Cow genome map
| Conread name: | Pig3-SRG8016H04 |
| Conread position: | 1-195 |
| Cow position: | chr26:19671677-19671495 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 175, 54 |
| Conread position: | 1-216 |
| Cow position: | chr26:6823359-6823154 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 200, 26 |
| Conread position: | 2-140 |
| Cow position: | chr26:32842585-32842716 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 2-153 |
| Cow position: | chr26:33253118-33253259 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-160 |
| Cow position: | chr26:5407178-5407029 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 143, 14 |
| Conread position: | 2-160 |
| Cow position: | chr26:31711866-31712018 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-160 |
| Cow position: | chr26:34026835-34026987 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-165 |
| Cow position: | chr26:22901055-22901220 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 2-167 |
| Cow position: | chr26:9501908-9501750 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 143, 15 |
| Conread position: | 2-169 |
| Cow position: | chr26:10965387-10965553 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 99, 54 |
| Conread position: | 2-169 |
| Cow position: | chr26:16435452-16435615 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 143, 8 |
| Conread position: | 2-169 |
| Cow position: | chr26:26244970-26245129 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-169 |
| Cow position: | chr26:26293981-26294155 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 28 |
| Conread position: | 2-169 |
| Cow position: | chr26:32834375-32834538 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-169 |
| Cow position: | chr26:32981272-32981433 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-176 |
| Cow position: | chr26:12940606-12940433 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 143, 16 |
| Conread position: | 2-178 |
| Cow position: | chr26:34581012-34580834 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-191 |
| Cow position: | chr26:6714100-6714284 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 142, 54 |
| Conread position: | 2-197 |
| Cow position: | chr26:35397331-35397134 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 54, 143 |
| Conread position: | 2-223 |
| Cow position: | chr26:830012-829793 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 143, 46 |
| Conread position: | 4-169 |
| Cow position: | chr26:19774078-19774258 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 4-169 |
| Cow position: | chr26:28244028-28243870 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 141, 50 |
| Conread position: | 4-169 |
| Cow position: | chr26:29663957-29664118 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 140, 51 |
| Conread position: | 16-169 |
| Cow position: | chr26:31903353-31903208 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 129, 7 |
| Conread position: | 18-160 |
| Cow position: | chr26:7154059-7153919 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 127, 19 |
| Conread position: | 18-178 |
| Cow position: | chr26:33392584-33392425 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 127, 22 |
| Conread position: | 23-162 |
| Cow position: | chr26:24453723-24453862 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 56, 9 |
| Conread position: | 66-193 |
| Cow position: | chr26:25074861-25074734 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 15 |
| Conread position: | 382-581 |
| Cow position: | chr26:3707062-3706858 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 46, 78 |
| Conread position: | 392-567 |
| Cow position: | chr26:1041252-1041079 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 396-579 |
| Cow position: | chr26:27768517-27768335 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 33, 64 |
| Conread position: | 397-581 |
| Cow position: | chr26:2930014-2930193 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 399-584 |
| Cow position: | chr26:8811721-8811534 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 401-586 |
| Cow position: | chr26:29374008-29373822 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 182, 0 |
| Conread position: | 402-560 |
| Cow position: | chr26:5407219-5407066 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 402-567 |
| Cow position: | chr26:31711824-31711988 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 138, 16 |
| Conread position: | 402-579 |
| Cow position: | chr26:12027999-12028169 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 403-567 |
| Cow position: | chr26:4807798-4807634 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 403-567 |
| Cow position: | chr26:33253079-33253236 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 405-581 |
| Cow position: | chr26:830052-829871 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 408-549 |
| Cow position: | chr26:16797730-16797869 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 13, 106 |
| Conread position: | 408-551 |
| Cow position: | chr26:16423827-16423688 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 130, 26 |
| Conread position: | 408-559 |
| Cow position: | chr26:23096960-23097106 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 408-560 |
| Cow position: | chr26:35530484-35530333 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 408-567 |
| Cow position: | chr26:28598-28751 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 130, 88 |
| Conread position: | 408-567 |
| Cow position: | chr26:4363535-4363380 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 130, 50 |
| Conread position: | 408-567 |
| Cow position: | chr26:27482327-27482486 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 408-567 |
| Cow position: | chr26:33728404-33728564 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 408-581 |
| Cow position: | chr26:9661994-9662166 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 409-586 |
| Cow position: | chr26:16166459-16166632 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 415-551 |
| Cow position: | chr26:21418225-21418361 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 415-551 |
| Cow position: | chr26:26919765-26919629 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 415-556 |
| Cow position: | chr26:10764443-10764303 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 415-560 |
| Cow position: | chr26:32830309-32830167 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 415-560 |
| Cow position: | chr26:34335972-34335827 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 5, 101 |
| Conread position: | 415-567 |
| Cow position: | chr26:8811360-8811207 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 415-567 |
| Cow position: | chr26:28202527-28202679 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 415-579 |
| Cow position: | chr26:21822819-21822977 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 415-583 |
| Cow position: | chr26:33475929-33475758 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 418-579 |
| Cow position: | chr26:34026808-34026969 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 420-546 |
| Cow position: | chr26:15908537-15908663 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 118, 107 |
| Conread position: | 420-548 |
| Cow position: | chr26:6714076-6714203 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 119, 11 |
| Conread position: | 426-559 |
| Cow position: | chr26:25029754-25029621 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 426-578 |
| Cow position: | chr26:35678066-35677910 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 435-560 |
| Cow position: | chr26:4167141-4167266 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 79, 118 |
| Conread position: | 435-560 |
| Cow position: | chr26:19671686-19671563 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 437-549 |
| Cow position: | chr26:7085554-7085666 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 442-560 |
| Cow position: | chr26:9501911-9501795 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.