Cow genome map


           Conread name:
           Pig3-SRG8016H04
        

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               144, 54
               

               Conread position:
               2-137
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               2-160
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               143, 53
               

               Conread position:
               2-160
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               143, 15
               

               Conread position:
               2-163
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               143, 28
               

               Conread position:
               2-167
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               143, 53
               

               Conread position:
               2-167
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               2-167
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               125, 53
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               143, 53
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               143, 53
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               145, 53
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               143, 53
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               145, 55
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               143, 46
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               140, 53
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               143, 53
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               143, 55
               

               Conread position:
               2-170
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               142, 55
               

               Conread position:
               2-174
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               142, 25
               

               Conread position:
               2-181
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               141, 48
               

               Conread position:
               2-182
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               4-158
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               141, 51
               

               Conread position:
               4-168
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               141, 45
               

               Conread position:
               4-169
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               51, 156
               

               Conread position:
               4-170
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               71, 44
               

               Conread position:
               5-169
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               50, 95
               

               Conread position:
               7-223
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               138, 48
               

               Conread position:
               10-169
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               135, 45
               

               Conread position:
               18-158
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               18-182
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               23-151
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               23-169
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               122, 35
               

               Conread position:
               23-173
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               24-178
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 27
               

               Conread position:
               54-169
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               57-167
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               58-169
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               76-169
               

               Cow position:
               
               

               Alignm length:
               95
               

               Alignm identity:
               82
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               80-168
               

               Cow position:
               
               

               Alignm length:
               90
               

               Alignm identity:
               78
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               387-559
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               117, 10
               

               Conread position:
               392-579
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               393-559
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               395-551
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               396-551
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               23, 11
               

               Conread position:
               398-559
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               398-560
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               398-567
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               14, 85
               

               Conread position:
               398-567
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               21, 122
               

               Conread position:
               398-579
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 129
               

               Conread position:
               399-560
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               400-540
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               400-545
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               401-536
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               401-559
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               401-567
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               19, 123
               

               Conread position:
               401-567
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               402-560
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               113, 18
               

               Conread position:
               403-543
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               403-555
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               408-556
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               408-556
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               408-559
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               408-560
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               408-567
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               410-550
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               101, 21
               

               Conread position:
               411-560
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 120
               

               Conread position:
               412-560
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               413-563
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               414-567
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               415-556
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               415-560
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               415-560
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               58, 102
               

               Conread position:
               415-561
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               415-579
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               415-581
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               415-586
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 156
               

               Conread position:
               418-559
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               418-567
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               419-533
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               419-544
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               419-567
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               420-581
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               421-568
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               423-567
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               426-567
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               434-551
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               435-559
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               435-560
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               435-567
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               435-567
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               435-567
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               435-581
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               437-551
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               442-567
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               448-560
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               64, 0
               
Show alignments to all cow chromosomes.