Cow genome map
| Conread name: | Pig3-SRG8016H04 |
| Conread position: | 1-158 |
| Cow position: | chr16:4192247-4192398 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 144, 54 |
| Conread position: | 1-164 |
| Cow position: | chr16:42107813-42107657 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 144, 15 |
| Conread position: | 1-169 |
| Cow position: | chr16:28444303-28444465 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 144, 54 |
| Conread position: | 1-176 |
| Cow position: | chr16:42539398-42539571 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 144, 9 |
| Conread position: | 1-178 |
| Cow position: | chr16:12220870-12220696 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 144, 54 |
| Conread position: | 1-184 |
| Cow position: | chr16:33290571-33290393 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 144, 56 |
| Conread position: | 2-138 |
| Cow position: | chr16:28001044-28001176 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 2-143 |
| Cow position: | chr16:21974775-21974912 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 2-149 |
| Cow position: | chr16:42992402-42992261 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 143, 55 |
| Conread position: | 2-153 |
| Cow position: | chr16:31159165-31159317 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 133 |
| Conread position: | 2-153 |
| Cow position: | chr16:46184344-46184198 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 54 |
| Conread position: | 2-154 |
| Cow position: | chr16:33632495-33632635 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 143, 52 |
| Conread position: | 2-154 |
| Cow position: | chr16:44138307-44138453 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 143, 47 |
| Conread position: | 2-158 |
| Cow position: | chr16:8205899-8206048 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 143, 14 |
| Conread position: | 2-158 |
| Cow position: | chr16:52325413-52325563 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 143, 55 |
| Conread position: | 2-160 |
| Cow position: | chr16:7665823-7665671 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-160 |
| Cow position: | chr16:12281001-12281162 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 2-160 |
| Cow position: | chr16:17617177-17617329 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-160 |
| Cow position: | chr16:38905041-38905200 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 53, 96 |
| Conread position: | 2-163 |
| Cow position: | chr16:51610642-51610803 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 143, 57 |
| Conread position: | 2-165 |
| Cow position: | chr16:29038100-29037944 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-166 |
| Cow position: | chr16:43323043-43322877 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 2-167 |
| Cow position: | chr16:8953491-8953657 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 65 |
| Conread position: | 2-167 |
| Cow position: | chr16:10033048-10032889 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-168 |
| Cow position: | chr16:15726169-15726334 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 2-169 |
| Cow position: | chr16:7812876-7812715 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-169 |
| Cow position: | chr16:9279921-9280092 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 2-169 |
| Cow position: | chr16:12091469-12091638 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 53, 79 |
| Conread position: | 2-169 |
| Cow position: | chr16:15905061-15905225 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 143, 16 |
| Conread position: | 2-169 |
| Cow position: | chr16:23955648-23955807 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 143, 16 |
| Conread position: | 2-169 |
| Cow position: | chr16:24674489-24674653 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-169 |
| Cow position: | chr16:42444343-42444181 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-169 |
| Cow position: | chr16:46548079-46548244 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-169 |
| Cow position: | chr16:48448924-48448748 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 127 |
| Conread position: | 2-169 |
| Cow position: | chr16:50442735-50442573 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-169 |
| Cow position: | chr16:50569443-50569288 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-169 |
| Cow position: | chr16:52389814-52389645 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 63, 53 |
| Conread position: | 2-169 |
| Cow position: | chr16:56796471-56796641 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 2-171 |
| Cow position: | chr16:12077298-12077464 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 143, 14 |
| Conread position: | 2-176 |
| Cow position: | chr16:19282190-19282023 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 143, 40 |
| Conread position: | 2-176 |
| Cow position: | chr16:45047031-45046856 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 54, 69 |
| Conread position: | 2-177 |
| Cow position: | chr16:9578310-9578474 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 143, 54 |
| Conread position: | 2-193 |
| Cow position: | chr16:9097209-9097025 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 3-159 |
| Cow position: | chr16:15203175-15203334 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 53, 15 |
| Conread position: | 4-157 |
| Cow position: | chr16:23187734-23187581 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 51, 65 |
| Conread position: | 4-158 |
| Cow position: | chr16:29060565-29060413 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 141, 51 |
| Conread position: | 4-169 |
| Cow position: | chr16:6802501-6802665 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 141, 55 |
| Conread position: | 4-169 |
| Cow position: | chr16:27759419-27759581 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 141, 52 |
| Conread position: | 4-169 |
| Cow position: | chr16:50286694-50286537 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 141, 39 |
| Conread position: | 5-167 |
| Cow position: | chr16:14046330-14046502 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 139 |
| Conread position: | 5-169 |
| Cow position: | chr16:56670730-56670894 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 140, 50 |
| Conread position: | 6-169 |
| Cow position: | chr16:18757655-18757814 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 139, 49 |
| Conread position: | 6-181 |
| Cow position: | chr16:7928203-7928373 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 139, 49 |
| Conread position: | 18-157 |
| Cow position: | chr16:9973315-9973462 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 18-157 |
| Cow position: | chr16:14005933-14006082 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 18-165 |
| Cow position: | chr16:29026383-29026234 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 18-167 |
| Cow position: | chr16:7619007-7619157 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 37, 77 |
| Conread position: | 18-169 |
| Cow position: | chr16:5243257-5243111 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 126, 44 |
| Conread position: | 18-169 |
| Cow position: | chr16:15960112-15960265 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 18-194 |
| Cow position: | chr16:14343749-14343578 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 127, 40 |
| Conread position: | 23-157 |
| Cow position: | chr16:43105340-43105478 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 23-165 |
| Cow position: | chr16:17135899-17135753 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 24-169 |
| Cow position: | chr16:22327680-22327535 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 29 |
| Conread position: | 31-169 |
| Cow position: | chr16:27032739-27032601 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 9 |
| Conread position: | 48-190 |
| Cow position: | chr16:7496397-7496258 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 97, 9 |
| Conread position: | 50-169 |
| Cow position: | chr16:11102671-11102796 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 51-169 |
| Cow position: | chr16:4736443-4736559 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 76 |
| Conread position: | 54-169 |
| Cow position: | chr16:11922887-11923003 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 28 |
| Conread position: | 54-185 |
| Cow position: | chr16:51130127-51129999 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 91, 72 |
| Conread position: | 57-166 |
| Cow position: | chr16:6319341-6319231 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 57-177 |
| Cow position: | chr16:48099598-48099478 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 88, 111 |
| Conread position: | 62-167 |
| Cow position: | chr16:16280240-16280346 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 69-187 |
| Cow position: | chr16:39165364-39165246 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 12 |
| Conread position: | 73-217 |
| Cow position: | chr16:38355307-38355454 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 76-169 |
| Cow position: | chr16:30358944-30359038 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 80 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 84-194 |
| Cow position: | chr16:35026259-35026370 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 374-551 |
| Cow position: | chr16:21002118-21002295 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 392-585 |
| Cow position: | chr16:12457846-12458040 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 30, 61 |
| Conread position: | 393-586 |
| Cow position: | chr16:16232295-16232101 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 395-586 |
| Cow position: | chr16:34998387-34998579 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 5, 177 |
| Conread position: | 396-556 |
| Cow position: | chr16:30580890-30581045 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 153, 23 |
| Conread position: | 396-567 |
| Cow position: | chr16:9097253-9097087 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 396-567 |
| Cow position: | chr16:29038150-29037979 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 38 |
| Conread position: | 398-545 |
| Cow position: | chr16:52365673-52365820 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 398-551 |
| Cow position: | chr16:52325365-52325519 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 398-560 |
| Cow position: | chr16:34153341-34153500 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 398-567 |
| Cow position: | chr16:56912457-56912624 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 97, 54 |
| Conread position: | 398-569 |
| Cow position: | chr16:14210550-14210719 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 398-579 |
| Cow position: | chr16:27326892-27327073 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 398-586 |
| Cow position: | chr16:19282237-19282052 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 399-579 |
| Cow position: | chr16:27051275-27051097 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 401-555 |
| Cow position: | chr16:12274296-12274145 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 137, 17 |
| Conread position: | 401-559 |
| Cow position: | chr16:9729977-9730134 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 43 |
| Conread position: | 401-560 |
| Cow position: | chr16:30368598-30368755 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 401-560 |
| Cow position: | chr16:38663480-38663640 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 26, 129 |
| Conread position: | 401-567 |
| Cow position: | chr16:25419024-25419190 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 401-579 |
| Cow position: | chr16:2223167-2223345 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 401-586 |
| Cow position: | chr16:5382413-5382228 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 133, 170 |
| Conread position: | 402-567 |
| Cow position: | chr16:10033092-10032926 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 402-567 |
| Cow position: | chr16:14343800-14343643 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 403-567 |
| Cow position: | chr16:56082133-56082301 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 403-586 |
| Cow position: | chr16:22984974-22984800 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 405-567 |
| Cow position: | chr16:19756557-19756713 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 33 |
| Conread position: | 408-527 |
| Cow position: | chr16:17209083-17209203 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 408-560 |
| Cow position: | chr16:7665860-7665708 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 408-567 |
| Cow position: | chr16:20743099-20743250 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 408-567 |
| Cow position: | chr16:45278756-45278600 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 408-567 |
| Cow position: | chr16:50078537-50078695 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 408-586 |
| Cow position: | chr16:3032493-3032670 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 162 |
| Conread position: | 408-586 |
| Cow position: | chr16:17180377-17180206 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 412-560 |
| Cow position: | chr16:18243953-18243803 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 413-555 |
| Cow position: | chr16:32301788-32301930 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 413-581 |
| Cow position: | chr16:33302400-33302234 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 414-555 |
| Cow position: | chr16:48455886-48455748 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 415-551 |
| Cow position: | chr16:15714325-15714189 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 415-556 |
| Cow position: | chr16:258070-258211 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 123, 112 |
| Conread position: | 415-559 |
| Cow position: | chr16:21442396-21442539 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 103, 31 |
| Conread position: | 415-560 |
| Cow position: | chr16:13995983-13996125 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 415-567 |
| Cow position: | chr16:14841577-14841424 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 415-567 |
| Cow position: | chr16:31559117-31558965 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 123, 110 |
| Conread position: | 415-567 |
| Cow position: | chr16:42107842-42107693 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 415-567 |
| Cow position: | chr16:42992433-42992280 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 415-579 |
| Cow position: | chr16:50409461-50409299 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 415-581 |
| Cow position: | chr16:50442766-50442598 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 416-533 |
| Cow position: | chr16:11634883-11634766 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 417-584 |
| Cow position: | chr16:8522180-8522343 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 418-567 |
| Cow position: | chr16:9616633-9616785 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 13 |
| Conread position: | 418-567 |
| Cow position: | chr16:10032849-10032703 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 418-567 |
| Cow position: | chr16:28233095-28233241 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 420-551 |
| Cow position: | chr16:9615007-9615138 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 420-551 |
| Cow position: | chr16:15957271-15957401 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 64 |
| Conread position: | 420-559 |
| Cow position: | chr16:23054035-23053895 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 11 |
| Conread position: | 420-560 |
| Cow position: | chr16:7583606-7583468 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 420-560 |
| Cow position: | chr16:33073678-33073815 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 420-560 |
| Cow position: | chr16:33290595-33290455 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 420-560 |
| Cow position: | chr16:56595180-56595319 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 420-581 |
| Cow position: | chr16:15370893-15370736 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 84 |
| Conread position: | 421-567 |
| Cow position: | chr16:29311735-29311587 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 422-567 |
| Cow position: | chr16:44138284-44138429 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 423-581 |
| Cow position: | chr16:15407351-15407509 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 424-559 |
| Cow position: | chr16:47274520-47274655 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 424-567 |
| Cow position: | chr16:7928179-7928321 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 425-586 |
| Cow position: | chr16:8065682-8065841 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 434-559 |
| Cow position: | chr16:8083733-8083858 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 76, 55 |
| Conread position: | 436-554 |
| Cow position: | chr16:7441908-7442027 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 437-548 |
| Cow position: | chr16:35297593-35297484 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 437-559 |
| Cow position: | chr16:51143990-51143871 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 439-537 |
| Cow position: | chr16:33632489-33632586 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 442-556 |
| Cow position: | chr16:31241106-31241219 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 442-567 |
| Cow position: | chr16:4910336-4910461 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 442-575 |
| Cow position: | chr16:7270349-7270483 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 445-567 |
| Cow position: | chr16:12220869-12220745 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
Show alignments to all cow chromosomes.