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Cow genome map

           
Conread name:
           
Pig3-SRG8015N22
        

               
Conread position:
               
93-421
               

               
Cow position:
               
chr24:3626887-3627210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
69, 116
               

               
Conread position:
               
131-618
               

               
Cow position:
               
chr24:18390652-18390191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 6
               

               
Conread position:
               
148-694
               

               
Cow position:
               
chr24:36404502-36403966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 65
               

               
Conread position:
               
149-617
               

               
Cow position:
               
chr24:43200628-43200167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
154-589
               

               
Cow position:
               
chr24:23824772-23824341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
162-611
               

               
Cow position:
               
chr24:43683797-43683360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
165-432
               

               
Cow position:
               
chr24:14729067-14729326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
45, 85
               

               
Conread position:
               
174-600
               

               
Cow position:
               
chr24:18974871-18975301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
172, 73
               

               
Conread position:
               
178-432
               

               
Cow position:
               
chr24:2730895-2730641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 5
               

               
Conread position:
               
178-573
               

               
Cow position:
               
chr24:30545172-30544800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 6
               

               
Conread position:
               
179-696
               

               
Cow position:
               
chr24:23695223-23694720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
180-629
               

               
Cow position:
               
chr24:16268427-16268005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 66
               

               
Conread position:
               
184-661
               

               
Cow position:
               
chr24:6102515-6102983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
184-694
               

               
Cow position:
               
chr24:39350524-39350032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 25
               

               
Conread position:
               
185-445
               

               
Cow position:
               
chr24:40184302-40184565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 87
               

               
Conread position:
               
185-684
               

               
Cow position:
               
chr24:27608421-27607932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 131
               

               
Conread position:
               
186-487
               

               
Cow position:
               
chr24:21860540-21860243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
195-479
               

               
Cow position:
               
chr24:22433321-22433609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
57, 183
               

               
Conread position:
               
197-517
               

               
Cow position:
               
chr24:35795047-35794725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 214
               

               
Conread position:
               
202-680
               

               
Cow position:
               
chr24:15057101-15057559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 34
               

               
Conread position:
               
202-696
               

               
Cow position:
               
chr24:27726305-27725816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
205-462
               

               
Cow position:
               
chr24:18075850-18076101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
138, 180
               

               
Conread position:
               
205-670
               

               
Cow position:
               
chr24:40129826-40130301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 42
               

               
Conread position:
               
207-618
               

               
Cow position:
               
chr24:16556928-16556536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 33
               

               
Conread position:
               
208-597
               

               
Cow position:
               
chr24:28319498-28319120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 106
               

               
Conread position:
               
208-597
               

               
Cow position:
               
chr24:29388954-29389323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 32
               

               
Conread position:
               
211-608
               

               
Cow position:
               
chr24:43927611-43927233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
211-623
               

               
Cow position:
               
chr24:14648628-14648244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
29, 37
               

               
Conread position:
               
211-641
               

               
Cow position:
               
chr24:25320696-25321115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 233
               

               
Conread position:
               
211-684
               

               
Cow position:
               
chr24:34761601-34762075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
211-697
               

               
Cow position:
               
chr24:5141648-5142130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 35
               

               
Conread position:
               
212-444
               

               
Cow position:
               
chr24:18324322-18324561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
212-445
               

               
Cow position:
               
chr24:27720044-27719815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
132, 35
               

               
Conread position:
               
212-697
               

               
Cow position:
               
chr24:42345300-42344804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 18
               

               
Conread position:
               
213-456
               

               
Cow position:
               
chr24:591617-591866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
13, 114
               

               
Conread position:
               
214-390
               

               
Cow position:
               
chr24:19804397-19804576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
214-417
               

               
Cow position:
               
chr24:6340727-6340928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
155, 103
               

               
Conread position:
               
214-425
               

               
Cow position:
               
chr24:6436502-6436715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
52, 43
               

               
Conread position:
               
214-432
               

               
Cow position:
               
chr24:12293734-12293956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
42, 65
               

               
Conread position:
               
214-432
               

               
Cow position:
               
chr24:32854248-32854472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
214-434
               

               
Cow position:
               
chr24:35405861-35405636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
214-436
               

               
Cow position:
               
chr24:6900535-6900758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
135, 12
               

               
Conread position:
               
214-436
               

               
Cow position:
               
chr24:14279597-14279824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 216
               

               
Conread position:
               
214-436
               

               
Cow position:
               
chr24:40908726-40908953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
135, 83
               

               
Conread position:
               
214-438
               

               
Cow position:
               
chr24:3631227-3631442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
214-438
               

               
Cow position:
               
chr24:7301166-7301394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
109, 33
               

               
Conread position:
               
214-443
               

               
Cow position:
               
chr24:18266462-18266226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
214-443
               

               
Cow position:
               
chr24:20970082-20969861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
214-445
               

               
Cow position:
               
chr24:14124800-14125036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
52, 172
               

               
Conread position:
               
214-459
               

               
Cow position:
               
chr24:38347389-38347639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 113
               

               
Conread position:
               
214-478
               

               
Cow position:
               
chr24:39493006-39493267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
31, 125
               

               
Conread position:
               
214-482
               

               
Cow position:
               
chr24:6914054-6913789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
128, 82
               

               
Conread position:
               
214-483
               

               
Cow position:
               
chr24:35572197-35572459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
126, 19
               

               
Conread position:
               
214-505
               

               
Cow position:
               
chr24:42007456-42007738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 33
               

               
Conread position:
               
214-506
               

               
Cow position:
               
chr24:34315068-34315355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
152, 32
               

               
Conread position:
               
214-512
               

               
Cow position:
               
chr24:6160374-6160084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
129, 64
               

               
Conread position:
               
214-514
               

               
Cow position:
               
chr24:3214461-3214762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
214-515
               

               
Cow position:
               
chr24:634700-634985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
283, 32
               

               
Conread position:
               
214-520
               

               
Cow position:
               
chr24:27052782-27052481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 29
               

               
Conread position:
               
214-530
               

               
Cow position:
               
chr24:21768352-21768667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
136, 229
               

               
Conread position:
               
214-543
               

               
Cow position:
               
chr24:20024317-20024648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 233
               

               
Conread position:
               
214-559
               

               
Cow position:
               
chr24:27341314-27340968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 180
               

               
Conread position:
               
214-559
               

               
Cow position:
               
chr24:44808955-44809301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
214-588
               

               
Cow position:
               
chr24:8886626-8886990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 97
               

               
Conread position:
               
214-596
               

               
Cow position:
               
chr24:45004665-45005037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 24
               

               
Conread position:
               
214-604
               

               
Cow position:
               
chr24:29063936-29063563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 119
               

               
Conread position:
               
214-606
               

               
Cow position:
               
chr24:33230376-33230772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
214-610
               

               
Cow position:
               
chr24:814555-814168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 108
               

               
Conread position:
               
214-615
               

               
Cow position:
               
chr24:29679602-29679204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
214-616
               

               
Cow position:
               
chr24:31159338-31159723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 96
               

               
Conread position:
               
214-617
               

               
Cow position:
               
chr24:33153492-33153886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 98
               

               
Conread position:
               
214-618
               

               
Cow position:
               
chr24:201923-201526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 43
               

               
Conread position:
               
214-633
               

               
Cow position:
               
chr24:12851444-12851834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
377, 12
               

               
Conread position:
               
214-664
               

               
Cow position:
               
chr24:44041300-44040852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 113
               

               
Conread position:
               
214-666
               

               
Cow position:
               
chr24:31816295-31816736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 139
               

               
Conread position:
               
214-675
               

               
Cow position:
               
chr24:17860541-17860092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 103
               

               
Conread position:
               
214-678
               

               
Cow position:
               
chr24:39483186-39483636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 21
               

               
Conread position:
               
214-679
               

               
Cow position:
               
chr24:18734650-18734206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 69
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr24:27874312-27874748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 120
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr24:28496878-28496408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr24:32693412-32693895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 157
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr24:34272512-34272994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 92
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr24:35332429-35332903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
214-681
               

               
Cow position:
               
chr24:211691-212146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 228
               

               
Conread position:
               
214-682
               

               
Cow position:
               
chr24:15246926-15246481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 109
               

               
Conread position:
               
214-682
               

               
Cow position:
               
chr24:27844810-27844356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 122
               

               
Conread position:
               
214-683
               

               
Cow position:
               
chr24:17311499-17311051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 122
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr24:3165531-3165998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 108
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr24:31811895-31812364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 33
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr24:33621776-33621297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 174
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr24:42103086-42103540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 19
               

               
Conread position:
               
214-685
               

               
Cow position:
               
chr24:3493603-3494061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 51
               

               
Conread position:
               
214-685
               

               
Cow position:
               
chr24:17104857-17104392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 107
               

               
Conread position:
               
214-686
               

               
Cow position:
               
chr24:44987664-44987192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 87
               

               
Conread position:
               
214-687
               

               
Cow position:
               
chr24:20225447-20225925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 214
               

               
Conread position:
               
214-694
               

               
Cow position:
               
chr24:19535534-19535060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 43
               

               
Conread position:
               
214-696
               

               
Cow position:
               
chr24:13625999-13626478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
214-696
               

               
Cow position:
               
chr24:19466223-19465716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 56
               

               
Conread position:
               
214-696
               

               
Cow position:
               
chr24:29180611-29181086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 33
               

               
Conread position:
               
214-697
               

               
Cow position:
               
chr24:6149740-6150182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 51
               

               
Conread position:
               
214-697
               

               
Cow position:
               
chr24:18485290-18484800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 321
               

               
Conread position:
               
214-697
               

               
Cow position:
               
chr24:28303638-28303170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 39
               

               
Conread position:
               
214-697
               

               
Cow position:
               
chr24:32054381-32054836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 125
               

               
Conread position:
               
215-434
               

               
Cow position:
               
chr24:11006927-11007149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 11
               

               
Conread position:
               
215-434
               

               
Cow position:
               
chr24:38374996-38375214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
129, 42
               

               
Conread position:
               
215-434
               

               
Cow position:
               
chr24:41333165-41332949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
215-442
               

               
Cow position:
               
chr24:27543765-27543540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 125
               

               
Conread position:
               
215-442
               

               
Cow position:
               
chr24:27809892-27810124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
215-442
               

               
Cow position:
               
chr24:30695980-30695767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
215-446
               

               
Cow position:
               
chr24:20862245-20862016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
165, 35
               

               
Conread position:
               
215-458
               

               
Cow position:
               
chr24:6341880-6342134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
36, 242
               

               
Conread position:
               
215-462
               

               
Cow position:
               
chr24:43733680-43733928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
128, 107
               

               
Conread position:
               
215-463
               

               
Cow position:
               
chr24:27270505-27270738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
163, 72
               

               
Conread position:
               
215-489
               

               
Cow position:
               
chr24:11876592-11876869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 115
               

               
Conread position:
               
215-503
               

               
Cow position:
               
chr24:36555117-36554837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 35
               

               
Conread position:
               
215-506
               

               
Cow position:
               
chr24:18405593-18405312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
127, 32
               

               
Conread position:
               
215-506
               

               
Cow position:
               
chr24:39219135-39218841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 32
               

               
Conread position:
               
215-508
               

               
Cow position:
               
chr24:16625790-16625485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
150, 121
               

               
Conread position:
               
215-595
               

               
Cow position:
               
chr24:29170676-29171048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 130
               

               
Conread position:
               
215-596
               

               
Cow position:
               
chr24:32370200-32369827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 98
               

               
Conread position:
               
215-606
               

               
Cow position:
               
chr24:39905747-39905349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
125, 26
               

               
Conread position:
               
215-606
               

               
Cow position:
               
chr24:43432513-43432888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 32
               

               
Conread position:
               
215-611
               

               
Cow position:
               
chr24:18331447-18331823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
215-616
               

               
Cow position:
               
chr24:25677745-25678133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
130, 81
               

               
Conread position:
               
215-641
               

               
Cow position:
               
chr24:29781873-29782294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 32
               

               
Conread position:
               
215-668
               

               
Cow position:
               
chr24:18741860-18741402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 108
               

               
Conread position:
               
215-676
               

               
Cow position:
               
chr24:28553833-28553401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 32
               

               
Conread position:
               
215-680
               

               
Cow position:
               
chr24:28690411-28690861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 96
               

               
Conread position:
               
215-684
               

               
Cow position:
               
chr24:1269515-1269956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 109
               

               
Conread position:
               
215-684
               

               
Cow position:
               
chr24:18732412-18731929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 84
               

               
Conread position:
               
215-693
               

               
Cow position:
               
chr24:33944118-33944594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 88
               

               
Conread position:
               
215-694
               

               
Cow position:
               
chr24:28721599-28722065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 55
               

               
Conread position:
               
215-695
               

               
Cow position:
               
chr24:40300866-40301351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 106
               

               
Conread position:
               
215-697
               

               
Cow position:
               
chr24:41985687-41986166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 32
               

               
Conread position:
               
216-432
               

               
Cow position:
               
chr24:35793891-35794113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 41
               

               
Conread position:
               
216-445
               

               
Cow position:
               
chr24:34564840-34565064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 25
               

               
Conread position:
               
216-524
               

               
Cow position:
               
chr24:7917655-7917344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
216-604
               

               
Cow position:
               
chr24:30177948-30178354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 95
               

               
Conread position:
               
216-613
               

               
Cow position:
               
chr24:5754553-5754940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 83
               

               
Conread position:
               
216-618
               

               
Cow position:
               
chr24:44054430-44054059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
381, 96
               

               
Conread position:
               
216-620
               

               
Cow position:
               
chr24:18970780-18970397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 78
               

               
Conread position:
               
216-649
               

               
Cow position:
               
chr24:29673231-29673668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 124
               

               
Conread position:
               
216-679
               

               
Cow position:
               
chr24:39850165-39849718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 42
               

               
Conread position:
               
216-694
               

               
Cow position:
               
chr24:32609350-32609839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 233
               

               
Conread position:
               
217-571
               

               
Cow position:
               
chr24:17412450-17412789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
82, 26
               

               
Conread position:
               
217-595
               

               
Cow position:
               
chr24:43364076-43364445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 103
               

               
Conread position:
               
218-609
               

               
Cow position:
               
chr24:11118994-11119378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 95
               

               
Conread position:
               
218-618
               

               
Cow position:
               
chr24:27290591-27290981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 25
               

               
Conread position:
               
218-669
               

               
Cow position:
               
chr24:35073806-35074246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 114
               

               
Conread position:
               
218-696
               

               
Cow position:
               
chr24:34532837-34533330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 211
               

               
Conread position:
               
219-418
               

               
Cow position:
               
chr24:28600893-28600701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
71, 66
               

               
Conread position:
               
219-498
               

               
Cow position:
               
chr24:29027764-29028032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 28
               

               
Conread position:
               
221-610
               

               
Cow position:
               
chr24:27748371-27748743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 26
               

               
Conread position:
               
222-462
               

               
Cow position:
               
chr24:39681573-39681810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
122, 100
               

               
Conread position:
               
223-445
               

               
Cow position:
               
chr24:13626974-13626742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
223-605
               

               
Cow position:
               
chr24:24250451-24250819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
223-686
               

               
Cow position:
               
chr24:11839898-11840366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 23
               

               
Conread position:
               
224-591
               

               
Cow position:
               
chr24:41755586-41755945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 16
               

               
Conread position:
               
224-693
               

               
Cow position:
               
chr24:30314316-30313839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 209
               

               
Conread position:
               
225-412
               

               
Cow position:
               
chr24:250848-250661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
80, 29
               

               
Conread position:
               
225-442
               

               
Cow position:
               
chr24:27465851-27465642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
19, 86
               

               
Conread position:
               
225-445
               

               
Cow position:
               
chr24:33255954-33256163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
141, 60
               

               
Conread position:
               
225-483
               

               
Cow position:
               
chr24:17567111-17567360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
119, 78
               

               
Conread position:
               
225-492
               

               
Cow position:
               
chr24:27941287-27941029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
225-494
               

               
Cow position:
               
chr24:24137130-24136875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
225-506
               

               
Cow position:
               
chr24:43635156-43635437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
225-520
               

               
Cow position:
               
chr24:5849687-5849378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
26, 155
               

               
Conread position:
               
225-548
               

               
Cow position:
               
chr24:23685340-23685026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
119, 97
               

               
Conread position:
               
225-585
               

               
Cow position:
               
chr24:7001348-7000987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 180
               

               
Conread position:
               
225-588
               

               
Cow position:
               
chr24:3430456-3430813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
225-625
               

               
Cow position:
               
chr24:35150251-35150638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 22
               

               
Conread position:
               
225-629
               

               
Cow position:
               
chr24:14746358-14746768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
205, 22
               

               
Conread position:
               
225-630
               

               
Cow position:
               
chr24:2108531-2108122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
106, 99
               

               
Conread position:
               
225-641
               

               
Cow position:
               
chr24:39440837-39440435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 88
               

               
Conread position:
               
225-647
               

               
Cow position:
               
chr24:20874397-20874817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 222
               

               
Conread position:
               
225-648
               

               
Cow position:
               
chr24:20942898-20943298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
418, 32
               

               
Conread position:
               
225-663
               

               
Cow position:
               
chr24:40849885-40850306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
155, 29
               

               
Conread position:
               
225-669
               

               
Cow position:
               
chr24:43028605-43028164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 148
               

               
Conread position:
               
225-676
               

               
Cow position:
               
chr24:29596090-29595629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
225-676
               

               
Cow position:
               
chr24:37650391-37650846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 87
               

               
Conread position:
               
225-678
               

               
Cow position:
               
chr24:25885437-25884975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 78
               

               
Conread position:
               
225-680
               

               
Cow position:
               
chr24:33098767-33098297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 92
               

               
Conread position:
               
225-680
               

               
Cow position:
               
chr24:35675264-35675706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 202
               

               
Conread position:
               
225-681
               

               
Cow position:
               
chr24:24491293-24490850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 86
               

               
Conread position:
               
225-683
               

               
Cow position:
               
chr24:34742470-34742927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 52
               

               
Conread position:
               
225-684
               

               
Cow position:
               
chr24:2402653-2402198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
225-684
               

               
Cow position:
               
chr24:7913719-7914189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 204
               

               
Conread position:
               
225-692
               

               
Cow position:
               
chr24:10671105-10671585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 209
               

               
Conread position:
               
225-697
               

               
Cow position:
               
chr24:30235599-30236064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 37
               

               
Conread position:
               
226-434
               

               
Cow position:
               
chr24:37246496-37246282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
118, 200
               

               
Conread position:
               
226-461
               

               
Cow position:
               
chr24:35568911-35569140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
172, 21
               

               
Conread position:
               
226-684
               

               
Cow position:
               
chr24:2675053-2675515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 31
               

               
Conread position:
               
226-695
               

               
Cow position:
               
chr24:40592443-40592902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
148, 31
               

               
Conread position:
               
227-464
               

               
Cow position:
               
chr24:30860360-30860595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
143, 34
               

               
Conread position:
               
227-484
               

               
Cow position:
               
chr24:27967803-27968060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 108
               

               
Conread position:
               
227-596
               

               
Cow position:
               
chr24:40091852-40091492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 111
               

               
Conread position:
               
227-635
               

               
Cow position:
               
chr24:17294464-17294071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 95
               

               
Conread position:
               
227-641
               

               
Cow position:
               
chr24:18025248-18024839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 20
               

               
Conread position:
               
227-690
               

               
Cow position:
               
chr24:28062668-28063135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 204
               

               
Conread position:
               
228-505
               

               
Cow position:
               
chr24:16267516-16267770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
269, 78
               

               
Conread position:
               
228-618
               

               
Cow position:
               
chr24:19769222-19769605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 81
               

               
Conread position:
               
229-474
               

               
Cow position:
               
chr24:25229332-25229085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
115, 18
               

               
Conread position:
               
229-682
               

               
Cow position:
               
chr24:15861876-15861413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 93
               

               
Conread position:
               
229-687
               

               
Cow position:
               
chr24:43370973-43371425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 97
               

               
Conread position:
               
229-697
               

               
Cow position:
               
chr24:32205069-32204598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 103
               

               
Conread position:
               
230-589
               

               
Cow position:
               
chr24:35529649-35529988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
111, 92
               

               
Conread position:
               
230-697
               

               
Cow position:
               
chr24:27267360-27267803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
233-463
               

               
Cow position:
               
chr24:12992784-12993015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
106, 159
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr24:11734452-11734753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
106, 173
               

               
Conread position:
               
234-681
               

               
Cow position:
               
chr24:16994624-16995054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 23
               

               
Conread position:
               
236-480
               

               
Cow position:
               
chr24:5151967-5152209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 11
               

               
Conread position:
               
236-609
               

               
Cow position:
               
chr24:17955716-17955344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 217
               

               
Conread position:
               
237-697
               

               
Cow position:
               
chr24:6450248-6450703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 10
               

               
Conread position:
               
243-592
               

               
Cow position:
               
chr24:39226737-39227078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 145
               

               
Conread position:
               
243-676
               

               
Cow position:
               
chr24:18374513-18374935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 180
               

               
Conread position:
               
243-683
               

               
Cow position:
               
chr24:42825759-42825337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 204
               

               
Conread position:
               
243-693
               

               
Cow position:
               
chr24:25194007-25194453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 8
               

               
Conread position:
               
244-680
               

               
Cow position:
               
chr24:27906174-27906613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 149
               

               
Conread position:
               
244-696
               

               
Cow position:
               
chr24:11886897-11887344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 139
               

               
Conread position:
               
247-421
               

               
Cow position:
               
chr24:21264768-21264592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
95, 83
               

               
Conread position:
               
247-435
               

               
Cow position:
               
chr24:40408204-40408014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
97, 82
               

               
Conread position:
               
247-548
               

               
Cow position:
               
chr24:23442838-23442541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
128, 47
               

               
Conread position:
               
247-596
               

               
Cow position:
               
chr24:31324024-31324372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 9
               

               
Conread position:
               
247-693
               

               
Cow position:
               
chr24:41980922-41980473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 70
               

               
Conread position:
               
248-482
               

               
Cow position:
               
chr24:28353895-28354129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
94, 81
               

               
Conread position:
               
248-668
               

               
Cow position:
               
chr24:32124898-32124492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 63
               

               
Conread position:
               
248-680
               

               
Cow position:
               
chr24:27149141-27149557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 74
               

               
Conread position:
               
251-428
               

               
Cow position:
               
chr24:30776921-30776743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
84, 78
               

               
Conread position:
               
251-497
               

               
Cow position:
               
chr24:27207448-27207206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
91, 79
               

               
Conread position:
               
251-504
               

               
Cow position:
               
chr24:17363902-17363651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 171
               

               
Conread position:
               
251-595
               

               
Cow position:
               
chr24:26732194-26732536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
72, 46
               

               
Conread position:
               
252-559
               

               
Cow position:
               
chr24:18771435-18771129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
254-542
               

               
Cow position:
               
chr24:6487670-6487950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 46
               

               
Conread position:
               
254-603
               

               
Cow position:
               
chr24:27824214-27824557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 55
               

               
Conread position:
               
254-687
               

               
Cow position:
               
chr24:33372300-33372728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 116
               

               
Conread position:
               
257-596
               

               
Cow position:
               
chr24:27054153-27054501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
60, 175
               

               
Conread position:
               
257-630
               

               
Cow position:
               
chr24:2096136-2095760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 79
               

               
Conread position:
               
257-680
               

               
Cow position:
               
chr24:18474995-18474554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 31
               

               
Conread position:
               
257-697
               

               
Cow position:
               
chr24:10498963-10499410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 138
               

               
Conread position:
               
259-683
               

               
Cow position:
               
chr24:24755204-24755607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 50
               

               
Conread position:
               
259-686
               

               
Cow position:
               
chr24:19179690-19179255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
262-627
               

               
Cow position:
               
chr24:34008824-34008456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
263-453
               

               
Cow position:
               
chr24:31388294-31388480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
168, 11
               

               
Conread position:
               
265-555
               

               
Cow position:
               
chr24:6061638-6061353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
78, 57
               

               
Conread position:
               
265-664
               

               
Cow position:
               
chr24:14617417-14617818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
131, 49
               

               
Conread position:
               
266-611
               

               
Cow position:
               
chr24:33222178-33221829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 69
               

               
Conread position:
               
267-623
               

               
Cow position:
               
chr24:32158509-32158161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
239, 68
               

               
Conread position:
               
268-484
               

               
Cow position:
               
chr24:18695385-18695595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
74, 44
               

               
Conread position:
               
268-697
               

               
Cow position:
               
chr24:18343812-18344260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 61
               

               
Conread position:
               
270-426
               

               
Cow position:
               
chr24:27781720-27781883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 50
               

               
Conread position:
               
273-616
               

               
Cow position:
               
chr24:20250135-20249784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 179
               

               
Conread position:
               
274-443
               

               
Cow position:
               
chr24:27299941-27300108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 7
               

               
Conread position:
               
275-615
               

               
Cow position:
               
chr24:34396402-34396073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
220, 10
               

               
Conread position:
               
275-617
               

               
Cow position:
               
chr24:28327312-28326973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 55
               

               
Conread position:
               
277-683
               

               
Cow position:
               
chr24:24457474-24457064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 35
               

               
Conread position:
               
278-442
               

               
Cow position:
               
chr24:28332511-28332334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
62, 160
               

               
Conread position:
               
278-534
               

               
Cow position:
               
chr24:10841442-10841180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
70, 28
               

               
Conread position:
               
278-536
               

               
Cow position:
               
chr24:21918444-21918199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
92, 46
               

               
Conread position:
               
279-421
               

               
Cow position:
               
chr24:18328921-18328780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
65, 100
               

               
Conread position:
               
279-668
               

               
Cow position:
               
chr24:31036132-31036501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 38
               

               
Conread position:
               
280-684
               

               
Cow position:
               
chr24:21519215-21519610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
281-639
               

               
Cow position:
               
chr24:31359099-31359446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 120
               

               
Conread position:
               
282-445
               

               
Cow position:
               
chr24:29540133-29539967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
283-687
               

               
Cow position:
               
chr24:16509751-16510152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 31
               

               
Conread position:
               
285-544
               

               
Cow position:
               
chr24:40673656-40673385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
59, 165
               

               
Conread position:
               
286-618
               

               
Cow position:
               
chr24:33465819-33465512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
287-541
               

               
Cow position:
               
chr24:39833733-39833482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
54, 161
               

               
Conread position:
               
287-560
               

               
Cow position:
               
chr24:39842070-39841798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
57, 235
               

               
Conread position:
               
287-571
               

               
Cow position:
               
chr24:34579183-34578914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
54, 155
               

               
Conread position:
               
289-618
               

               
Cow position:
               
chr24:15373194-15373515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
289-694
               

               
Cow position:
               
chr24:16645537-16645142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 28
               

               
Conread position:
               
291-694
               

               
Cow position:
               
chr24:10125648-10126067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 166
               

               
Conread position:
               
293-618
               

               
Cow position:
               
chr24:28253495-28253831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
153, 43
               

               
Conread position:
               
296-684
               

               
Cow position:
               
chr24:18787127-18786746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
297-559
               

               
Cow position:
               
chr24:15707650-15707394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
297-697
               

               
Cow position:
               
chr24:28990358-28990765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 47
               

               
Conread position:
               
299-680
               

               
Cow position:
               
chr24:41423400-41423770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
300-697
               

               
Cow position:
               
chr24:39143400-39143806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
44, 145
               

               
Conread position:
               
301-554
               

               
Cow position:
               
chr24:29708007-29707746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
301-696
               

               
Cow position:
               
chr24:6132080-6131693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 115
               

               
Conread position:
               
302-694
               

               
Cow position:
               
chr24:16089030-16089417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 91
               

               
Conread position:
               
304-695
               

               
Cow position:
               
chr24:19186760-19187122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 43
               

               
Conread position:
               
305-697
               

               
Cow position:
               
chr24:22647545-22647146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
39, 122
               

               
Conread position:
               
307-680
               

               
Cow position:
               
chr24:352806-352429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 121
               

               
Conread position:
               
312-589
               

               
Cow position:
               
chr24:30897734-30897457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 139
               

               
Conread position:
               
312-610
               

               
Cow position:
               
chr24:17434415-17434712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 124
               

               
Conread position:
               
313-442
               

               
Cow position:
               
chr24:885878-885750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
313-614
               

               
Cow position:
               
chr24:14171889-14171588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
28, 138
               

               
Conread position:
               
314-637
               

               
Cow position:
               
chr24:26554791-26554468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
316-578
               

               
Cow position:
               
chr24:18355030-18355278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
22, 97
               

               
Conread position:
               
320-610
               

               
Cow position:
               
chr24:32070778-32071063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 122
               

               
Conread position:
               
320-676
               

               
Cow position:
               
chr24:37945818-37945475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
46, 22
               

               
Conread position:
               
322-502
               

               
Cow position:
               
chr24:27202411-27202595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 134
               

               
Conread position:
               
322-676
               

               
Cow position:
               
chr24:17833000-17832658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 136
               

               
Conread position:
               
322-680
               

               
Cow position:
               
chr24:21606847-21606501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
322-696
               

               
Cow position:
               
chr24:27220277-27219899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 131
               

               
Conread position:
               
326-443
               

               
Cow position:
               
chr24:17938585-17938700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
115, 18
               

               
Conread position:
               
326-604
               

               
Cow position:
               
chr24:16895618-16895341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
18, 102
               

               
Conread position:
               
326-617
               

               
Cow position:
               
chr24:18017047-18017336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 115
               

               
Conread position:
               
328-684
               

               
Cow position:
               
chr24:29586813-29587181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
15, 90
               

               
Conread position:
               
328-694
               

               
Cow position:
               
chr24:10299903-10300263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
332-555
               

               
Cow position:
               
chr24:25092354-25092568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 98
               

               
Conread position:
               
332-606
               

               
Cow position:
               
chr24:37037723-37038000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
332-641
               

               
Cow position:
               
chr24:6912527-6912225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
12, 62
               

               
Conread position:
               
333-622
               

               
Cow position:
               
chr24:5683106-5683393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
162, 35
               

               
Conread position:
               
334-592
               

               
Cow position:
               
chr24:19736502-19736251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
340-618
               

               
Cow position:
               
chr24:18314112-18313823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
341-616
               

               
Cow position:
               
chr24:24061966-24061699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
341-617
               

               
Cow position:
               
chr24:23187081-23186811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 47
               

               
Conread position:
               
341-683
               

               
Cow position:
               
chr24:35576699-35576362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 108
               

               
Conread position:
               
341-684
               

               
Cow position:
               
chr24:18357217-18356877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 48
               

               
Conread position:
               
343-537
               

               
Cow position:
               
chr24:17492153-17492327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
151, 63
               

               
Conread position:
               
343-589
               

               
Cow position:
               
chr24:26455677-26455922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
53, 83
               

               
Conread position:
               
347-556
               

               
Cow position:
               
chr24:4615677-4615468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
147, 79
               

               
Conread position:
               
348-620
               

               
Cow position:
               
chr24:28289405-28289142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
147, 20
               

               
Conread position:
               
348-684
               

               
Cow position:
               
chr24:7777773-7777455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
320, 75
               

               
Conread position:
               
348-697
               

               
Cow position:
               
chr24:12200570-12200215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
22, 92
               

               
Conread position:
               
349-618
               

               
Cow position:
               
chr24:8006155-8006416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 74
               

               
Conread position:
               
350-589
               

               
Cow position:
               
chr24:43967656-43967423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
141, 98
               

               
Conread position:
               
350-600
               

               
Cow position:
               
chr24:41512104-41511866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
145, 20
               

               
Conread position:
               
350-687
               

               
Cow position:
               
chr24:4724818-4725141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 92
               

               
Conread position:
               
354-684
               

               
Cow position:
               
chr24:34390147-34390451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
141, 14
               

               
Conread position:
               
354-684
               

               
Cow position:
               
chr24:37395359-37395026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
141, 21
               

               
Conread position:
               
358-671
               

               
Cow position:
               
chr24:36008338-36008652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
9, 88
               

               
Conread position:
               
358-697
               

               
Cow position:
               
chr24:32739419-32739071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
361-680
               

               
Cow position:
               
chr24:38006849-38006537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
134, 14
               

               
Conread position:
               
362-600
               

               
Cow position:
               
chr24:24662272-24662039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 30
               

               
Conread position:
               
363-675
               

               
Cow position:
               
chr24:28233907-28234211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 63
               

               
Conread position:
               
364-682
               

               
Cow position:
               
chr24:14550657-14550967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
364-697
               

               
Cow position:
               
chr24:389960-390292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
96, 63
               

               
Conread position:
               
365-684
               

               
Cow position:
               
chr24:36711061-36711376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
64, 59
               

               
Conread position:
               
368-676
               

               
Cow position:
               
chr24:27713541-27713239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 33
               

               
Conread position:
               
368-684
               

               
Cow position:
               
chr24:23863771-23863445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
369-614
               

               
Cow position:
               
chr24:14457859-14457618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
21, 40
               

               
Conread position:
               
371-680
               

               
Cow position:
               
chr24:29606177-29605858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 172
               

               
Conread position:
               
374-694
               

               
Cow position:
               
chr24:13352913-13353215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
375-672
               

               
Cow position:
               
chr24:35631857-35632148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
54, 45
               

               
Conread position:
               
375-697
               

               
Cow position:
               
chr24:2359306-2358992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 50
               

               
Conread position:
               
376-562
               

               
Cow position:
               
chr24:40837648-40837826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
376-667
               

               
Cow position:
               
chr24:26880637-26880917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
206, 49
               

               
Conread position:
               
377-680
               

               
Cow position:
               
chr24:40537460-40537157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
114, 48
               

               
Conread position:
               
378-601
               

               
Cow position:
               
chr24:32095193-32095402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
119, 32
               

               
Conread position:
               
378-669
               

               
Cow position:
               
chr24:29561701-29561415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
379-697
               

               
Cow position:
               
chr24:39523573-39523259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 68
               

               
Conread position:
               
380-618
               

               
Cow position:
               
chr24:39791414-39791652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 75
               

               
Conread position:
               
383-691
               

               
Cow position:
               
chr24:41405774-41406080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
383-697
               

               
Cow position:
               
chr24:37267539-37267860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
112, 72
               

               
Conread position:
               
392-690
               

               
Cow position:
               
chr24:43832410-43832707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
392-691
               

               
Cow position:
               
chr24:37975094-37974797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 31
               

               
Conread position:
               
394-597
               

               
Cow position:
               
chr24:27900617-27900816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
100, 138
               

               
Conread position:
               
394-608
               

               
Cow position:
               
chr24:16895241-16895038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 53
               

               
Conread position:
               
394-692
               

               
Cow position:
               
chr24:27349290-27348987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
395-680
               

               
Cow position:
               
chr24:42862514-42862800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
100, 28
               

               
Conread position:
               
399-697
               

               
Cow position:
               
chr24:18614893-18615193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
401-680
               

               
Cow position:
               
chr24:230172-230455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
402-618
               

               
Cow position:
               
chr24:30308660-30308444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
58, 132
               

               
Conread position:
               
402-641
               

               
Cow position:
               
chr24:28342247-28342491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
403-602
               

               
Cow position:
               
chr24:34496016-34496218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 44
               

               
Conread position:
               
406-613
               

               
Cow position:
               
chr24:28042873-28043080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 129
               

               
Conread position:
               
407-683
               

               
Cow position:
               
chr24:28600537-28600260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
408-693
               

               
Cow position:
               
chr24:175594-175320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
46, 127
               

               
Conread position:
               
408-693
               

               
Cow position:
               
chr24:39911134-39910842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
409-684
               

               
Cow position:
               
chr24:20807439-20807703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
89, 35
               

               
Conread position:
               
409-695
               

               
Cow position:
               
chr24:37823432-37823716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
65, 35
               

               
Conread position:
               
411-690
               

               
Cow position:
               
chr24:15288726-15289011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
31, 128
               

               
Conread position:
               
411-697
               

               
Cow position:
               
chr24:13948027-13948317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 37
               

               
Conread position:
               
414-671
               

               
Cow position:
               
chr24:25122262-25122503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
414-680
               

               
Cow position:
               
chr24:20364501-20364241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
417-684
               

               
Cow position:
               
chr24:27284732-27285003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 33
               

               
Conread position:
               
420-693
               

               
Cow position:
               
chr24:2992963-2992692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
223, 42
               

               
Conread position:
               
427-697
               

               
Cow position:
               
chr24:27202012-27202269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
437-607
               

               
Cow position:
               
chr24:11007389-11007556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 73
               

               
Conread position:
               
438-686
               

               
Cow position:
               
chr24:21835028-21834781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
442-684
               

               
Cow position:
               
chr24:27740127-27740357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
445-610
               

               
Cow position:
               
chr24:20969725-20969563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 69
               

               
Conread position:
               
447-627
               

               
Cow position:
               
chr24:28689602-28689789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
448-611
               

               
Cow position:
               
chr24:43928421-43928260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
449-680
               

               
Cow position:
               
chr24:23667177-23666950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
209, 52
               

               
Conread position:
               
449-681
               

               
Cow position:
               
chr24:22133111-22133342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
450-693
               

               
Cow position:
               
chr24:36036112-36035862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
144, 45
               

               
Conread position:
               
451-697
               

               
Cow position:
               
chr24:20323558-20323304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 37
               

               
Conread position:
               
452-611
               

               
Cow position:
               
chr24:42981815-42981659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
45, 71
               

               
Conread position:
               
453-677
               

               
Cow position:
               
chr24:6723712-6723925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
454-608
               

               
Cow position:
               
chr24:16118306-16118462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
454-694
               

               
Cow position:
               
chr24:6151734-6151965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
454-694
               

               
Cow position:
               
chr24:28470734-28470479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
455-678
               

               
Cow position:
               
chr24:5360665-5360884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
456-608
               

               
Cow position:
               
chr24:28344333-28344490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
456-637
               

               
Cow position:
               
chr24:17375586-17375766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
456-666
               

               
Cow position:
               
chr24:41916201-41916418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
456-680
               

               
Cow position:
               
chr24:11028737-11028512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
185, 35
               

               
Conread position:
               
456-693
               

               
Cow position:
               
chr24:26001335-26001575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
456-694
               

               
Cow position:
               
chr24:2379900-2380144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
456-697
               

               
Cow position:
               
chr24:42175478-42175717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
41, 90
               

               
Conread position:
               
457-681
               

               
Cow position:
               
chr24:37651674-37651897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
457-696
               

               
Cow position:
               
chr24:33244345-33244577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
459-696
               

               
Cow position:
               
chr24:28510748-28510982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
35, 76
               

               
Conread position:
               
460-680
               

               
Cow position:
               
chr24:26848777-26848566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
460-684
               

               
Cow position:
               
chr24:8676775-8677006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 76
               

               
Conread position:
               
460-697
               

               
Cow position:
               
chr24:29985032-29984798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
461-614
               

               
Cow position:
               
chr24:40983084-40983237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
465-697
               

               
Cow position:
               
chr24:42687805-42688031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
466-661
               

               
Cow position:
               
chr24:36303359-36303162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
467-680
               

               
Cow position:
               
chr24:37252121-37252332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
114, 17
               

               
Conread position:
               
468-668
               

               
Cow position:
               
chr24:18668538-18668743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 68
               

               
Conread position:
               
473-676
               

               
Cow position:
               
chr24:42726415-42726629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
473-683
               

               
Cow position:
               
chr24:42226238-42226442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
21, 58
               

               
Conread position:
               
473-684
               

               
Cow position:
               
chr24:32891079-32890867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
473-695
               

               
Cow position:
               
chr24:13888669-13888896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
473-696
               

               
Cow position:
               
chr24:13587027-13586798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
474-680
               

               
Cow position:
               
chr24:35310687-35310902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
474-696
               

               
Cow position:
               
chr24:22567069-22567299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
475-680
               

               
Cow position:
               
chr24:7757739-7757944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 60
               

               
Conread position:
               
475-697
               

               
Cow position:
               
chr24:27448611-27448841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
476-611
               

               
Cow position:
               
chr24:42380765-42380636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
476-675
               

               
Cow position:
               
chr24:29539961-29539760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
477-591
               

               
Cow position:
               
chr24:12657080-12656966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 58
               

               
Conread position:
               
477-682
               

               
Cow position:
               
chr24:12077559-12077774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
477-696
               

               
Cow position:
               
chr24:41566126-41565909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
157, 19
               

               
Conread position:
               
478-678
               

               
Cow position:
               
chr24:13610281-13610474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
479-666
               

               
Cow position:
               
chr24:42007994-42008180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
164, 54
               

               
Conread position:
               
480-697
               

               
Cow position:
               
chr24:18810803-18811026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
481-683
               

               
Cow position:
               
chr24:37453531-37453320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
481-697
               

               
Cow position:
               
chr24:36775804-36775579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
482-676
               

               
Cow position:
               
chr24:39218579-39218381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
482-680
               

               
Cow position:
               
chr24:11836430-11836226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
482-697
               

               
Cow position:
               
chr24:3412657-3412872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
486-600
               

               
Cow position:
               
chr24:18968826-18968940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
12, 49
               

               
Conread position:
               
486-684
               

               
Cow position:
               
chr24:29677938-29677728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
486-692
               

               
Cow position:
               
chr24:15557364-15557154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
487-679
               

               
Cow position:
               
chr24:6886990-6887180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
493-686
               

               
Cow position:
               
chr24:18302700-18302896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
493-695
               

               
Cow position:
               
chr24:27940635-27940438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
78, 42
               

               
Conread position:
               
493-697
               

               
Cow position:
               
chr24:43499644-43499850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
496-667
               

               
Cow position:
               
chr24:17073268-17073103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
147, 22
               

               
Conread position:
               
496-678
               

               
Cow position:
               
chr24:39961009-39960836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
496-679
               

               
Cow position:
               
chr24:18874832-18874646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
146, 38
               

               
Conread position:
               
496-682
               

               
Cow position:
               
chr24:27553084-27553277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
496-684
               

               
Cow position:
               
chr24:5152512-5152705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
147, 39
               

               
Conread position:
               
496-684
               

               
Cow position:
               
chr24:34302047-34301858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
147, 7
               

               
Conread position:
               
496-695
               

               
Cow position:
               
chr24:161992-162191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 38
               

               
Conread position:
               
496-697
               

               
Cow position:
               
chr24:43598878-43598687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
91, 26
               

               
Conread position:
               
497-696
               

               
Cow position:
               
chr24:358356-358561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 37
               

               
Conread position:
               
497-697
               

               
Cow position:
               
chr24:14587767-14587965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
498-620
               

               
Cow position:
               
chr24:35030070-35029949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
498-673
               

               
Cow position:
               
chr24:32230515-32230336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
498-697
               

               
Cow position:
               
chr24:250548-250345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
499-611
               

               
Cow position:
               
chr24:13058015-13058126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 19
               

               
Conread position:
               
499-617
               

               
Cow position:
               
chr24:256018-256135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
499-677
               

               
Cow position:
               
chr24:4635176-4634993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
143, 36
               

               
Conread position:
               
499-677
               

               
Cow position:
               
chr24:35250120-35249937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
136, 37
               

               
Conread position:
               
499-680
               

               
Cow position:
               
chr24:12120888-12121074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
82, 37
               

               
Conread position:
               
499-683
               

               
Cow position:
               
chr24:18405289-18405099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
143, 35
               

               
Conread position:
               
499-692
               

               
Cow position:
               
chr24:10219393-10219199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
144, 36
               

               
Conread position:
               
499-693
               

               
Cow position:
               
chr24:28024271-28024456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
159, 36
               

               
Conread position:
               
499-694
               

               
Cow position:
               
chr24:16640901-16641100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
499-695
               

               
Cow position:
               
chr24:17689619-17689419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
499-696
               

               
Cow position:
               
chr24:44776185-44775981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
140, 35
               

               
Conread position:
               
499-697
               

               
Cow position:
               
chr24:36286561-36286762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
144, 35
               

               
Conread position:
               
500-617
               

               
Cow position:
               
chr24:7113215-7113331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
500-680
               

               
Cow position:
               
chr24:23046905-23046720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
143, 34
               

               
Conread position:
               
500-681
               

               
Cow position:
               
chr24:2261660-2261846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
142, 34
               

               
Conread position:
               
500-697
               

               
Cow position:
               
chr24:40025384-40025191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
143, 34
               

               
Conread position:
               
501-680
               

               
Cow position:
               
chr24:18750701-18750885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
140, 33
               

               
Conread position:
               
502-686
               

               
Cow position:
               
chr24:20017433-20017243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
141, 32
               

               
Conread position:
               
504-681
               

               
Cow position:
               
chr24:40811676-40811844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
139, 20
               

               
Conread position:
               
506-697
               

               
Cow position:
               
chr24:24091341-24091143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
507-695
               

               
Cow position:
               
chr24:26808590-26808781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
508-617
               

               
Cow position:
               
chr24:38114852-38114744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
509-614
               

               
Cow position:
               
chr24:43024262-43024366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
509-668
               

               
Cow position:
               
chr24:27270928-27271092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
509-695
               

               
Cow position:
               
chr24:22419962-22420155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
133, 25
               

               
Conread position:
               
511-599
               

               
Cow position:
               
chr24:42815535-42815622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
89
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
512-668
               

               
Cow position:
               
chr24:43358703-43358858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
131, 22
               

               
Conread position:
               
512-691
               

               
Cow position:
               
chr24:34772308-34772117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 22
               

               
Conread position:
               
512-694
               

               
Cow position:
               
chr24:25947857-25947670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
131, 22
               

               
Conread position:
               
513-620
               

               
Cow position:
               
chr24:28186508-28186401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
513-639
               

               
Cow position:
               
chr24:33311350-33311230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
513-680
               

               
Cow position:
               
chr24:7275709-7275873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
130, 21
               

               
Conread position:
               
513-684
               

               
Cow position:
               
chr24:31383122-31383289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
130, 16
               

               
Conread position:
               
513-685
               

               
Cow position:
               
chr24:15340449-15340285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
513-696
               

               
Cow position:
               
chr24:30325778-30325591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
513-696
               

               
Cow position:
               
chr24:40055505-40055318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
130, 21
               

               
Conread position:
               
513-697
               

               
Cow position:
               
chr24:28256053-28255869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
128, 21
               

               
Conread position:
               
516-695
               

               
Cow position:
               
chr24:22129629-22129454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
127, 18
               

               
Conread position:
               
516-697
               

               
Cow position:
               
chr24:21656415-21656601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
518-696
               

               
Cow position:
               
chr24:26588231-26588410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
124, 16
               

               
Conread position:
               
521-697
               

               
Cow position:
               
chr24:35335105-35335280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
137, 13
               

               
Conread position:
               
522-683
               

               
Cow position:
               
chr24:18811607-18811453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
526-680
               

               
Cow position:
               
chr24:38428094-38427935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
116, 8
               

               
Conread position:
               
533-677
               

               
Cow position:
               
chr24:34768543-34768404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
533-680
               

               
Cow position:
               
chr24:27719502-27719355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 77
               

               
Conread position:
               
533-680
               

               
Cow position:
               
chr24:38693854-38693702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
533-695
               

               
Cow position:
               
chr24:24136378-24136218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
125, 92
               

               
Conread position:
               
535-677
               

               
Cow position:
               
chr24:24013786-24013937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
535-686
               

               
Cow position:
               
chr24:6488235-6488385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
123, 94
               

               
Conread position:
               
537-693
               

               
Cow position:
               
chr24:41925851-41926004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
107, 71
               

               
Conread position:
               
538-641
               

               
Cow position:
               
chr24:27386963-27386860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
538-684
               

               
Cow position:
               
chr24:43027197-43027045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
538-687
               

               
Cow position:
               
chr24:19763501-19763346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
540-695
               

               
Cow position:
               
chr24:2223180-2223031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
118, 77
               

               
Conread position:
               
552-685
               

               
Cow position:
               
chr24:43011328-43011185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               
Show alignments to all cow chromosomes.