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Cow genome map

           
Conread name:
           
Pig3-SRG8015N22
        

               
Conread position:
               
9-553
               

               
Cow position:
               
chr3:56523939-56523401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 157
               

               
Conread position:
               
9-589
               

               
Cow position:
               
chr3:5373831-5374409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 49
               

               
Conread position:
               
10-680
               

               
Cow position:
               
chr3:56476188-56476849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 159
               

               
Conread position:
               
10-687
               

               
Cow position:
               
chr3:8392855-8393520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 87
               

               
Conread position:
               
10-697
               

               
Cow position:
               
chr3:53739666-53738992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 60
               

               
Conread position:
               
11-697
               

               
Cow position:
               
chr3:52652562-52651887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 44
               

               
Conread position:
               
76-562
               

               
Cow position:
               
chr3:81278127-81277638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 129
               

               
Conread position:
               
93-506
               

               
Cow position:
               
chr3:56704264-56703851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
109, 14
               

               
Conread position:
               
103-467
               

               
Cow position:
               
chr3:53510072-53509722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
65, 46
               

               
Conread position:
               
134-568
               

               
Cow position:
               
chr3:23092352-23091916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 19
               

               
Conread position:
               
135-684
               

               
Cow position:
               
chr3:68708373-68707843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 116
               

               
Conread position:
               
159-587
               

               
Cow position:
               
chr3:56707-56298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 12
               

               
Conread position:
               
159-592
               

               
Cow position:
               
chr3:54862764-54862335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
159-683
               

               
Cow position:
               
chr3:73467277-73467804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 12
               

               
Conread position:
               
168-416
               

               
Cow position:
               
chr3:51609481-51609733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
169-669
               

               
Cow position:
               
chr3:4031629-4032125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 162
               

               
Conread position:
               
171-400
               

               
Cow position:
               
chr3:83988150-83988383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
170, 44
               

               
Conread position:
               
174-604
               

               
Cow position:
               
chr3:17895525-17895945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 125
               

               
Conread position:
               
174-641
               

               
Cow position:
               
chr3:63179543-63179990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 35
               

               
Conread position:
               
174-676
               

               
Cow position:
               
chr3:23471799-23471292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 233
               

               
Conread position:
               
174-680
               

               
Cow position:
               
chr3:21081711-21081205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 19
               

               
Conread position:
               
174-694
               

               
Cow position:
               
chr3:14602040-14601523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 40
               

               
Conread position:
               
175-695
               

               
Cow position:
               
chr3:66885364-66884841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 48
               

               
Conread position:
               
178-446
               

               
Cow position:
               
chr3:60855156-60854897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
161, 5
               

               
Conread position:
               
178-548
               

               
Cow position:
               
chr3:74699719-74699342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
164, 5
               

               
Conread position:
               
178-626
               

               
Cow position:
               
chr3:8457336-8457772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
180-548
               

               
Cow position:
               
chr3:48629914-48629548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
46, 5
               

               
Conread position:
               
182-684
               

               
Cow position:
               
chr3:15057919-15057463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
350, 130
               

               
Conread position:
               
183-611
               

               
Cow position:
               
chr3:78894632-78894238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
182, 26
               

               
Conread position:
               
183-696
               

               
Cow position:
               
chr3:15158725-15159220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 26
               

               
Conread position:
               
184-608
               

               
Cow position:
               
chr3:39171799-39171390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
184-676
               

               
Cow position:
               
chr3:54740192-54739729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
185-446
               

               
Cow position:
               
chr3:77467614-77467878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
185-555
               

               
Cow position:
               
chr3:17957149-17957514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 84
               

               
Conread position:
               
185-561
               

               
Cow position:
               
chr3:74878908-74878536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
59, 93
               

               
Conread position:
               
187-420
               

               
Cow position:
               
chr3:8557099-8556869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
21, 117
               

               
Conread position:
               
187-684
               

               
Cow position:
               
chr3:4461807-4461311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 137
               

               
Conread position:
               
191-685
               

               
Cow position:
               
chr3:13330084-13329613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 55
               

               
Conread position:
               
193-465
               

               
Cow position:
               
chr3:73417216-73417481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
151, 16
               

               
Conread position:
               
194-609
               

               
Cow position:
               
chr3:5096894-5097307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 130
               

               
Conread position:
               
195-590
               

               
Cow position:
               
chr3:19006359-19006739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 136
               

               
Conread position:
               
195-668
               

               
Cow position:
               
chr3:58540838-58540354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 46
               

               
Conread position:
               
195-680
               

               
Cow position:
               
chr3:39970176-39969688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 26
               

               
Conread position:
               
195-684
               

               
Cow position:
               
chr3:68881419-68880952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
195-692
               

               
Cow position:
               
chr3:78946147-78945636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 86
               

               
Conread position:
               
197-571
               

               
Cow position:
               
chr3:73759825-73759454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
197-687
               

               
Cow position:
               
chr3:9641258-9641739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 115
               

               
Conread position:
               
199-626
               

               
Cow position:
               
chr3:63147446-63147034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
171, 21
               

               
Conread position:
               
199-684
               

               
Cow position:
               
chr3:3985026-3985496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
459, 125
               

               
Conread position:
               
199-684
               

               
Cow position:
               
chr3:65413579-65413087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 48
               

               
Conread position:
               
200-524
               

               
Cow position:
               
chr3:56637363-56637682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
143, 176
               

               
Conread position:
               
202-596
               

               
Cow position:
               
chr3:10347053-10347443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 13
               

               
Conread position:
               
202-670
               

               
Cow position:
               
chr3:77271569-77271122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 137
               

               
Conread position:
               
207-555
               

               
Cow position:
               
chr3:55117268-55116930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
137, 223
               

               
Conread position:
               
207-597
               

               
Cow position:
               
chr3:13577481-13577113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
30, 41
               

               
Conread position:
               
207-597
               

               
Cow position:
               
chr3:55085480-55085081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 115
               

               
Conread position:
               
207-614
               

               
Cow position:
               
chr3:45534595-45534193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
207-626
               

               
Cow position:
               
chr3:42480328-42480731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
137, 36
               

               
Conread position:
               
207-639
               

               
Cow position:
               
chr3:28898518-28898091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 40
               

               
Conread position:
               
207-640
               

               
Cow position:
               
chr3:11987034-11987457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 97
               

               
Conread position:
               
207-671
               

               
Cow position:
               
chr3:17222439-17221967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
207-693
               

               
Cow position:
               
chr3:76138194-76138648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
164, 14
               

               
Conread position:
               
210-462
               

               
Cow position:
               
chr3:22170896-22171145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
49, 113
               

               
Conread position:
               
210-481
               

               
Cow position:
               
chr3:63861194-63860916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 214
               

               
Conread position:
               
210-615
               

               
Cow position:
               
chr3:56059514-56059918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 103
               

               
Conread position:
               
210-676
               

               
Cow position:
               
chr3:75158071-75158526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 108
               

               
Conread position:
               
211-532
               

               
Cow position:
               
chr3:13899745-13899422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
211-588
               

               
Cow position:
               
chr3:72675795-72676171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 244
               

               
Conread position:
               
211-676
               

               
Cow position:
               
chr3:53150035-53150504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 104
               

               
Conread position:
               
211-678
               

               
Cow position:
               
chr3:10958520-10958071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 36
               

               
Conread position:
               
211-685
               

               
Cow position:
               
chr3:78076897-78077370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 192
               

               
Conread position:
               
211-687
               

               
Cow position:
               
chr3:5365394-5365848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 97
               

               
Conread position:
               
212-442
               

               
Cow position:
               
chr3:48370840-48371074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
212-444
               

               
Cow position:
               
chr3:15081030-15080807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
212-445
               

               
Cow position:
               
chr3:15661992-15661759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 113
               

               
Conread position:
               
212-550
               

               
Cow position:
               
chr3:4457367-4457029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 159
               

               
Conread position:
               
212-597
               

               
Cow position:
               
chr3:59588228-59588599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
132, 100
               

               
Conread position:
               
212-610
               

               
Cow position:
               
chr3:57624173-57624566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
212-680
               

               
Cow position:
               
chr3:20663829-20663367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
138, 228
               

               
Conread position:
               
212-694
               

               
Cow position:
               
chr3:2518828-2518351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 247
               

               
Conread position:
               
212-697
               

               
Cow position:
               
chr3:55124569-55124093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 118
               

               
Conread position:
               
212-697
               

               
Cow position:
               
chr3:71246746-71247206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
214-395
               

               
Cow position:
               
chr3:22908123-22907940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
214-398
               

               
Cow position:
               
chr3:58158753-58158569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
127, 23
               

               
Conread position:
               
214-424
               

               
Cow position:
               
chr3:32356630-32356843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
214-424
               

               
Cow position:
               
chr3:77753806-77754019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
214-432
               

               
Cow position:
               
chr3:72174136-72173914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 41
               

               
Conread position:
               
214-438
               

               
Cow position:
               
chr3:20129652-20129879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
31, 99
               

               
Conread position:
               
214-438
               

               
Cow position:
               
chr3:58350299-58350522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
128, 49
               

               
Conread position:
               
214-439
               

               
Cow position:
               
chr3:75727878-75727649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
214-442
               

               
Cow position:
               
chr3:61678402-61678632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
150, 113
               

               
Conread position:
               
214-444
               

               
Cow position:
               
chr3:7408194-7408428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
214-445
               

               
Cow position:
               
chr3:2483164-2483387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
152, 100
               

               
Conread position:
               
214-445
               

               
Cow position:
               
chr3:18763605-18763834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
130, 99
               

               
Conread position:
               
214-445
               

               
Cow position:
               
chr3:23277834-23277602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
40, 133
               

               
Conread position:
               
214-445
               

               
Cow position:
               
chr3:31903397-31903173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
214-445
               

               
Cow position:
               
chr3:81939962-81940197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
214-446
               

               
Cow position:
               
chr3:79148565-79148327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
214-459
               

               
Cow position:
               
chr3:27285936-27286185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 217
               

               
Conread position:
               
214-460
               

               
Cow position:
               
chr3:8716958-8717208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
214-462
               

               
Cow position:
               
chr3:31501064-31501306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 33
               

               
Conread position:
               
214-465
               

               
Cow position:
               
chr3:38497663-38497902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
214-469
               

               
Cow position:
               
chr3:48530349-48530611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
128, 14
               

               
Conread position:
               
214-476
               

               
Cow position:
               
chr3:19198392-19198647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
128, 110
               

               
Conread position:
               
214-480
               

               
Cow position:
               
chr3:7858063-7858344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
97, 255
               

               
Conread position:
               
214-482
               

               
Cow position:
               
chr3:78200978-78201242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 197
               

               
Conread position:
               
214-487
               

               
Cow position:
               
chr3:17952367-17952637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 125
               

               
Conread position:
               
214-487
               

               
Cow position:
               
chr3:18863317-18863597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
38, 52
               

               
Conread position:
               
214-489
               

               
Cow position:
               
chr3:70333762-70333500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
156, 33
               

               
Conread position:
               
214-494
               

               
Cow position:
               
chr3:57554136-57553862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 86
               

               
Conread position:
               
214-494
               

               
Cow position:
               
chr3:78782685-78782944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
214-499
               

               
Cow position:
               
chr3:30358923-30358641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
151, 121
               

               
Conread position:
               
214-504
               

               
Cow position:
               
chr3:11019829-11020115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 83
               

               
Conread position:
               
214-506
               

               
Cow position:
               
chr3:9843295-9843586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
214-506
               

               
Cow position:
               
chr3:80082106-80081814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
227, 51
               

               
Conread position:
               
214-514
               

               
Cow position:
               
chr3:59514822-59515111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 115
               

               
Conread position:
               
214-516
               

               
Cow position:
               
chr3:8147952-8147658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
157, 40
               

               
Conread position:
               
214-516
               

               
Cow position:
               
chr3:69849791-69849498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
215, 103
               

               
Conread position:
               
214-520
               

               
Cow position:
               
chr3:69962000-69961702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 108
               

               
Conread position:
               
214-529
               

               
Cow position:
               
chr3:45523975-45524289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
134, 91
               

               
Conread position:
               
214-531
               

               
Cow position:
               
chr3:5851216-5850905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
214-531
               

               
Cow position:
               
chr3:46128259-46127940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
214-539
               

               
Cow position:
               
chr3:33698432-33698762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 217
               

               
Conread position:
               
214-550
               

               
Cow position:
               
chr3:31298449-31298121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
134, 236
               

               
Conread position:
               
214-550
               

               
Cow position:
               
chr3:61857207-61857548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 315
               

               
Conread position:
               
214-557
               

               
Cow position:
               
chr3:79592178-79591842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 212
               

               
Conread position:
               
214-561
               

               
Cow position:
               
chr3:31047231-31046899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 50
               

               
Conread position:
               
214-563
               

               
Cow position:
               
chr3:66610127-66609789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 102
               

               
Conread position:
               
214-567
               

               
Cow position:
               
chr3:72018834-72019175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
155, 26
               

               
Conread position:
               
214-594
               

               
Cow position:
               
chr3:59101546-59101913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
160, 95
               

               
Conread position:
               
214-601
               

               
Cow position:
               
chr3:42423620-42423235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 104
               

               
Conread position:
               
214-602
               

               
Cow position:
               
chr3:2216071-2216462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
214-603
               

               
Cow position:
               
chr3:62826912-62826524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 231
               

               
Conread position:
               
214-606
               

               
Cow position:
               
chr3:55272329-55271947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 24
               

               
Conread position:
               
214-609
               

               
Cow position:
               
chr3:14626439-14626049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 33
               

               
Conread position:
               
214-610
               

               
Cow position:
               
chr3:5101049-5100670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 43
               

               
Conread position:
               
214-611
               

               
Cow position:
               
chr3:37599705-37599326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 98
               

               
Conread position:
               
214-611
               

               
Cow position:
               
chr3:80053823-80053441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 95
               

               
Conread position:
               
214-615
               

               
Cow position:
               
chr3:62789493-62789068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 271
               

               
Conread position:
               
214-617
               

               
Cow position:
               
chr3:49218596-49218198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
214-618
               

               
Cow position:
               
chr3:14263103-14263502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 121
               

               
Conread position:
               
214-620
               

               
Cow position:
               
chr3:59630789-59630401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 109
               

               
Conread position:
               
214-621
               

               
Cow position:
               
chr3:53112879-53113288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 246
               

               
Conread position:
               
214-627
               

               
Cow position:
               
chr3:81371367-81371767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 98
               

               
Conread position:
               
214-639
               

               
Cow position:
               
chr3:81471389-81470964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
214-641
               

               
Cow position:
               
chr3:6689702-6690133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 235
               

               
Conread position:
               
214-641
               

               
Cow position:
               
chr3:70566027-70565604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 98
               

               
Conread position:
               
214-648
               

               
Cow position:
               
chr3:29891706-29891268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
127, 74
               

               
Conread position:
               
214-659
               

               
Cow position:
               
chr3:64011104-64010662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 19
               

               
Conread position:
               
214-667
               

               
Cow position:
               
chr3:7566708-7566259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 133
               

               
Conread position:
               
214-668
               

               
Cow position:
               
chr3:2036009-2036467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 126
               

               
Conread position:
               
214-671
               

               
Cow position:
               
chr3:22676371-22675941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 62
               

               
Conread position:
               
214-676
               

               
Cow position:
               
chr3:59451306-59451769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
103, 33
               

               
Conread position:
               
214-676
               

               
Cow position:
               
chr3:70895757-70896210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 194
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr3:2674740-2675207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 108
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr3:11254441-11253990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 54
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr3:53221730-53222187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 43
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr3:83442168-83441718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 33
               

               
Conread position:
               
214-683
               

               
Cow position:
               
chr3:48362794-48363247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 65
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr3:13353071-13353543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 33
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr3:35299385-35299867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr3:48241332-48241787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 108
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr3:57754769-57754295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 26
               

               
Conread position:
               
214-684
               

               
Cow position:
               
chr3:79884775-79884301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
214-687
               

               
Cow position:
               
chr3:45184134-45183639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 33
               

               
Conread position:
               
214-687
               

               
Cow position:
               
chr3:56582554-56583030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 98
               

               
Conread position:
               
214-693
               

               
Cow position:
               
chr3:210033-210511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 99
               

               
Conread position:
               
214-693
               

               
Cow position:
               
chr3:55970218-55970703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 27
               

               
Conread position:
               
214-694
               

               
Cow position:
               
chr3:48852255-48851774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 43
               

               
Conread position:
               
214-694
               

               
Cow position:
               
chr3:83474460-83474942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 29
               

               
Conread position:
               
214-695
               

               
Cow position:
               
chr3:1830854-1830383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
214-695
               

               
Cow position:
               
chr3:9663476-9662978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 205
               

               
Conread position:
               
214-695
               

               
Cow position:
               
chr3:25690499-25690995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 21
               

               
Conread position:
               
214-695
               

               
Cow position:
               
chr3:53270537-53271023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 106
               

               
Conread position:
               
214-695
               

               
Cow position:
               
chr3:57577410-57577882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 26
               

               
Conread position:
               
214-695
               

               
Cow position:
               
chr3:71497435-71496941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 177
               

               
Conread position:
               
214-695
               

               
Cow position:
               
chr3:83490787-83491272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 242
               

               
Conread position:
               
214-696
               

               
Cow position:
               
chr3:14465993-14465526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 73
               

               
Conread position:
               
214-696
               

               
Cow position:
               
chr3:16752536-16752064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
214-696
               

               
Cow position:
               
chr3:23169359-23168876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 198
               

               
Conread position:
               
214-696
               

               
Cow position:
               
chr3:48252608-48253072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 46
               

               
Conread position:
               
214-696
               

               
Cow position:
               
chr3:61539507-61539993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 239
               

               
Conread position:
               
214-696
               

               
Cow position:
               
chr3:79220560-79221046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
214-697
               

               
Cow position:
               
chr3:15954366-15953888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 130
               

               
Conread position:
               
214-697
               

               
Cow position:
               
chr3:50768390-50768871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
214-697
               

               
Cow position:
               
chr3:53429180-53428724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 92
               

               
Conread position:
               
214-697
               

               
Cow position:
               
chr3:53909825-53910296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 21
               

               
Conread position:
               
214-697
               

               
Cow position:
               
chr3:59604582-59605034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 33
               

               
Conread position:
               
214-697
               

               
Cow position:
               
chr3:68586749-68587212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
214-697
               

               
Cow position:
               
chr3:80071828-80072335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 33
               

               
Conread position:
               
215-419
               

               
Cow position:
               
chr3:36657058-36656854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
117, 133
               

               
Conread position:
               
215-428
               

               
Cow position:
               
chr3:18854805-18855018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
129, 94
               

               
Conread position:
               
215-432
               

               
Cow position:
               
chr3:56704825-56704616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
127, 88
               

               
Conread position:
               
215-434
               

               
Cow position:
               
chr3:45312766-45312979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
154, 31
               

               
Conread position:
               
215-438
               

               
Cow position:
               
chr3:33633176-33632958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
215-445
               

               
Cow position:
               
chr3:83920908-83921138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 181
               

               
Conread position:
               
215-446
               

               
Cow position:
               
chr3:58206739-58206510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
215-462
               

               
Cow position:
               
chr3:22021261-22021017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
132, 166
               

               
Conread position:
               
215-464
               

               
Cow position:
               
chr3:34316252-34315998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
129, 240
               

               
Conread position:
               
215-482
               

               
Cow position:
               
chr3:13118061-13118316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
129, 27
               

               
Conread position:
               
215-484
               

               
Cow position:
               
chr3:41367271-41367004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 32
               

               
Conread position:
               
215-489
               

               
Cow position:
               
chr3:82657373-82657106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
167, 94
               

               
Conread position:
               
215-503
               

               
Cow position:
               
chr3:44623185-44622890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
107, 32
               

               
Conread position:
               
215-531
               

               
Cow position:
               
chr3:21341251-21340937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 21
               

               
Conread position:
               
215-539
               

               
Cow position:
               
chr3:29807174-29807494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 229
               

               
Conread position:
               
215-558
               

               
Cow position:
               
chr3:71430501-71430154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 241
               

               
Conread position:
               
215-563
               

               
Cow position:
               
chr3:65800307-65800640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
215-594
               

               
Cow position:
               
chr3:38346913-38347276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 133
               

               
Conread position:
               
215-596
               

               
Cow position:
               
chr3:27532950-27532565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 210
               

               
Conread position:
               
215-596
               

               
Cow position:
               
chr3:79292546-79292916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 107
               

               
Conread position:
               
215-600
               

               
Cow position:
               
chr3:29887712-29887328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 90
               

               
Conread position:
               
215-605
               

               
Cow position:
               
chr3:26920609-26921007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 44
               

               
Conread position:
               
215-608
               

               
Cow position:
               
chr3:66375033-66375421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 76
               

               
Conread position:
               
215-611
               

               
Cow position:
               
chr3:67704252-67704649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 319
               

               
Conread position:
               
215-615
               

               
Cow position:
               
chr3:8393651-8394049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 43
               

               
Conread position:
               
215-621
               

               
Cow position:
               
chr3:7678385-7678768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 34
               

               
Conread position:
               
215-623
               

               
Cow position:
               
chr3:23111792-23111398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
129, 42
               

               
Conread position:
               
215-632
               

               
Cow position:
               
chr3:31206582-31207000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 109
               

               
Conread position:
               
215-639
               

               
Cow position:
               
chr3:73708766-73709175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 25
               

               
Conread position:
               
215-641
               

               
Cow position:
               
chr3:53592990-53592556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
215-648
               

               
Cow position:
               
chr3:72390797-72391226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
215-669
               

               
Cow position:
               
chr3:59001033-59000599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 32
               

               
Conread position:
               
215-676
               

               
Cow position:
               
chr3:74533060-74533505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 192
               

               
Conread position:
               
215-680
               

               
Cow position:
               
chr3:65968867-65969349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 32
               

               
Conread position:
               
215-681
               

               
Cow position:
               
chr3:37041141-37041592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 28
               

               
Conread position:
               
215-681
               

               
Cow position:
               
chr3:59611004-59610543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 41
               

               
Conread position:
               
215-683
               

               
Cow position:
               
chr3:26903827-26904277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 120
               

               
Conread position:
               
215-684
               

               
Cow position:
               
chr3:45881621-45882078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 109
               

               
Conread position:
               
215-684
               

               
Cow position:
               
chr3:54434686-54435147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 32
               

               
Conread position:
               
215-684
               

               
Cow position:
               
chr3:64281224-64280761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 232
               

               
Conread position:
               
215-686
               

               
Cow position:
               
chr3:7763375-7763840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 174
               

               
Conread position:
               
215-690
               

               
Cow position:
               
chr3:2506771-2506291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 245
               

               
Conread position:
               
215-691
               

               
Cow position:
               
chr3:2393254-2392781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 212
               

               
Conread position:
               
215-692
               

               
Cow position:
               
chr3:53790832-53790355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 32
               

               
Conread position:
               
215-692
               

               
Cow position:
               
chr3:71231118-71231587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 97
               

               
Conread position:
               
215-694
               

               
Cow position:
               
chr3:14552590-14553059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 107
               

               
Conread position:
               
215-694
               

               
Cow position:
               
chr3:18459808-18459349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 109
               

               
Conread position:
               
215-696
               

               
Cow position:
               
chr3:30179794-30180275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 116
               

               
Conread position:
               
215-697
               

               
Cow position:
               
chr3:2024896-2025397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 130
               

               
Conread position:
               
215-697
               

               
Cow position:
               
chr3:27274252-27274719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 49
               

               
Conread position:
               
215-697
               

               
Cow position:
               
chr3:53588678-53588196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 91
               

               
Conread position:
               
216-421
               

               
Cow position:
               
chr3:61467322-61467524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
129, 21
               

               
Conread position:
               
216-443
               

               
Cow position:
               
chr3:3164783-3164556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
158, 119
               

               
Conread position:
               
216-461
               

               
Cow position:
               
chr3:26894381-26894617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 30
               

               
Conread position:
               
216-494
               

               
Cow position:
               
chr3:77227031-77227311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
128, 234
               

               
Conread position:
               
216-531
               

               
Cow position:
               
chr3:42177873-42178180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 25
               

               
Conread position:
               
216-599
               

               
Cow position:
               
chr3:66292465-66292085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
216-600
               

               
Cow position:
               
chr3:36672292-36671903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 237
               

               
Conread position:
               
216-601
               

               
Cow position:
               
chr3:34270644-34271007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 31
               

               
Conread position:
               
216-605
               

               
Cow position:
               
chr3:4049926-4050290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 30
               

               
Conread position:
               
216-612
               

               
Cow position:
               
chr3:49650093-49650491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 31
               

               
Conread position:
               
216-617
               

               
Cow position:
               
chr3:73443374-73442987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 112
               

               
Conread position:
               
216-673
               

               
Cow position:
               
chr3:82056403-82055960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 10
               

               
Conread position:
               
216-684
               

               
Cow position:
               
chr3:67929553-67929078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 59
               

               
Conread position:
               
216-692
               

               
Cow position:
               
chr3:28908482-28908030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 96
               

               
Conread position:
               
216-695
               

               
Cow position:
               
chr3:53384570-53384085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 83
               

               
Conread position:
               
216-696
               

               
Cow position:
               
chr3:18066847-18067319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 125
               

               
Conread position:
               
216-697
               

               
Cow position:
               
chr3:61225022-61224557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 96
               

               
Conread position:
               
216-697
               

               
Cow position:
               
chr3:79902216-79902691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 108
               

               
Conread position:
               
217-617
               

               
Cow position:
               
chr3:49382666-49383057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 111
               

               
Conread position:
               
217-626
               

               
Cow position:
               
chr3:64172159-64172558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 77
               

               
Conread position:
               
217-627
               

               
Cow position:
               
chr3:17935209-17934818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 88
               

               
Conread position:
               
217-634
               

               
Cow position:
               
chr3:45647851-45648257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 107
               

               
Conread position:
               
217-679
               

               
Cow position:
               
chr3:20802915-20802466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 30
               

               
Conread position:
               
217-685
               

               
Cow position:
               
chr3:75570727-75570266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 30
               

               
Conread position:
               
218-463
               

               
Cow position:
               
chr3:41718104-41718352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
218-466
               

               
Cow position:
               
chr3:59205956-59206207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
124, 29
               

               
Conread position:
               
218-494
               

               
Cow position:
               
chr3:19789404-19789128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 131
               

               
Conread position:
               
218-588
               

               
Cow position:
               
chr3:61840004-61840355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 87
               

               
Conread position:
               
218-609
               

               
Cow position:
               
chr3:48296426-48296799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
218-618
               

               
Cow position:
               
chr3:61278621-61279018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 234
               

               
Conread position:
               
218-639
               

               
Cow position:
               
chr3:12712208-12711783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 242
               

               
Conread position:
               
218-680
               

               
Cow position:
               
chr3:54903288-54903742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
218-682
               

               
Cow position:
               
chr3:49461222-49460747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 234
               

               
Conread position:
               
218-684
               

               
Cow position:
               
chr3:49327659-49328112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 43
               

               
Conread position:
               
218-697
               

               
Cow position:
               
chr3:65058417-65058891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 29
               

               
Conread position:
               
219-418
               

               
Cow position:
               
chr3:34392380-34392183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 28
               

               
Conread position:
               
219-437
               

               
Cow position:
               
chr3:16810075-16809852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
219-507
               

               
Cow position:
               
chr3:74409211-74409485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 28
               

               
Conread position:
               
219-541
               

               
Cow position:
               
chr3:43528521-43528199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
117, 93
               

               
Conread position:
               
219-620
               

               
Cow position:
               
chr3:59691620-59692000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 93
               

               
Conread position:
               
219-668
               

               
Cow position:
               
chr3:53046941-53046495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 93
               

               
Conread position:
               
220-454
               

               
Cow position:
               
chr3:42367772-42367552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
150, 51
               

               
Conread position:
               
220-645
               

               
Cow position:
               
chr3:74600834-74601245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 87
               

               
Conread position:
               
220-693
               

               
Cow position:
               
chr3:57763940-57764400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 226
               

               
Conread position:
               
221-687
               

               
Cow position:
               
chr3:37486065-37485615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
86, 60
               

               
Conread position:
               
222-533
               

               
Cow position:
               
chr3:5416512-5416194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 203
               

               
Conread position:
               
222-680
               

               
Cow position:
               
chr3:73394838-73395290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 19
               

               
Conread position:
               
222-695
               

               
Cow position:
               
chr3:26065720-26066177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 229
               

               
Conread position:
               
224-693
               

               
Cow position:
               
chr3:7331399-7330950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 221
               

               
Conread position:
               
225-416
               

               
Cow position:
               
chr3:65020056-65020248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
225-434
               

               
Cow position:
               
chr3:58383690-58383896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 87
               

               
Conread position:
               
225-438
               

               
Cow position:
               
chr3:35511510-35511716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
138, 32
               

               
Conread position:
               
225-442
               

               
Cow position:
               
chr3:42588071-42588295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 112
               

               
Conread position:
               
225-445
               

               
Cow position:
               
chr3:22872330-22872106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 87
               

               
Conread position:
               
225-445
               

               
Cow position:
               
chr3:25691471-25691695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
225-452
               

               
Cow position:
               
chr3:73777000-73777232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
115, 48
               

               
Conread position:
               
225-479
               

               
Cow position:
               
chr3:61191195-61190953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
205, 82
               

               
Conread position:
               
225-487
               

               
Cow position:
               
chr3:49731915-49731660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 22
               

               
Conread position:
               
225-489
               

               
Cow position:
               
chr3:364497-364231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
119, 205
               

               
Conread position:
               
225-500
               

               
Cow position:
               
chr3:77496539-77496821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 207
               

               
Conread position:
               
225-532
               

               
Cow position:
               
chr3:27544607-27544317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
128, 87
               

               
Conread position:
               
225-551
               

               
Cow position:
               
chr3:46350378-46350714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 227
               

               
Conread position:
               
225-560
               

               
Cow position:
               
chr3:19708377-19708055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 22
               

               
Conread position:
               
225-579
               

               
Cow position:
               
chr3:26553986-26553644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
225-581
               

               
Cow position:
               
chr3:75711041-75711379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
225-583
               

               
Cow position:
               
chr3:68583280-68582925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 22
               

               
Conread position:
               
225-591
               

               
Cow position:
               
chr3:59798976-59799331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 87
               

               
Conread position:
               
225-597
               

               
Cow position:
               
chr3:26493502-26493142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
225-601
               

               
Cow position:
               
chr3:26219339-26218960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 29
               

               
Conread position:
               
225-602
               

               
Cow position:
               
chr3:45647399-45647774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
225-602
               

               
Cow position:
               
chr3:79094348-79093949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 100
               

               
Conread position:
               
225-604
               

               
Cow position:
               
chr3:59208536-59208890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 92
               

               
Conread position:
               
225-605
               

               
Cow position:
               
chr3:29360413-29360054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
86, 21
               

               
Conread position:
               
225-608
               

               
Cow position:
               
chr3:70401625-70401996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 22
               

               
Conread position:
               
225-611
               

               
Cow position:
               
chr3:80581393-80581758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 101
               

               
Conread position:
               
225-618
               

               
Cow position:
               
chr3:52863461-52863073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 22
               

               
Conread position:
               
225-626
               

               
Cow position:
               
chr3:36100550-36100952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 206
               

               
Conread position:
               
225-633
               

               
Cow position:
               
chr3:82460905-82461298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
225-641
               

               
Cow position:
               
chr3:68627953-68627557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 87
               

               
Conread position:
               
225-651
               

               
Cow position:
               
chr3:12255202-12255622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
113, 63
               

               
Conread position:
               
225-668
               

               
Cow position:
               
chr3:66901020-66900564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 99
               

               
Conread position:
               
225-669
               

               
Cow position:
               
chr3:18497747-18498179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
144, 22
               

               
Conread position:
               
225-669
               

               
Cow position:
               
chr3:78443841-78443403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
120, 186
               

               
Conread position:
               
225-680
               

               
Cow position:
               
chr3:55190028-55189575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
225-681
               

               
Cow position:
               
chr3:32584880-32585329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 109
               

               
Conread position:
               
225-681
               

               
Cow position:
               
chr3:69750979-69750559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
225-684
               

               
Cow position:
               
chr3:2397061-2396616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 197
               

               
Conread position:
               
225-684
               

               
Cow position:
               
chr3:2630520-2630939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 91
               

               
Conread position:
               
225-684
               

               
Cow position:
               
chr3:77365572-77365113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
225-691
               

               
Cow position:
               
chr3:80564685-80565138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 18
               

               
Conread position:
               
225-692
               

               
Cow position:
               
chr3:54782290-54781807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
225-692
               

               
Cow position:
               
chr3:75479734-75480185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 88
               

               
Conread position:
               
225-693
               

               
Cow position:
               
chr3:49482982-49482524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 22
               

               
Conread position:
               
225-695
               

               
Cow position:
               
chr3:26682071-26681632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
225-695
               

               
Cow position:
               
chr3:31225171-31225613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 120
               

               
Conread position:
               
225-695
               

               
Cow position:
               
chr3:67744906-67744451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 171
               

               
Conread position:
               
225-696
               

               
Cow position:
               
chr3:74233922-74234372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
225-697
               

               
Cow position:
               
chr3:3032120-3032600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 22
               

               
Conread position:
               
226-425
               

               
Cow position:
               
chr3:16004263-16004069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
119, 81
               

               
Conread position:
               
226-438
               

               
Cow position:
               
chr3:4223038-4223247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
226-494
               

               
Cow position:
               
chr3:30701045-30701296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
77, 100
               

               
Conread position:
               
226-569
               

               
Cow position:
               
chr3:75057391-75057075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
227, 26
               

               
Conread position:
               
226-596
               

               
Cow position:
               
chr3:83816070-83815700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 135
               

               
Conread position:
               
226-605
               

               
Cow position:
               
chr3:3738214-3738578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 21
               

               
Conread position:
               
226-680
               

               
Cow position:
               
chr3:17937116-17936672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 170
               

               
Conread position:
               
226-687
               

               
Cow position:
               
chr3:23408619-23408182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 21
               

               
Conread position:
               
227-403
               

               
Cow position:
               
chr3:61262527-61262703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
117, 85
               

               
Conread position:
               
227-442
               

               
Cow position:
               
chr3:51227879-51228108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 212
               

               
Conread position:
               
227-442
               

               
Cow position:
               
chr3:81473728-81473948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
227-461
               

               
Cow position:
               
chr3:51255508-51255744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
52, 199
               

               
Conread position:
               
227-478
               

               
Cow position:
               
chr3:5899550-5899795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
199, 20
               

               
Conread position:
               
227-571
               

               
Cow position:
               
chr3:52722273-52721946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
113, 44
               

               
Conread position:
               
227-604
               

               
Cow position:
               
chr3:6873521-6873154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 76
               

               
Conread position:
               
227-606
               

               
Cow position:
               
chr3:38691681-38691308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 20
               

               
Conread position:
               
227-614
               

               
Cow position:
               
chr3:46900919-46901304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 20
               

               
Conread position:
               
227-618
               

               
Cow position:
               
chr3:50069503-50069875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 76
               

               
Conread position:
               
227-626
               

               
Cow position:
               
chr3:73764469-73764079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 30
               

               
Conread position:
               
227-671
               

               
Cow position:
               
chr3:74499948-74500423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 399
               

               
Conread position:
               
227-687
               

               
Cow position:
               
chr3:31419425-31419877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 109
               

               
Conread position:
               
227-697
               

               
Cow position:
               
chr3:38863837-38864310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 112
               

               
Conread position:
               
228-446
               

               
Cow position:
               
chr3:30055718-30055505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
114, 10
               

               
Conread position:
               
228-506
               

               
Cow position:
               
chr3:31907424-31907140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
29, 147
               

               
Conread position:
               
228-676
               

               
Cow position:
               
chr3:61169508-61169981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
78, 156
               

               
Conread position:
               
228-684
               

               
Cow position:
               
chr3:75050895-75050444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 104
               

               
Conread position:
               
228-685
               

               
Cow position:
               
chr3:15052212-15051772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 28
               

               
Conread position:
               
228-696
               

               
Cow position:
               
chr3:29812969-29813418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
365, 22
               

               
Conread position:
               
228-697
               

               
Cow position:
               
chr3:15229094-15228651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 102
               

               
Conread position:
               
229-442
               

               
Cow position:
               
chr3:6853774-6853567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
136, 18
               

               
Conread position:
               
229-599
               

               
Cow position:
               
chr3:49140321-49139945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
229-639
               

               
Cow position:
               
chr3:75046144-75045742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 25
               

               
Conread position:
               
229-697
               

               
Cow position:
               
chr3:14801477-14801939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
75, 92
               

               
Conread position:
               
229-697
               

               
Cow position:
               
chr3:54945851-54946313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 28
               

               
Conread position:
               
230-516
               

               
Cow position:
               
chr3:79208276-79207976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 177
               

               
Conread position:
               
230-596
               

               
Cow position:
               
chr3:525081-525434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 82
               

               
Conread position:
               
230-696
               

               
Cow position:
               
chr3:31309628-31309167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 90
               

               
Conread position:
               
231-468
               

               
Cow position:
               
chr3:8923773-8924009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
231-680
               

               
Cow position:
               
chr3:51578593-51578149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 91
               

               
Conread position:
               
233-438
               

               
Cow position:
               
chr3:12323795-12324008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
90, 56
               

               
Conread position:
               
233-484
               

               
Cow position:
               
chr3:2903560-2903317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
112, 91
               

               
Conread position:
               
233-484
               

               
Cow position:
               
chr3:35283367-35283113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 14
               

               
Conread position:
               
233-505
               

               
Cow position:
               
chr3:84000342-84000611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 97
               

               
Conread position:
               
233-618
               

               
Cow position:
               
chr3:16255071-16254731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
233-641
               

               
Cow position:
               
chr3:45279187-45279599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
45, 37
               

               
Conread position:
               
233-651
               

               
Cow position:
               
chr3:70899630-70900032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
233-697
               

               
Cow position:
               
chr3:13302126-13301655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 213
               

               
Conread position:
               
234-690
               

               
Cow position:
               
chr3:14633255-14632795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 13
               

               
Conread position:
               
236-421
               

               
Cow position:
               
chr3:59701746-59701926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
130, 76
               

               
Conread position:
               
237-483
               

               
Cow position:
               
chr3:49454969-49455213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
106, 190
               

               
Conread position:
               
238-428
               

               
Cow position:
               
chr3:55970960-55971149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
106, 101
               

               
Conread position:
               
238-614
               

               
Cow position:
               
chr3:67544139-67543764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
66, 214
               

               
Conread position:
               
238-615
               

               
Cow position:
               
chr3:61143829-61144201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 9
               

               
Conread position:
               
238-618
               

               
Cow position:
               
chr3:49230746-49231109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
107, 9
               

               
Conread position:
               
238-676
               

               
Cow position:
               
chr3:60597283-60597708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 61
               

               
Conread position:
               
238-680
               

               
Cow position:
               
chr3:80740309-80740728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 13
               

               
Conread position:
               
241-446
               

               
Cow position:
               
chr3:54881494-54881702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
103, 71
               

               
Conread position:
               
242-462
               

               
Cow position:
               
chr3:81401568-81401348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
15, 121
               

               
Conread position:
               
243-489
               

               
Cow position:
               
chr3:73590258-73590013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
243-587
               

               
Cow position:
               
chr3:58969156-58968824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 66
               

               
Conread position:
               
243-688
               

               
Cow position:
               
chr3:51234356-51233921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 93
               

               
Conread position:
               
243-696
               

               
Cow position:
               
chr3:75080506-75080942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 161
               

               
Conread position:
               
243-697
               

               
Cow position:
               
chr3:18393644-18393211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 74
               

               
Conread position:
               
244-441
               

               
Cow position:
               
chr3:18557925-18558108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
244-512
               

               
Cow position:
               
chr3:16362998-16362730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
11, 202
               

               
Conread position:
               
244-523
               

               
Cow position:
               
chr3:14625647-14625374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
244-627
               

               
Cow position:
               
chr3:52017498-52017888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 216
               

               
Conread position:
               
244-682
               

               
Cow position:
               
chr3:52607924-52608358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 166
               

               
Conread position:
               
244-684
               

               
Cow position:
               
chr3:59473853-59474299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 172
               

               
Conread position:
               
244-684
               

               
Cow position:
               
chr3:83455411-83454978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 129
               

               
Conread position:
               
244-692
               

               
Cow position:
               
chr3:33253140-33252706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 78
               

               
Conread position:
               
244-693
               

               
Cow position:
               
chr3:7338033-7337597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 147
               

               
Conread position:
               
244-693
               

               
Cow position:
               
chr3:82020103-82019654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 139
               

               
Conread position:
               
245-421
               

               
Cow position:
               
chr3:23269844-23270015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
126, 70
               

               
Conread position:
               
246-626
               

               
Cow position:
               
chr3:18725891-18725526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
88, 18
               

               
Conread position:
               
247-446
               

               
Cow position:
               
chr3:11422491-11422685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
247-487
               

               
Cow position:
               
chr3:4087422-4087180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
95, 77
               

               
Conread position:
               
247-490
               

               
Cow position:
               
chr3:8604270-8604036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
95, 65
               

               
Conread position:
               
247-505
               

               
Cow position:
               
chr3:28692686-28692431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 69
               

               
Conread position:
               
247-541
               

               
Cow position:
               
chr3:61171766-61171475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
123, 97
               

               
Conread position:
               
247-551
               

               
Cow position:
               
chr3:22820313-22820614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 64
               

               
Conread position:
               
247-615
               

               
Cow position:
               
chr3:2680255-2680620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 198
               

               
Conread position:
               
247-615
               

               
Cow position:
               
chr3:73460722-73461073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 92
               

               
Conread position:
               
247-625
               

               
Cow position:
               
chr3:50614383-50614758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 88
               

               
Conread position:
               
247-678
               

               
Cow position:
               
chr3:71237901-71238322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
247-686
               

               
Cow position:
               
chr3:22716536-22716096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 60
               

               
Conread position:
               
247-694
               

               
Cow position:
               
chr3:18686660-18687092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 69
               

               
Conread position:
               
247-695
               

               
Cow position:
               
chr3:74088430-74087982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 160
               

               
Conread position:
               
247-696
               

               
Cow position:
               
chr3:3556288-3556742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
248-488
               

               
Cow position:
               
chr3:52650788-52650548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
97, 77
               

               
Conread position:
               
248-676
               

               
Cow position:
               
chr3:26970570-26970982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 66
               

               
Conread position:
               
248-685
               

               
Cow position:
               
chr3:48578586-48579004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
204, 41
               

               
Conread position:
               
249-536
               

               
Cow position:
               
chr3:41328201-41328471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
276, 75
               

               
Conread position:
               
250-414
               

               
Cow position:
               
chr3:12563226-12563388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
250-680
               

               
Cow position:
               
chr3:5045063-5044635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 179
               

               
Conread position:
               
251-457
               

               
Cow position:
               
chr3:61361150-61361359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
251-600
               

               
Cow position:
               
chr3:25754784-25755112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 93
               

               
Conread position:
               
251-676
               

               
Cow position:
               
chr3:8060880-8061291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 58
               

               
Conread position:
               
252-598
               

               
Cow position:
               
chr3:11711702-11712055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 29
               

               
Conread position:
               
252-626
               

               
Cow position:
               
chr3:42584291-42584655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
92, 129
               

               
Conread position:
               
253-697
               

               
Cow position:
               
chr3:15752878-15752444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 60
               

               
Conread position:
               
254-445
               

               
Cow position:
               
chr3:44535016-44534819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
255-487
               

               
Cow position:
               
chr3:59271303-59271522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
257-539
               

               
Cow position:
               
chr3:55947329-55947616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 173
               

               
Conread position:
               
257-579
               

               
Cow position:
               
chr3:23445136-23444817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 69
               

               
Conread position:
               
257-608
               

               
Cow position:
               
chr3:115961-116290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 20
               

               
Conread position:
               
257-611
               

               
Cow position:
               
chr3:55836075-55835717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 200
               

               
Conread position:
               
257-680
               

               
Cow position:
               
chr3:43233257-43233678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 172
               

               
Conread position:
               
259-423
               

               
Cow position:
               
chr3:35074437-35074602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
85, 39
               

               
Conread position:
               
259-606
               

               
Cow position:
               
chr3:58767035-58767361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
184, 57
               

               
Conread position:
               
259-680
               

               
Cow position:
               
chr3:44932264-44932687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 277
               

               
Conread position:
               
259-685
               

               
Cow position:
               
chr3:77006261-77006675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
274, 65
               

               
Conread position:
               
259-695
               

               
Cow position:
               
chr3:17134095-17134520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
129, 80
               

               
Conread position:
               
263-435
               

               
Cow position:
               
chr3:29334754-29334580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
80, 59
               

               
Conread position:
               
263-584
               

               
Cow position:
               
chr3:76015059-76015368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
101, 49
               

               
Conread position:
               
263-615
               

               
Cow position:
               
chr3:8733579-8733252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
107, 49
               

               
Conread position:
               
264-562
               

               
Cow position:
               
chr3:34937601-34937898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 60
               

               
Conread position:
               
265-421
               

               
Cow position:
               
chr3:4861451-4861604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
79, 59
               

               
Conread position:
               
265-442
               

               
Cow position:
               
chr3:71135550-71135731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 164
               

               
Conread position:
               
265-468
               

               
Cow position:
               
chr3:43657949-43657744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 111
               

               
Conread position:
               
265-483
               

               
Cow position:
               
chr3:59885135-59885368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
265-530
               

               
Cow position:
               
chr3:83201766-83201501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 158
               

               
Conread position:
               
265-639
               

               
Cow position:
               
chr3:70334939-70334564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 12
               

               
Conread position:
               
265-684
               

               
Cow position:
               
chr3:22232881-22232489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
265-685
               

               
Cow position:
               
chr3:12705797-12705368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 186
               

               
Conread position:
               
265-697
               

               
Cow position:
               
chr3:39661688-39661256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
77, 44
               

               
Conread position:
               
266-618
               

               
Cow position:
               
chr3:13507226-13507578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 138
               

               
Conread position:
               
266-619
               

               
Cow position:
               
chr3:27940365-27940029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 43
               

               
Conread position:
               
267-412
               

               
Cow position:
               
chr3:79196614-79196472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
65, 72
               

               
Conread position:
               
267-603
               

               
Cow position:
               
chr3:18217002-18216668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
77, 105
               

               
Conread position:
               
268-417
               

               
Cow position:
               
chr3:78067373-78067220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
268-618
               

               
Cow position:
               
chr3:17447843-17447505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 56
               

               
Conread position:
               
268-680
               

               
Cow position:
               
chr3:188624-189050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
74, 61
               

               
Conread position:
               
269-602
               

               
Cow position:
               
chr3:15192329-15192674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
7, 62
               

               
Conread position:
               
269-696
               

               
Cow position:
               
chr3:68156496-68156918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 112
               

               
Conread position:
               
270-532
               

               
Cow position:
               
chr3:55106676-55106414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
75, 160
               

               
Conread position:
               
270-680
               

               
Cow position:
               
chr3:67930411-67929995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
271-691
               

               
Cow position:
               
chr3:81087842-81087456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
95, 51
               

               
Conread position:
               
272-697
               

               
Cow position:
               
chr3:78092740-78092318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
273-607
               

               
Cow position:
               
chr3:19404093-19404397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
225, 53
               

               
Conread position:
               
274-615
               

               
Cow position:
               
chr3:59621865-59621541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
221, 14
               

               
Conread position:
               
275-442
               

               
Cow position:
               
chr3:23215812-23215634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
275-463
               

               
Cow position:
               
chr3:53836913-53836727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
275-697
               

               
Cow position:
               
chr3:68146064-68145663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 37
               

               
Conread position:
               
276-617
               

               
Cow position:
               
chr3:15506220-15506556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 135
               

               
Conread position:
               
277-599
               

               
Cow position:
               
chr3:26960821-26960497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 168
               

               
Conread position:
               
277-696
               

               
Cow position:
               
chr3:53240047-53240456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
255, 20
               

               
Conread position:
               
278-464
               

               
Cow position:
               
chr3:12576539-12576341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 159
               

               
Conread position:
               
278-553
               

               
Cow position:
               
chr3:56301573-56301313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 156
               

               
Conread position:
               
278-647
               

               
Cow position:
               
chr3:74134480-74134844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
278-693
               

               
Cow position:
               
chr3:22734500-22734074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
100, 54
               

               
Conread position:
               
279-695
               

               
Cow position:
               
chr3:74754105-74754504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 30
               

               
Conread position:
               
280-436
               

               
Cow position:
               
chr3:6772821-6772660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
280-611
               

               
Cow position:
               
chr3:60265459-60265151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 44
               

               
Conread position:
               
281-626
               

               
Cow position:
               
chr3:2198660-2199000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
281-684
               

               
Cow position:
               
chr3:83215031-83215448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
282-664
               

               
Cow position:
               
chr3:16656702-16656326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
62, 111
               

               
Conread position:
               
282-686
               

               
Cow position:
               
chr3:11063157-11063543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 132
               

               
Conread position:
               
283-506
               

               
Cow position:
               
chr3:15859891-15859667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
60, 111
               

               
Conread position:
               
285-694
               

               
Cow position:
               
chr3:6182422-6182044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 24
               

               
Conread position:
               
285-697
               

               
Cow position:
               
chr3:67698061-67698472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
286-440
               

               
Cow position:
               
chr3:23265512-23265358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
58, 38
               

               
Conread position:
               
286-591
               

               
Cow position:
               
chr3:83845687-83845995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
286-656
               

               
Cow position:
               
chr3:25944860-25945245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 144
               

               
Conread position:
               
287-529
               

               
Cow position:
               
chr3:35005561-35005798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
57, 83
               

               
Conread position:
               
287-697
               

               
Cow position:
               
chr3:4319494-4319912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 105
               

               
Conread position:
               
287-697
               

               
Cow position:
               
chr3:23105582-23105175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
288-410
               

               
Cow position:
               
chr3:5082857-5082732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
288-571
               

               
Cow position:
               
chr3:78896433-78896710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
288-680
               

               
Cow position:
               
chr3:70609407-70609800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 119
               

               
Conread position:
               
288-684
               

               
Cow position:
               
chr3:76713537-76713133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
289-487
               

               
Cow position:
               
chr3:3062348-3062547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
289-489
               

               
Cow position:
               
chr3:25059859-25060061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 162
               

               
Conread position:
               
289-539
               

               
Cow position:
               
chr3:39328186-39328432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
289-697
               

               
Cow position:
               
chr3:20842074-20841687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
59, 106
               

               
Conread position:
               
290-511
               

               
Cow position:
               
chr3:21693728-21693955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
51, 141
               

               
Conread position:
               
290-579
               

               
Cow position:
               
chr3:10896615-10896893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
54, 84
               

               
Conread position:
               
291-695
               

               
Cow position:
               
chr3:36375760-36375346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 123
               

               
Conread position:
               
295-685
               

               
Cow position:
               
chr3:76268189-76267793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 11
               

               
Conread position:
               
296-577
               

               
Cow position:
               
chr3:34556449-34556173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
48, 95
               

               
Conread position:
               
296-678
               

               
Cow position:
               
chr3:77581900-77582279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
296-684
               

               
Cow position:
               
chr3:67520387-67519997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
46, 58
               

               
Conread position:
               
297-680
               

               
Cow position:
               
chr3:27697189-27696789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
46, 147
               

               
Conread position:
               
298-617
               

               
Cow position:
               
chr3:57760293-57760607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
45, 24
               

               
Conread position:
               
298-697
               

               
Cow position:
               
chr3:55712220-55712625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 245
               

               
Conread position:
               
301-582
               

               
Cow position:
               
chr3:7940758-7940483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
155, 28
               

               
Conread position:
               
301-583
               

               
Cow position:
               
chr3:3637980-3638253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
43, 150
               

               
Conread position:
               
302-400
               

               
Cow position:
               
chr3:14801035-14800934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
302-464
               

               
Cow position:
               
chr3:18757978-18757813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
42, 84
               

               
Conread position:
               
302-686
               

               
Cow position:
               
chr3:14598745-14599101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 104
               

               
Conread position:
               
304-680
               

               
Cow position:
               
chr3:38828563-38828926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 138
               

               
Conread position:
               
305-623
               

               
Cow position:
               
chr3:49791011-49790695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
305-624
               

               
Cow position:
               
chr3:53095138-53094815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
39, 125
               

               
Conread position:
               
308-696
               

               
Cow position:
               
chr3:38035791-38035400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
42, 145
               

               
Conread position:
               
308-697
               

               
Cow position:
               
chr3:53875958-53875570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
36, 97
               

               
Conread position:
               
309-482
               

               
Cow position:
               
chr3:65380955-65381124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 106
               

               
Conread position:
               
309-530
               

               
Cow position:
               
chr3:77665974-77665747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
309-610
               

               
Cow position:
               
chr3:20678032-20677740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
309-611
               

               
Cow position:
               
chr3:59884271-59883965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 148
               

               
Conread position:
               
310-459
               

               
Cow position:
               
chr3:20779935-20779794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
310-554
               

               
Cow position:
               
chr3:34294478-34294222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
171, 22
               

               
Conread position:
               
312-469
               

               
Cow position:
               
chr3:38078270-38078424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
57, 46
               

               
Conread position:
               
312-538
               

               
Cow position:
               
chr3:70631823-70632051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
312-668
               

               
Cow position:
               
chr3:74079834-74079475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 139
               

               
Conread position:
               
312-684
               

               
Cow position:
               
chr3:30940625-30940984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 32
               

               
Conread position:
               
312-684
               

               
Cow position:
               
chr3:54100913-54100534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
42, 32
               

               
Conread position:
               
312-697
               

               
Cow position:
               
chr3:55319098-55318705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 77
               

               
Conread position:
               
313-474
               

               
Cow position:
               
chr3:78739667-78739822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
313-543
               

               
Cow position:
               
chr3:36446911-36446683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
313-615
               

               
Cow position:
               
chr3:66884135-66883836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
31, 127
               

               
Conread position:
               
313-684
               

               
Cow position:
               
chr3:57273872-57274238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
313-697
               

               
Cow position:
               
chr3:75853523-75853146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
314-641
               

               
Cow position:
               
chr3:13890274-13890610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 121
               

               
Conread position:
               
316-610
               

               
Cow position:
               
chr3:63269034-63269323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
316-681
               

               
Cow position:
               
chr3:54374052-54373681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
29, 130
               

               
Conread position:
               
317-684
               

               
Cow position:
               
chr3:59596995-59597352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 126
               

               
Conread position:
               
317-695
               

               
Cow position:
               
chr3:55434141-55434523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 36
               

               
Conread position:
               
319-629
               

               
Cow position:
               
chr3:61322660-61322961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
156, 64
               

               
Conread position:
               
321-697
               

               
Cow position:
               
chr3:53318217-53318603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
23, 130
               

               
Conread position:
               
322-589
               

               
Cow position:
               
chr3:74502507-74502244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 103
               

               
Conread position:
               
322-626
               

               
Cow position:
               
chr3:24352680-24352976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
175, 23
               

               
Conread position:
               
322-668
               

               
Cow position:
               
chr3:19793775-19793427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
322-695
               

               
Cow position:
               
chr3:75687624-75687246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
20, 129
               

               
Conread position:
               
322-696
               

               
Cow position:
               
chr3:19198802-19199180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
322-697
               

               
Cow position:
               
chr3:24872534-24872885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
321, 17
               

               
Conread position:
               
323-557
               

               
Cow position:
               
chr3:79092579-79092343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 122
               

               
Conread position:
               
323-683
               

               
Cow position:
               
chr3:15751906-15751545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
323-694
               

               
Cow position:
               
chr3:54506525-54506896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
324-695
               

               
Cow position:
               
chr3:59718659-59719038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
26, 179
               

               
Conread position:
               
326-448
               

               
Cow position:
               
chr3:16891117-16891244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
326-594
               

               
Cow position:
               
chr3:34669909-34669647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 125
               

               
Conread position:
               
326-697
               

               
Cow position:
               
chr3:26981883-26982241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 104
               

               
Conread position:
               
328-567
               

               
Cow position:
               
chr3:81359292-81359048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 108
               

               
Conread position:
               
328-678
               

               
Cow position:
               
chr3:76922842-76922500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 126
               

               
Conread position:
               
328-694
               

               
Cow position:
               
chr3:70762302-70761934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 113
               

               
Conread position:
               
329-524
               

               
Cow position:
               
chr3:15992541-15992735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
162, 10
               

               
Conread position:
               
329-684
               

               
Cow position:
               
chr3:36418644-36418308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
330-509
               

               
Cow position:
               
chr3:53192596-53192424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
165, 48
               

               
Conread position:
               
330-694
               

               
Cow position:
               
chr3:81039921-81039558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
22, 111
               

               
Conread position:
               
330-697
               

               
Cow position:
               
chr3:62046485-62046864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 76
               

               
Conread position:
               
331-697
               

               
Cow position:
               
chr3:19792716-19793087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 217
               

               
Conread position:
               
332-696
               

               
Cow position:
               
chr3:59034861-59035231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
38, 113
               

               
Conread position:
               
332-697
               

               
Cow position:
               
chr3:26489259-26488883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
8, 111
               

               
Conread position:
               
338-621
               

               
Cow position:
               
chr3:53508455-53508724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 76
               

               
Conread position:
               
341-589
               

               
Cow position:
               
chr3:55109778-55109532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 8
               

               
Conread position:
               
341-599
               

               
Cow position:
               
chr3:31850533-31850286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
341-610
               

               
Cow position:
               
chr3:30222022-30222292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
23, 108
               

               
Conread position:
               
341-615
               

               
Cow position:
               
chr3:26874427-26874698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 7
               

               
Conread position:
               
341-671
               

               
Cow position:
               
chr3:12978780-12978449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
26, 107
               

               
Conread position:
               
341-675
               

               
Cow position:
               
chr3:27109064-27108717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
106, 51
               

               
Conread position:
               
341-678
               

               
Cow position:
               
chr3:48810800-48810465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 56
               

               
Conread position:
               
341-684
               

               
Cow position:
               
chr3:48073037-48072707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 47
               

               
Conread position:
               
341-685
               

               
Cow position:
               
chr3:55819584-55819930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 104
               

               
Conread position:
               
342-489
               

               
Cow position:
               
chr3:27247351-27247208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
342-591
               

               
Cow position:
               
chr3:73915966-73915725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
61, 103
               

               
Conread position:
               
342-678
               

               
Cow position:
               
chr3:68616487-68616162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 56
               

               
Conread position:
               
342-684
               

               
Cow position:
               
chr3:58765239-58764907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
155, 33
               

               
Conread position:
               
343-676
               

               
Cow position:
               
chr3:24615998-24615671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
154, 25
               

               
Conread position:
               
343-679
               

               
Cow position:
               
chr3:35153460-35153780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
152, 40
               

               
Conread position:
               
343-696
               

               
Cow position:
               
chr3:60264876-60264531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 25
               

               
Conread position:
               
343-697
               

               
Cow position:
               
chr3:3913612-3913247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
26, 117
               

               
Conread position:
               
344-519
               

               
Cow position:
               
chr3:9638531-9638361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
8, 29
               

               
Conread position:
               
344-617
               

               
Cow position:
               
chr3:74242835-74243101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
136, 60
               

               
Conread position:
               
345-441
               

               
Cow position:
               
chr3:18056284-18056380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
345-633
               

               
Cow position:
               
chr3:79645603-79645305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
24, 127
               

               
Conread position:
               
346-680
               

               
Cow position:
               
chr3:15153534-15153863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
104, 54
               

               
Conread position:
               
347-693
               

               
Cow position:
               
chr3:24468536-24468196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 103
               

               
Conread position:
               
347-696
               

               
Cow position:
               
chr3:19585704-19586055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 92
               

               
Conread position:
               
348-541
               

               
Cow position:
               
chr3:32184177-32183985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
112, 91
               

               
Conread position:
               
348-680
               

               
Cow position:
               
chr3:58527241-58527552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
349-611
               

               
Cow position:
               
chr3:24935215-24935467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
146, 85
               

               
Conread position:
               
349-692
               

               
Cow position:
               
chr3:71478436-71478779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
350-687
               

               
Cow position:
               
chr3:2648668-2648327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
351-588
               

               
Cow position:
               
chr3:46541981-46541749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
143, 74
               

               
Conread position:
               
352-684
               

               
Cow position:
               
chr3:70334117-70333790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
12, 97
               

               
Conread position:
               
352-686
               

               
Cow position:
               
chr3:55177905-55177570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
355-669
               

               
Cow position:
               
chr3:79196610-79196927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 65
               

               
Conread position:
               
355-684
               

               
Cow position:
               
chr3:22221170-22221505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
356-669
               

               
Cow position:
               
chr3:61323185-61323489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
139, 56
               

               
Conread position:
               
357-624
               

               
Cow position:
               
chr3:5366623-5366884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
138, 87
               

               
Conread position:
               
358-684
               

               
Cow position:
               
chr3:3883965-3883641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 81
               

               
Conread position:
               
360-626
               

               
Cow position:
               
chr3:20993667-20993931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
134, 65
               

               
Conread position:
               
360-680
               

               
Cow position:
               
chr3:35056125-35055801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 86
               

               
Conread position:
               
361-620
               

               
Cow position:
               
chr3:1785385-1785133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 47
               

               
Conread position:
               
363-604
               

               
Cow position:
               
chr3:73237053-73237292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
131, 39
               

               
Conread position:
               
363-629
               

               
Cow position:
               
chr3:43726936-43727196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
98, 29
               

               
Conread position:
               
363-640
               

               
Cow position:
               
chr3:73820511-73820233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
76, 55
               

               
Conread position:
               
363-649
               

               
Cow position:
               
chr3:38783475-38783747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 61
               

               
Conread position:
               
363-671
               

               
Cow position:
               
chr3:71238332-71238642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
131, 103
               

               
Conread position:
               
363-677
               

               
Cow position:
               
chr3:21015101-21014784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
363-680
               

               
Cow position:
               
chr3:17331585-17331894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 127
               

               
Conread position:
               
363-681
               

               
Cow position:
               
chr3:59040426-59040746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
132, 55
               

               
Conread position:
               
363-685
               

               
Cow position:
               
chr3:48900479-48900150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
363-686
               

               
Cow position:
               
chr3:76155846-76156167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 75
               

               
Conread position:
               
363-693
               

               
Cow position:
               
chr3:1517655-1517321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
363-693
               

               
Cow position:
               
chr3:3889708-3889389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
93, 55
               

               
Conread position:
               
363-696
               

               
Cow position:
               
chr3:15443870-15443535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 7
               

               
Conread position:
               
363-696
               

               
Cow position:
               
chr3:51033229-51033563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
132, 60
               

               
Conread position:
               
363-697
               

               
Cow position:
               
chr3:47417707-47417376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
218, 76
               

               
Conread position:
               
364-618
               

               
Cow position:
               
chr3:10103910-10104150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
131, 10
               

               
Conread position:
               
364-678
               

               
Cow position:
               
chr3:78093524-78093220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 80
               

               
Conread position:
               
364-681
               

               
Cow position:
               
chr3:74584077-74584366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
127, 48
               

               
Conread position:
               
364-687
               

               
Cow position:
               
chr3:18426840-18426515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
130, 80
               

               
Conread position:
               
365-684
               

               
Cow position:
               
chr3:17235348-17235024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
132, 27
               

               
Conread position:
               
366-611
               

               
Cow position:
               
chr3:63177339-63177585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
18, 169
               

               
Conread position:
               
366-626
               

               
Cow position:
               
chr3:74846847-74846589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
132, 9
               

               
Conread position:
               
366-697
               

               
Cow position:
               
chr3:58134827-58134490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 59
               

               
Conread position:
               
368-608
               

               
Cow position:
               
chr3:72504036-72503796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
368-620
               

               
Cow position:
               
chr3:32457064-32457305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
127, 79
               

               
Conread position:
               
368-626
               

               
Cow position:
               
chr3:61116994-61116735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
368-684
               

               
Cow position:
               
chr3:76024383-76024682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
127, 45
               

               
Conread position:
               
368-697
               

               
Cow position:
               
chr3:64526712-64527042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
127, 5
               

               
Conread position:
               
369-684
               

               
Cow position:
               
chr3:23203374-23203050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 170
               

               
Conread position:
               
370-570
               

               
Cow position:
               
chr3:12670749-12670553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
370-685
               

               
Cow position:
               
chr3:7661718-7662038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
373-611
               

               
Cow position:
               
chr3:33693686-33693922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 77
               

               
Conread position:
               
373-684
               

               
Cow position:
               
chr3:51402777-51403075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
228, 75
               

               
Conread position:
               
374-697
               

               
Cow position:
               
chr3:42796639-42796326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
269, 45
               

               
Conread position:
               
375-618
               

               
Cow position:
               
chr3:22509897-22510135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
99, 64
               

               
Conread position:
               
375-626
               

               
Cow position:
               
chr3:3649347-3649103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
236, 71
               

               
Conread position:
               
375-642
               

               
Cow position:
               
chr3:84175955-84175689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
120, 69
               

               
Conread position:
               
375-680
               

               
Cow position:
               
chr3:72342115-72342423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
120, 66
               

               
Conread position:
               
375-686
               

               
Cow position:
               
chr3:48459465-48459148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
375-687
               

               
Cow position:
               
chr3:60389638-60389935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
125, 50
               

               
Conread position:
               
376-674
               

               
Cow position:
               
chr3:73298958-73299234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
124, 71
               

               
Conread position:
               
376-676
               

               
Cow position:
               
chr3:17058669-17058376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
121, 68
               

               
Conread position:
               
376-680
               

               
Cow position:
               
chr3:14194307-14194015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
377-696
               

               
Cow position:
               
chr3:5696857-5696539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
211, 64
               

               
Conread position:
               
377-697
               

               
Cow position:
               
chr3:56678481-56678165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
77, 67
               

               
Conread position:
               
378-611
               

               
Cow position:
               
chr3:35621176-35621405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
212, 64
               

               
Conread position:
               
378-678
               

               
Cow position:
               
chr3:13380413-13380105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
64, 163
               

               
Conread position:
               
381-697
               

               
Cow position:
               
chr3:48468059-48468370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
48, 43
               

               
Conread position:
               
384-695
               

               
Cow position:
               
chr3:26992446-26992765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 40
               

               
Conread position:
               
385-694
               

               
Cow position:
               
chr3:15951031-15950731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 54
               

               
Conread position:
               
387-697
               

               
Cow position:
               
chr3:58318071-58317752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
55, 148
               

               
Conread position:
               
392-697
               

               
Cow position:
               
chr3:55094347-55094034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 33
               

               
Conread position:
               
393-692
               

               
Cow position:
               
chr3:18059590-18059893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 32
               

               
Conread position:
               
394-587
               

               
Cow position:
               
chr3:28496717-28496913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
103, 53
               

               
Conread position:
               
394-617
               

               
Cow position:
               
chr3:6520084-6519860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 8
               

               
Conread position:
               
394-692
               

               
Cow position:
               
chr3:33329703-33330019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
38, 30
               

               
Conread position:
               
396-618
               

               
Cow position:
               
chr3:55983986-55984208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
47, 59
               

               
Conread position:
               
396-695
               

               
Cow position:
               
chr3:57704214-57704521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 146
               

               
Conread position:
               
396-696
               

               
Cow position:
               
chr3:65019974-65019662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
99, 52
               

               
Conread position:
               
397-611
               

               
Cow position:
               
chr3:54290623-54290407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
34, 28
               

               
Conread position:
               
397-695
               

               
Cow position:
               
chr3:9116920-9117227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
100, 41
               

               
Conread position:
               
398-662
               

               
Cow position:
               
chr3:32409104-32409370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
99, 52
               

               
Conread position:
               
398-680
               

               
Cow position:
               
chr3:3656407-3656690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
97, 56
               

               
Conread position:
               
398-684
               

               
Cow position:
               
chr3:31361312-31361603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
97, 7
               

               
Conread position:
               
399-693
               

               
Cow position:
               
chr3:3316918-3316619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 49
               

               
Conread position:
               
399-697
               

               
Cow position:
               
chr3:22165523-22165227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
400-684
               

               
Cow position:
               
chr3:44625268-44625000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 49
               

               
Conread position:
               
401-571
               

               
Cow position:
               
chr3:46108710-46108881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
51, 136
               

               
Conread position:
               
401-668
               

               
Cow position:
               
chr3:75238354-75238623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
94, 48
               

               
Conread position:
               
402-598
               

               
Cow position:
               
chr3:51349712-51349913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
402-642
               

               
Cow position:
               
chr3:19626612-19626376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
92, 131
               

               
Conread position:
               
406-591
               

               
Cow position:
               
chr3:64135616-64135801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
88, 127
               

               
Conread position:
               
406-627
               

               
Cow position:
               
chr3:15172980-15173202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
62, 8
               

               
Conread position:
               
407-676
               

               
Cow position:
               
chr3:75608399-75608659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
87, 107
               

               
Conread position:
               
407-695
               

               
Cow position:
               
chr3:47753126-47753426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
408-587
               

               
Cow position:
               
chr3:3471941-3472119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
408-606
               

               
Cow position:
               
chr3:18607565-18607770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
409-695
               

               
Cow position:
               
chr3:75778157-75777877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
83, 35
               

               
Conread position:
               
410-694
               

               
Cow position:
               
chr3:4548920-4549205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 134
               

               
Conread position:
               
410-697
               

               
Cow position:
               
chr3:49363020-49363297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
87, 17
               

               
Conread position:
               
414-602
               

               
Cow position:
               
chr3:2067802-2067990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
415-680
               

               
Cow position:
               
chr3:69785716-69785445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
82, 35
               

               
Conread position:
               
415-681
               

               
Cow position:
               
chr3:71474498-71474231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
26, 119
               

               
Conread position:
               
415-684
               

               
Cow position:
               
chr3:31804851-31804591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
415-697
               

               
Cow position:
               
chr3:27976617-27976330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
416-618
               

               
Cow position:
               
chr3:44330527-44330327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
58, 44
               

               
Conread position:
               
416-684
               

               
Cow position:
               
chr3:31350194-31349929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
417-577
               

               
Cow position:
               
chr3:70614574-70614418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 10
               

               
Conread position:
               
418-687
               

               
Cow position:
               
chr3:90985-91257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
76, 117
               

               
Conread position:
               
418-691
               

               
Cow position:
               
chr3:19682605-19682893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
419-684
               

               
Cow position:
               
chr3:36160281-36160019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
12, 5
               

               
Conread position:
               
420-693
               

               
Cow position:
               
chr3:10591603-10591326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
74, 184
               

               
Conread position:
               
420-695
               

               
Cow position:
               
chr3:64196739-64197017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 40
               

               
Conread position:
               
423-605
               

               
Cow position:
               
chr3:3478338-3478158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
423-618
               

               
Cow position:
               
chr3:4480858-4481052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
423-696
               

               
Cow position:
               
chr3:59299494-59299764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
424-620
               

               
Cow position:
               
chr3:61467273-61467077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
426-610
               

               
Cow position:
               
chr3:54982161-54981977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
6, 27
               

               
Conread position:
               
428-675
               

               
Cow position:
               
chr3:10668956-10668709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
428-684
               

               
Cow position:
               
chr3:76269820-76270067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
213, 47
               

               
Conread position:
               
430-678
               

               
Cow position:
               
chr3:11640653-11640905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
430-685
               

               
Cow position:
               
chr3:53704041-53703767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
65, 106
               

               
Conread position:
               
430-687
               

               
Cow position:
               
chr3:48478107-48477863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
432-647
               

               
Cow position:
               
chr3:84250617-84250412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
434-615
               

               
Cow position:
               
chr3:74802139-74801959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
437-679
               

               
Cow position:
               
chr3:82629242-82629484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
7, 99
               

               
Conread position:
               
437-693
               

               
Cow position:
               
chr3:54067724-54067982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
438-680
               

               
Cow position:
               
chr3:23132238-23131993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
439-696
               

               
Cow position:
               
chr3:33002324-33002575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
117, 50
               

               
Conread position:
               
441-676
               

               
Cow position:
               
chr3:81234324-81234559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
54, 14
               

               
Conread position:
               
444-691
               

               
Cow position:
               
chr3:18001134-18001373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 91
               

               
Conread position:
               
445-694
               

               
Cow position:
               
chr3:69650952-69650708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
50, 90
               

               
Conread position:
               
446-611
               

               
Cow position:
               
chr3:71423613-71423452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 64
               

               
Conread position:
               
447-623
               

               
Cow position:
               
chr3:64373218-64373039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
448-697
               

               
Cow position:
               
chr3:49344632-49344884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 8
               

               
Conread position:
               
451-668
               

               
Cow position:
               
chr3:74787375-74787588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
451-697
               

               
Cow position:
               
chr3:40213090-40212841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
131, 83
               

               
Conread position:
               
454-615
               

               
Cow position:
               
chr3:10026739-10026584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
455-610
               

               
Cow position:
               
chr3:64648438-64648594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 81
               

               
Conread position:
               
455-613
               

               
Cow position:
               
chr3:50593966-50593809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
456-597
               

               
Cow position:
               
chr3:41652324-41652465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
456-614
               

               
Cow position:
               
chr3:21997840-21997682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
456-617
               

               
Cow position:
               
chr3:7427950-7428107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
456-617
               

               
Cow position:
               
chr3:20333955-20334118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
456-618
               

               
Cow position:
               
chr3:74900692-74900533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
456-679
               

               
Cow position:
               
chr3:67626395-67626183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
456-680
               

               
Cow position:
               
chr3:2637874-2638108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 81
               

               
Conread position:
               
456-680
               

               
Cow position:
               
chr3:84174249-84174479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
456-681
               

               
Cow position:
               
chr3:36913998-36914246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
456-684
               

               
Cow position:
               
chr3:68004754-68004530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
456-694
               

               
Cow position:
               
chr3:24596476-24596242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 80
               

               
Conread position:
               
456-696
               

               
Cow position:
               
chr3:3946986-3947211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
456-697
               

               
Cow position:
               
chr3:9026136-9025897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
131, 41
               

               
Conread position:
               
456-697
               

               
Cow position:
               
chr3:56949140-56948904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
457-641
               

               
Cow position:
               
chr3:15237739-15237560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
457-683
               

               
Cow position:
               
chr3:5305747-5305981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
458-591
               

               
Cow position:
               
chr3:29828198-29828064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
458-641
               

               
Cow position:
               
chr3:21641938-21642126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
458-680
               

               
Cow position:
               
chr3:11281716-11281944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
458-680
               

               
Cow position:
               
chr3:75173630-75173425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
458-681
               

               
Cow position:
               
chr3:9120795-9121018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
39, 65
               

               
Conread position:
               
458-693
               

               
Cow position:
               
chr3:48483131-48483363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
458-697
               

               
Cow position:
               
chr3:29334467-29334219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 81
               

               
Conread position:
               
459-641
               

               
Cow position:
               
chr3:16505524-16505354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
459-684
               

               
Cow position:
               
chr3:8349614-8349392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
459-695
               

               
Cow position:
               
chr3:39248073-39247842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
459-697
               

               
Cow position:
               
chr3:49996772-49996525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
36, 78
               

               
Conread position:
               
460-615
               

               
Cow position:
               
chr3:9588690-9588535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
460-693
               

               
Cow position:
               
chr3:75107726-75107959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
37, 76
               

               
Conread position:
               
460-695
               

               
Cow position:
               
chr3:44961052-44960827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
198, 74
               

               
Conread position:
               
460-696
               

               
Cow position:
               
chr3:83889199-83889441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 54
               

               
Conread position:
               
461-613
               

               
Cow position:
               
chr3:38100094-38100248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
461-673
               

               
Cow position:
               
chr3:26603602-26603378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
36, 77
               

               
Conread position:
               
461-681
               

               
Cow position:
               
chr3:19709063-19709281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
461-695
               

               
Cow position:
               
chr3:53084036-53083795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 149
               

               
Conread position:
               
462-696
               

               
Cow position:
               
chr3:59919986-59920233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
144, 30
               

               
Conread position:
               
463-697
               

               
Cow position:
               
chr3:35624589-35624350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 11
               

               
Conread position:
               
467-596
               

               
Cow position:
               
chr3:11292289-11292160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 68
               

               
Conread position:
               
467-621
               

               
Cow position:
               
chr3:20515859-20515705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 68
               

               
Conread position:
               
467-684
               

               
Cow position:
               
chr3:15973525-15973749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 68
               

               
Conread position:
               
467-684
               

               
Cow position:
               
chr3:52456877-52457088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
467-686
               

               
Cow position:
               
chr3:54905577-54905786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
467-687
               

               
Cow position:
               
chr3:74644516-74644742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
467-691
               

               
Cow position:
               
chr3:82366088-82366314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
468-642
               

               
Cow position:
               
chr3:82123588-82123419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
468-694
               

               
Cow position:
               
chr3:6728370-6728130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
468-694
               

               
Cow position:
               
chr3:10732850-10733065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
468-697
               

               
Cow position:
               
chr3:41863584-41863814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
468-697
               

               
Cow position:
               
chr3:58452008-58452238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 48
               

               
Conread position:
               
470-684
               

               
Cow position:
               
chr3:78071829-78071613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
473-603
               

               
Cow position:
               
chr3:20779505-20779380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
473-638
               

               
Cow position:
               
chr3:56704356-56704183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
473-697
               

               
Cow position:
               
chr3:83770696-83770928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
474-677
               

               
Cow position:
               
chr3:46559749-46559544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
474-697
               

               
Cow position:
               
chr3:22924409-22924188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
475-617
               

               
Cow position:
               
chr3:58384054-58384202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
476-607
               

               
Cow position:
               
chr3:24371890-24372020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
476-611
               

               
Cow position:
               
chr3:52634076-52634210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
476-684
               

               
Cow position:
               
chr3:5703146-5703356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
476-684
               

               
Cow position:
               
chr3:8814145-8813925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
477-615
               

               
Cow position:
               
chr3:35238982-35239119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 55
               

               
Conread position:
               
477-677
               

               
Cow position:
               
chr3:20021238-20021440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
17, 58
               

               
Conread position:
               
478-694
               

               
Cow position:
               
chr3:8523180-8522965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
479-695
               

               
Cow position:
               
chr3:15859406-15859194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
480-697
               

               
Cow position:
               
chr3:44594590-44594813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
481-684
               

               
Cow position:
               
chr3:11229392-11229191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 54
               

               
Conread position:
               
481-684
               

               
Cow position:
               
chr3:46259684-46259893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
6, 25
               

               
Conread position:
               
481-694
               

               
Cow position:
               
chr3:15160493-15160703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
481-694
               

               
Cow position:
               
chr3:67407393-67407179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
482-596
               

               
Cow position:
               
chr3:16601416-16601530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
482-680
               

               
Cow position:
               
chr3:45314318-45314527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
482-693
               

               
Cow position:
               
chr3:76056311-76056098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
483-676
               

               
Cow position:
               
chr3:59933346-59933551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
484-686
               

               
Cow position:
               
chr3:19788854-19788659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
486-687
               

               
Cow position:
               
chr3:75966803-75966598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
486-694
               

               
Cow position:
               
chr3:31115292-31115088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
486-697
               

               
Cow position:
               
chr3:51150106-51150322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
8, 49
               

               
Conread position:
               
487-684
               

               
Cow position:
               
chr3:73701483-73701677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
487-686
               

               
Cow position:
               
chr3:73421514-73421302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
491-684
               

               
Cow position:
               
chr3:58010844-58010653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
185, 18
               

               
Conread position:
               
493-615
               

               
Cow position:
               
chr3:35285029-35285150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
493-641
               

               
Cow position:
               
chr3:28870793-28870937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
493-683
               

               
Cow position:
               
chr3:50350983-50350800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
41, 94
               

               
Conread position:
               
493-684
               

               
Cow position:
               
chr3:27246973-27246788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
165, 41
               

               
Conread position:
               
493-684
               

               
Cow position:
               
chr3:73589785-73589587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
111, 42
               

               
Conread position:
               
494-618
               

               
Cow position:
               
chr3:77589500-77589624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 41
               

               
Conread position:
               
494-681
               

               
Cow position:
               
chr3:26393315-26393123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
494-695
               

               
Cow position:
               
chr3:35074865-35075060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
148, 40
               

               
Conread position:
               
496-615
               

               
Cow position:
               
chr3:20175037-20175155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
496-620
               

               
Cow position:
               
chr3:1534116-1533992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
496-679
               

               
Cow position:
               
chr3:25038003-25037829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
496-680
               

               
Cow position:
               
chr3:986003-986190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
146, 38
               

               
Conread position:
               
496-685
               

               
Cow position:
               
chr3:23640332-23640519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
147, 38
               

               
Conread position:
               
496-688
               

               
Cow position:
               
chr3:52845545-52845740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
148, 38
               

               
Conread position:
               
496-692
               

               
Cow position:
               
chr3:25702353-25702144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
105, 38
               

               
Conread position:
               
496-692
               

               
Cow position:
               
chr3:61024034-61023834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
146, 38
               

               
Conread position:
               
496-696
               

               
Cow position:
               
chr3:9718262-9718059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 7
               

               
Conread position:
               
496-697
               

               
Cow position:
               
chr3:70402633-70402832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
147, 39
               

               
Conread position:
               
496-697
               

               
Cow position:
               
chr3:76168643-76168438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
147, 39
               

               
Conread position:
               
496-697
               

               
Cow position:
               
chr3:80023320-80023123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
162, 22
               

               
Conread position:
               
497-694
               

               
Cow position:
               
chr3:23818481-23818677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
161, 37
               

               
Conread position:
               
498-687
               

               
Cow position:
               
chr3:22868729-22868534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 36
               

               
Conread position:
               
499-622
               

               
Cow position:
               
chr3:28556170-28556047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
111, 36
               

               
Conread position:
               
499-641
               

               
Cow position:
               
chr3:83199503-83199643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
499-673
               

               
Cow position:
               
chr3:62370047-62370225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
105, 34
               

               
Conread position:
               
499-674
               

               
Cow position:
               
chr3:70756650-70756470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
144, 35
               

               
Conread position:
               
499-676
               

               
Cow position:
               
chr3:28323210-28323381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
159, 10
               

               
Conread position:
               
499-681
               

               
Cow position:
               
chr3:32436632-32436814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
144, 14
               

               
Conread position:
               
499-684
               

               
Cow position:
               
chr3:8526372-8526200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
159, 28
               

               
Conread position:
               
499-684
               

               
Cow position:
               
chr3:28897030-28896842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
142, 36
               

               
Conread position:
               
499-684
               

               
Cow position:
               
chr3:56943934-56943751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
144, 35
               

               
Conread position:
               
499-684
               

               
Cow position:
               
chr3:76415911-76415704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
104, 36
               

               
Conread position:
               
499-684
               

               
Cow position:
               
chr3:84137823-84137633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
144, 35
               

               
Conread position:
               
499-685
               

               
Cow position:
               
chr3:23804496-23804681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
12, 36
               

               
Conread position:
               
499-687
               

               
Cow position:
               
chr3:47199135-47198942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 29
               

               
Conread position:
               
499-689
               

               
Cow position:
               
chr3:59681912-59681722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
143, 35
               

               
Conread position:
               
499-695
               

               
Cow position:
               
chr3:7381837-7381639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
499-697
               

               
Cow position:
               
chr3:36412096-36411900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 153
               

               
Conread position:
               
499-697
               

               
Cow position:
               
chr3:44959934-44960140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
143, 35
               

               
Conread position:
               
499-697
               

               
Cow position:
               
chr3:65308462-65308258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
143, 35
               

               
Conread position:
               
500-614
               

               
Cow position:
               
chr3:13949566-13949452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
500-639
               

               
Cow position:
               
chr3:35582833-35582969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 9
               

               
Conread position:
               
500-668
               

               
Cow position:
               
chr3:59828400-59828225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
96, 35
               

               
Conread position:
               
500-680
               

               
Cow position:
               
chr3:3164117-3163940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
500-681
               

               
Cow position:
               
chr3:19044773-19044592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
142, 34
               

               
Conread position:
               
500-684
               

               
Cow position:
               
chr3:41366717-41366519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
141, 34
               

               
Conread position:
               
500-684
               

               
Cow position:
               
chr3:62186144-62186339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
106, 34
               

               
Conread position:
               
500-684
               

               
Cow position:
               
chr3:80958518-80958330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
143, 35
               

               
Conread position:
               
500-693
               

               
Cow position:
               
chr3:62789961-62789762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
501-680
               

               
Cow position:
               
chr3:37641319-37641501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
501-684
               

               
Cow position:
               
chr3:81616459-81616271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
138, 33
               

               
Conread position:
               
501-693
               

               
Cow position:
               
chr3:20911416-20911221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
142, 33
               

               
Conread position:
               
501-695
               

               
Cow position:
               
chr3:37851490-37851688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
142, 125
               

               
Conread position:
               
502-636
               

               
Cow position:
               
chr3:48783344-48783474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
502-695
               

               
Cow position:
               
chr3:70333226-70333037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
140, 27
               

               
Conread position:
               
502-695
               

               
Cow position:
               
chr3:75183303-75183509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
90, 32
               

               
Conread position:
               
502-696
               

               
Cow position:
               
chr3:17531743-17531550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
161, 29
               

               
Conread position:
               
503-610
               

               
Cow position:
               
chr3:27670409-27670515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
504-680
               

               
Cow position:
               
chr3:44782336-44782513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
139, 30
               

               
Conread position:
               
504-683
               

               
Cow position:
               
chr3:23037512-23037330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
133, 30
               

               
Conread position:
               
504-684
               

               
Cow position:
               
chr3:76300767-76300953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
505-633
               

               
Cow position:
               
chr3:6040447-6040571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
509-620
               

               
Cow position:
               
chr3:53256530-53256639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
509-674
               

               
Cow position:
               
chr3:3292466-3292625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
509-683
               

               
Cow position:
               
chr3:60186147-60186331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
509-689
               

               
Cow position:
               
chr3:562792-562605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
509-695
               

               
Cow position:
               
chr3:22903754-22903567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 111
               

               
Conread position:
               
509-696
               

               
Cow position:
               
chr3:32376815-32377005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
132, 26
               

               
Conread position:
               
509-697
               

               
Cow position:
               
chr3:31352873-31352692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
134, 25
               

               
Conread position:
               
510-683
               

               
Cow position:
               
chr3:43896057-43895885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
133, 24
               

               
Conread position:
               
510-694
               

               
Cow position:
               
chr3:16107365-16107186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
510-697
               

               
Cow position:
               
chr3:26977537-26977729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
511-695
               

               
Cow position:
               
chr3:74050698-74050516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
512-674
               

               
Cow position:
               
chr3:67942531-67942364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
131, 22
               

               
Conread position:
               
512-684
               

               
Cow position:
               
chr3:17039617-17039789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
512-693
               

               
Cow position:
               
chr3:24774658-24774830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
131, 22
               

               
Conread position:
               
512-694
               

               
Cow position:
               
chr3:25060332-25060503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
512-696
               

               
Cow position:
               
chr3:18700106-18699914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
130, 22
               

               
Conread position:
               
512-697
               

               
Cow position:
               
chr3:21959664-21959857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
513-676
               

               
Cow position:
               
chr3:4518177-4518013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
128, 22
               

               
Conread position:
               
513-679
               

               
Cow position:
               
chr3:5737757-5737918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
130, 21
               

               
Conread position:
               
513-680
               

               
Cow position:
               
chr3:64910090-64909920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
130, 21
               

               
Conread position:
               
513-685
               

               
Cow position:
               
chr3:39812053-39812239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 21
               

               
Conread position:
               
513-692
               

               
Cow position:
               
chr3:3453585-3453767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
128, 22
               

               
Conread position:
               
513-693
               

               
Cow position:
               
chr3:19611346-19611164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
127, 21
               

               
Conread position:
               
513-695
               

               
Cow position:
               
chr3:68565827-68566001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
513-695
               

               
Cow position:
               
chr3:79398148-79398336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
130, 21
               

               
Conread position:
               
513-697
               

               
Cow position:
               
chr3:68094150-68094344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
514-641
               

               
Cow position:
               
chr3:25692032-25692157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
514-687
               

               
Cow position:
               
chr3:19641066-19641247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
93, 8
               

               
Conread position:
               
514-692
               

               
Cow position:
               
chr3:29234674-29234491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
92, 17
               

               
Conread position:
               
515-685
               

               
Cow position:
               
chr3:19435124-19435288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
515-697
               

               
Cow position:
               
chr3:31896949-31896774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
516-680
               

               
Cow position:
               
chr3:77098814-77098649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
127, 18
               

               
Conread position:
               
518-696
               

               
Cow position:
               
chr3:55106138-55105955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
124, 16
               

               
Conread position:
               
518-697
               

               
Cow position:
               
chr3:68624228-68624412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
124, 16
               

               
Conread position:
               
519-668
               

               
Cow position:
               
chr3:10115310-10115458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
122, 15
               

               
Conread position:
               
519-684
               

               
Cow position:
               
chr3:3262822-3262644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
519-697
               

               
Cow position:
               
chr3:57641812-57641996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
520-697
               

               
Cow position:
               
chr3:82425066-82424890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
522-682
               

               
Cow position:
               
chr3:2636964-2637122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
119, 12
               

               
Conread position:
               
532-685
               

               
Cow position:
               
chr3:75907935-75908091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
533-680
               

               
Cow position:
               
chr3:621459-621616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
533-680
               

               
Cow position:
               
chr3:16867848-16867998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
58, 38
               

               
Conread position:
               
533-680
               

               
Cow position:
               
chr3:22078100-22078253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
533-681
               

               
Cow position:
               
chr3:44218790-44218944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
533-697
               

               
Cow position:
               
chr3:66120733-66120893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
110, 86
               

               
Conread position:
               
533-697
               

               
Cow position:
               
chr3:83325237-83325400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 79
               

               
Conread position:
               
535-681
               

               
Cow position:
               
chr3:59635339-59635479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 63
               

               
Conread position:
               
535-690
               

               
Cow position:
               
chr3:40344003-40343853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
535-697
               

               
Cow position:
               
chr3:66639797-66639953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
538-695
               

               
Cow position:
               
chr3:58497687-58497848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
97, 149
               

               
Conread position:
               
541-693
               

               
Cow position:
               
chr3:24370434-24370579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
102, 59
               

               
Conread position:
               
545-695
               

               
Cow position:
               
chr3:39967452-39967306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
98, 53
               

               
Conread position:
               
545-697
               

               
Cow position:
               
chr3:5046117-5045970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               
Show alignments to all cow chromosomes.