, 211
               

               
Conread position:
               
414-680
               

               
Cow position:
               
chr22:22266240-22266518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
75, 27
               

               
Conread position:
               
416-593
               

               
Cow position:
               
chr22:28704116-28704290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
79, 32
               

               
Conread position:
               
416-681
               

               
Cow position:
               
chr22:6176358-6176085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 118
               

               
Conread position:
               
416-685
               

               
Cow position:
               
chr22:2109691-2109427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
416-697
               

               
Cow position:
               
chr22:21526851-21527123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
81, 42
               

               
Conread position:
               
421-689
               

               
Cow position:
               
chr22:4054649-4054398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 33
               

               
Conread position:
               
422-675
               

               
Cow position:
               
chr22:2076072-2075812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
423-613
               

               
Cow position:
               
chr22:21235495-21235310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
423-617
               

               
Cow position:
               
chr22:23440357-23440166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
427-684
               

               
Cow position:
               
chr22:5712529-5712784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
216, 29
               

               
Conread position:
               
428-682
               

               
Cow position:
               
chr22:2101003-2100751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
430-693
               

               
Cow position:
               
chr22:1500835-1501089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 29
               

               
Conread position:
               
432-694
               

               
Cow position:
               
chr22:15737180-15737437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
436-696
               

               
Cow position:
               
chr22:28672096-28672348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
438-652
               

               
Cow position:
               
chr22:34930825-34930614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 96
               

               
Conread position:
               
441-695
               

               
Cow position:
               
chr22:12902890-12902645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
444-618
               

               
Cow position:
               
chr22:6326399-6326575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
10, 94
               

               
Conread position:
               
444-647
               

               
Cow position:
               
chr22:30253156-30253374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
16, 92
               

               
Conread position:
               
444-677
               

               
Cow position:
               
chr22:14676644-14676881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
449-613
               

               
Cow position:
               
chr22:23398441-23398278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 5
               

               
Conread position:
               
450-684
               

               
Cow position:
               
chr22:12188517-12188274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 32
               

               
Conread position:
               
450-684
               

               
Cow position:
               
chr22:12195604-12195360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 32
               

               
Conread position:
               
450-695
               

               
Cow position:
               
chr22:45772061-45771814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
452-694
               

               
Cow position:
               
chr22:11352487-11352236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
43, 83
               

               
Conread position:
               
453-681
               

               
Cow position:
               
chr22:1776025-1776260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
48, 82
               

               
Conread position:
               
454-604
               

               
Cow position:
               
chr22:4149388-4149536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
5, 45
               

               
Conread position:
               
454-615
               

               
Cow position:
               
chr22:28120687-28120852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 85
               

               
Conread position:
               
454-616
               

               
Cow position:
               
chr22:1838275-1838438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
454-694
               

               
Cow position:
               
chr22:26803782-26804032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
455-641
               

               
Cow position:
               
chr22:17119786-17119965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
455-641
               

               
Cow position:
               
chr22:32514259-32514447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 82
               

               
Conread position:
               
455-680
               

               
Cow position:
               
chr22:7832386-7832153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
455-684
               

               
Cow position:
               
chr22:4310403-4310169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
122, 56
               

               
Conread position:
               
455-684
               

               
Cow position:
               
chr22:7362009-7361775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
455-697
               

               
Cow position:
               
chr22:33985832-33985594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 68
               

               
Conread position:
               
456-613
               

               
Cow position:
               
chr22:36192437-36192591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
456-618
               

               
Cow position:
               
chr22:23036133-23036296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
456-680
               

               
Cow position:
               
chr22:4657074-4656850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
456-684
               

               
Cow position:
               
chr22:4156848-4156615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
456-684
               

               
Cow position:
               
chr22:8357553-8357778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
39, 81
               

               
Conread position:
               
456-685
               

               
Cow position:
               
chr22:17198107-17198339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
39, 80
               

               
Conread position:
               
456-691
               

               
Cow position:
               
chr22:3470256-3470497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 165
               

               
Conread position:
               
456-697
               

               
Cow position:
               
chr22:23372895-23372647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
457-681
               

               
Cow position:
               
chr22:38115163-38115380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
457-686
               

               
Cow position:
               
chr22:10557249-10557474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
457-693
               

               
Cow position:
               
chr22:243083-243311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
457-694
               

               
Cow position:
               
chr22:47562673-47562921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
457-697
               

               
Cow position:
               
chr22:24063060-24063318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
39, 82
               

               
Conread position:
               
458-607
               

               
Cow position:
               
chr22:14381630-14381779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
458-618
               

               
Cow position:
               
chr22:1977720-1977880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
458-676
               

               
Cow position:
               
chr22:14141371-14141149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
39, 78
               

               
Conread position:
               
458-679
               

               
Cow position:
               
chr22:18967187-18966966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
183, 38
               

               
Conread position:
               
458-697
               

               
Cow position:
               
chr22:35215519-35215762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 78
               

               
Conread position:
               
459-675
               

               
Cow position:
               
chr22:4163951-4164170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
39, 49
               

               
Conread position:
               
459-679
               

               
Cow position:
               
chr22:39446264-39446489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
185, 76
               

               
Conread position:
               
459-684
               

               
Cow position:
               
chr22:23265680-23265447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 76
               

               
Conread position:
               
460-618
               

               
Cow position:
               
chr22:12974195-12974039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 59
               

               
Conread position:
               
461-694
               

               
Cow position:
               
chr22:8710398-8710172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
461-697
               

               
Cow position:
               
chr22:24134349-24134110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 62
               

               
Conread position:
               
462-697
               

               
Cow position:
               
chr22:26112341-26112577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
463-694
               

               
Cow position:
               
chr22:26233609-26233845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
464-693
               

               
Cow position:
               
chr22:21905449-21905678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
467-668
               

               
Cow position:
               
chr22:2643910-2644117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
136, 29
               

               
Conread position:
               
467-684
               

               
Cow position:
               
chr22:12996828-12996609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
467-692
               

               
Cow position:
               
chr22:1714885-1714655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
467-697
               

               
Cow position:
               
chr22:19414057-19413824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 68
               

               
Conread position:
               
468-684
               

               
Cow position:
               
chr22:23277336-23277538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
471-680
               

               
Cow position:
               
chr22:4736007-4736222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 64
               

               
Conread position:
               
473-680
               

               
Cow position:
               
chr22:1065091-1065303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
22, 57
               

               
Conread position:
               
473-684
               

               
Cow position:
               
chr22:7584250-7584043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
24, 50
               

               
Conread position:
               
473-687
               

               
Cow position:
               
chr22:16813784-16813998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
24, 62
               

               
Conread position:
               
473-695
               

               
Cow position:
               
chr22:26267836-26268061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
169, 17
               

               
Conread position:
               
473-697
               

               
Cow position:
               
chr22:14487921-14488153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
474-679
               

               
Cow position:
               
chr22:11189019-11189225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
475-591
               

               
Cow position:
               
chr22:11389600-11389485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
476-696
               

               
Cow position:
               
chr22:1821596-1821379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
476-697
               

               
Cow position:
               
chr22:45104280-45104051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
116, 20
               

               
Conread position:
               
477-679
               

               
Cow position:
               
chr22:24071657-24071462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
20, 46
               

               
Conread position:
               
478-627
               

               
Cow position:
               
chr22:22606216-22606364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
481-679
               

               
Cow position:
               
chr22:4628547-4628757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
481-686
               

               
Cow position:
               
chr22:8327740-8327943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
482-676
               

               
Cow position:
               
chr22:1523213-1523414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
482-678
               

               
Cow position:
               
chr22:6360189-6359999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
485-686
               

               
Cow position:
               
chr22:45684040-45683833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
125, 49
               

               
Conread position:
               
487-681
               

               
Cow position:
               
chr22:26188870-26189069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
488-591
               

               
Cow position:
               
chr22:28649718-28649615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
489-695
               

               
Cow position:
               
chr22:3541115-3540910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
153, 45
               

               
Conread position:
               
491-696
               

               
Cow position:
               
chr22:33030802-33031018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
7, 44
               

               
Conread position:
               
491-697
               

               
Cow position:
               
chr22:33373245-33373456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
93, 10
               

               
Conread position:
               
493-616
               

               
Cow position:
               
chr22:14482526-14482403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
111, 41
               

               
Conread position:
               
493-671
               

               
Cow position:
               
chr22:18145545-18145722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
148, 8
               

               
Conread position:
               
493-681
               

               
Cow position:
               
chr22:2436611-2436426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 42
               

               
Conread position:
               
493-682
               

               
Cow position:
               
chr22:2184705-2184518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
150, 42
               

               
Conread position:
               
493-695
               

               
Cow position:
               
chr22:39472151-39471941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
493-696
               

               
Cow position:
               
chr22:27580406-27580213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
150, 33
               

               
Conread position:
               
496-641
               

               
Cow position:
               
chr22:7512625-7512770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
496-671
               

               
Cow position:
               
chr22:29134968-29135142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
145, 38
               

               
Conread position:
               
496-673
               

               
Cow position:
               
chr22:8331008-8331189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
146, 38
               

               
Conread position:
               
496-676
               

               
Cow position:
               
chr22:44684497-44684667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
162, 38
               

               
Conread position:
               
496-695
               

               
Cow position:
               
chr22:23288047-23287857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
496-695
               

               
Cow position:
               
chr22:45788620-45788819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
139, 38
               

               
Conread position:
               
496-696
               

               
Cow position:
               
chr22:35533222-35533014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
115, 23
               

               
Conread position:
               
497-615
               

               
Cow position:
               
chr22:5411854-5411973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
497-648
               

               
Cow position:
               
chr22:20166852-20166703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
91, 37
               

               
Conread position:
               
498-618
               

               
Cow position:
               
chr22:3997767-3997884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
498-687
               

               
Cow position:
               
chr22:1304542-1304352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
498-695
               

               
Cow position:
               
chr22:23630339-23630143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
145, 36
               

               
Conread position:
               
498-697
               

               
Cow position:
               
chr22:22433054-22433262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 36
               

               
Conread position:
               
499-618
               

               
Cow position:
               
chr22:31308897-31309015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
499-668
               

               
Cow position:
               
chr22:755833-755669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
141, 11
               

               
Conread position:
               
499-672
               

               
Cow position:
               
chr22:2516894-2516724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
123, 35
               

               
Conread position:
               
499-680
               

               
Cow position:
               
chr22:24890233-24890416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
8, 36
               

               
Conread position:
               
499-684
               

               
Cow position:
               
chr22:2704311-2704501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
143, 36
               

               
Conread position:
               
499-691
               

               
Cow position:
               
chr22:38815186-38814995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
144, 35
               

               
Conread position:
               
499-694
               

               
Cow position:
               
chr22:14641844-14641645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 35
               

               
Conread position:
               
499-694
               

               
Cow position:
               
chr22:16339868-16340067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
143, 35
               

               
Conread position:
               
499-697
               

               
Cow position:
               
chr22:7518568-7518765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
145, 35
               

               
Conread position:
               
499-697
               

               
Cow position:
               
chr22:12777364-12777169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
159, 35
               

               
Conread position:
               
499-697
               

               
Cow position:
               
chr22:16916916-16916718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
144, 10
               

               
Conread position:
               
500-680
               

               
Cow position:
               
chr22:27591208-27591397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
106, 34
               

               
Conread position:
               
500-690
               

               
Cow position:
               
chr22:37140419-37140603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
500-695
               

               
Cow position:
               
chr22:1991613-1991811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 34
               

               
Conread position:
               
500-697
               

               
Cow position:
               
chr22:30615744-30615944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
143, 34
               

               
Conread position:
               
501-683
               

               
Cow position:
               
chr22:1384097-1384272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
157, 33
               

               
Conread position:
               
501-693
               

               
Cow position:
               
chr22:13951278-13951471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
115, 33
               

               
Conread position:
               
501-696
               

               
Cow position:
               
chr22:16129152-16129355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
133, 33
               

               
Conread position:
               
502-693
               

               
Cow position:
               
chr22:9735285-9735474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
141, 33
               

               
Conread position:
               
503-668
               

               
Cow position:
               
chr22:1819519-1819347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
503-681
               

               
Cow position:
               
chr22:20472345-20472176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
155, 30
               

               
Conread position:
               
503-697
               

               
Cow position:
               
chr22:25312526-25312729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
140, 31
               

               
Conread position:
               
504-618
               

               
Cow position:
               
chr22:6138480-6138364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
504-618
               

               
Cow position:
               
chr22:41682410-41682297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
504-668
               

               
Cow position:
               
chr22:10585566-10585412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
154, 30
               

               
Conread position:
               
509-681
               

               
Cow position:
               
chr22:2201763-2201931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
509-696
               

               
Cow position:
               
chr22:19376693-19376887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
85, 25
               

               
Conread position:
               
509-697
               

               
Cow position:
               
chr22:23801545-23801360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
510-611
               

               
Cow position:
               
chr22:531455-531355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
510-647
               

               
Cow position:
               
chr22:16655714-16655581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
133, 24
               

               
Conread position:
               
510-671
               

               
Cow position:
               
chr22:15007087-15006925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 24
               

               
Conread position:
               
510-680
               

               
Cow position:
               
chr22:12741248-12741086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
148, 24
               

               
Conread position:
               
511-680
               

               
Cow position:
               
chr22:9325862-9326037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
512-696
               

               
Cow position:
               
chr22:1320520-1320698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
512-697
               

               
Cow position:
               
chr22:1046166-1045973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
87, 22
               

               
Conread position:
               
513-618
               

               
Cow position:
               
chr22:14816081-14815976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 21
               

               
Conread position:
               
513-680
               

               
Cow position:
               
chr22:35627375-35627546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
126, 21
               

               
Conread position:
               
513-681
               

               
Cow position:
               
chr22:1074291-1074464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
129, 21
               

               
Conread position:
               
513-681
               

               
Cow position:
               
chr22:21042119-21041958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
513-693
               

               
Cow position:
               
chr22:3257634-3257459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
128, 6
               

               
Conread position:
               
513-696
               

               
Cow position:
               
chr22:24047584-24047410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
513-697
               

               
Cow position:
               
chr22:5673838-5674016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
145, 11
               

               
Conread position:
               
513-697
               

               
Cow position:
               
chr22:5779056-5778867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
513-697
               

               
Cow position:
               
chr22:30684756-30684937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
130, 8
               

               
Conread position:
               
514-682
               

               
Cow position:
               
chr22:23762823-23762654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
115, 20
               

               
Conread position:
               
515-620
               

               
Cow position:
               
chr22:13326923-13327027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
515-680
               

               
Cow position:
               
chr22:1105595-1105432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
128, 19
               

               
Conread position:
               
515-683
               

               
Cow position:
               
chr22:21483969-21484130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
515-686
               

               
Cow position:
               
chr22:4751115-4750936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
515-695
               

               
Cow position:
               
chr22:10594637-10594822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
128, 20
               

               
Conread position:
               
518-697
               

               
Cow position:
               
chr22:30176749-30176935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
125, 16
               

               
Conread position:
               
519-680
               

               
Cow position:
               
chr22:8480136-8480305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
92, 15
               

               
Conread position:
               
519-694
               

               
Cow position:
               
chr22:33566061-33565885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
124, 15
               

               
Conread position:
               
519-695
               

               
Cow position:
               
chr22:37702011-37702185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
125, 16
               

               
Conread position:
               
520-696
               

               
Cow position:
               
chr22:9075441-9075619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
123, 14
               

               
Conread position:
               
522-697
               

               
Cow position:
               
chr22:11790019-11790199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
121, 13
               

               
Conread position:
               
522-697
               

               
Cow position:
               
chr22:30583690-30583872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
529-675
               

               
Cow position:
               
chr22:21499804-21499653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
533-671
               

               
Cow position:
               
chr22:39908043-39907908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
125, 97
               

               
Conread position:
               
533-697
               

               
Cow position:
               
chr22:32617764-32617923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
109, 79
               

               
Conread position:
               
535-680
               

               
Cow position:
               
chr22:12207658-12207512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
108, 82
               

               
Conread position:
               
535-694
               

               
Cow position:
               
chr22:40371420-40371574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
152, 31
               

               
Conread position:
               
538-695
               

               
Cow position:
               
chr22:7074955-7075110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
105, 75
               

               
Conread position:
               
545-693
               

               
Cow position:
               
chr22:29546697-29546846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
547-680
               

               
Cow position:
               
chr22:26775560-26775700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
559-695
               

               
Cow position:
               
chr22:21963888-21964034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               
Show alignments to all cow chromosomes.