Cow genome map

Conread name: Pig3-SRG8016H04

Conread position: 1-169
Cow position: chr24:16641072-16640909 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 144, 54

Conread position: 1-169
Cow position: chr24:36485628-36485803 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 114, 15

Conread position: 2-135
Cow position: chr24:34533295-34533156 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 2-150
Cow position: chr24:38006554-38006699 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 143, 53

Conread position: 2-157
Cow position: chr24:27284982-27284828 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 142, 53

Conread position: 2-168
Cow position: chr24:18313759-18313933 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 2-169
Cow position: chr24:2261828-2261667 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 143, 53

Conread position: 2-169
Cow position: chr24:16895267-16895437 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 94

Conread position: 2-169
Cow position: chr24:18741407-18741572 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 143, 49

Conread position: 2-169
Cow position: chr24:19624023-19623855 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 87, 53

Conread position: 2-169
Cow position: chr24:25142775-25142609 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 143, 53

Conread position: 2-169
Cow position: chr24:27553258-27553095 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 143, 29

Conread position: 2-169
Cow position: chr24:32230346-32230506 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 143, 42

Conread position: 2-169
Cow position: chr24:33238096-33238265 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 2-169
Cow position: chr24:33944564-33944401 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 143, 53

Conread position: 2-174
Cow position: chr24:44987214-44987380 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 143, 53

Conread position: 2-175
Cow position: chr24:27271087-27270920 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 143, 53

Conread position: 2-176
Cow position: chr24:27402037-27402210 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 71, 51

Conread position: 2-183
Cow position: chr24:5152684-5152508 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 143, 53

Conread position: 2-188
Cow position: chr24:29677751-29677937 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 17, 54

Conread position: 2-214
Cow position: chr24:18810992-18810782 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 143, 53

Conread position: 3-177
Cow position: chr24:250378-250546 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 142, 51

Conread position: 4-154
Cow position: chr24:10840749-10840905 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 4-158
Cow position: chr24:11028531-11028678 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 141, 51

Conread position: 4-169
Cow position: chr24:32739107-32739270 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 104

Conread position: 18-169
Cow position: chr24:17689466-17689611 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 127, 37

Conread position: 18-169
Cow position: chr24:28470523-28470680 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 23-158
Cow position: chr24:40130275-40130140 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 122, 33

Conread position: 23-160
Cow position: chr24:34301899-34302029 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 122, 32

Conread position: 23-169
Cow position: chr24:24457102-24457250 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 76

Conread position: 23-169
Cow position: chr24:28690830-28690685 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 122, 32

Conread position: 23-169
Cow position: chr24:39218406-39218552 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 122, 32

Conread position: 23-176
Cow position: chr24:41406040-41405887 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 124, 32

Conread position: 24-169
Cow position: chr24:10300216-10300076 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 121, 48

Conread position: 26-169
Cow position: chr24:22235613-22235467 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 41-176
Cow position: chr24:28326953-28327087 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 104, 40

Conread position: 54-158
Cow position: chr24:21638693-21638797 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 54-158
Cow position: chr24:30202940-30202835 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 49

Conread position: 54-206
Cow position: chr24:41068379-41068225 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 20, 121

Conread position: 368-582
Cow position: chr24:15861355-15861570 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 55

Conread position: 383-544
Cow position: chr24:27149601-27149445 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 13

Conread position: 394-567
Cow position: chr24:39910822-39910994 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 150, 0

Conread position: 396-567
Cow position: chr24:18405075-18405242 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 396-567
Cow position: chr24:22420166-22419999 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 398-560
Cow position: chr24:27040255-27040093 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 138, 129

Conread position: 398-567
Cow position: chr24:11028482-11028650 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 131, 0

Conread position: 398-586
Cow position: chr24:12121107-12120918 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 174

Conread position: 398-586
Cow position: chr24:22155535-22155347 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 140, 125

Conread position: 399-550
Cow position: chr24:21606472-21606623 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 401-556
Cow position: chr24:19763330-19763481 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 139, 30

Conread position: 401-579
Cow position: chr24:18750911-18750734 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 402-556
Cow position: chr24:4634967-4635118 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 402-567
Cow position: chr24:44775975-44776138 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 402-568
Cow position: chr24:22567307-22567141 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 404-560
Cow position: chr24:27323751-27323599 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 55

Conread position: 405-556
Cow position: chr24:7917181-7917332 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 407-556
Cow position: chr24:12241918-12241768 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 407-579
Cow position: chr24:44896237-44896065 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 11

Conread position: 408-559
Cow position: chr24:38006516-38006671 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 408-560
Cow position: chr24:35210255-35210100 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 21, 124

Conread position: 408-567
Cow position: chr24:40055319-40055473 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 408-581
Cow position: chr24:3193076-3193248 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 408-586
Cow position: chr24:21519627-21519447 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 410-556
Cow position: chr24:18484800-18484946 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 120

Conread position: 410-560
Cow position: chr24:31383301-31383161 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 412-567
Cow position: chr24:38693685-38693840 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 58

Conread position: 414-586
Cow position: chr24:27906627-27906460 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 415-560
Cow position: chr24:12200220-12200363 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 415-560
Cow position: chr24:26588406-26588266 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 415-567
Cow position: chr24:250347-250499 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 415-567
Cow position: chr24:17689423-17689572 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 100, 43

Conread position: 415-567
Cow position: chr24:18811020-18810870 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 415-567
Cow position: chr24:19624052-19623894 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 90, 16

Conread position: 415-567
Cow position: chr24:25947672-25947823 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 415-567
Cow position: chr24:30483757-30483902 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 418-581
Cow position: chr24:19535067-19535231 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 115
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 419-560
Cow position: chr24:22079646-22079506 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 420-559
Cow position: chr24:29587183-29587047 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 420-560
Cow position: chr24:13586808-13586945 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 420-560
Cow position: chr24:43445828-43445968 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 33, 97

Conread position: 420-579
Cow position: chr24:9300813-9300654 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 420-586
Cow position: chr24:5152709-5152545 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 141, 0

Conread position: 423-567
Cow position: chr24:18702580-18702437 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 435-560
Cow position: chr24:18874652-18874775 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 106, 0

Conread position: 437-567
Cow position: chr24:35405200-35405330 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 439-567
Cow position: chr24:44987208-44987336 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 441-547
Cow position: chr24:29505011-29505117 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.