Cow genome map


           Conread name:
           Pig3-SRG8016H04
        

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-161
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               78, 34
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               144, 54
               

               Conread position:
               1-169
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-169
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               143, 49
               

               Conread position:
               2-148
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-154
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               143, 51
               

               Conread position:
               2-157
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               143, 53
               

               Conread position:
               2-165
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               143, 31
               

               Conread position:
               2-165
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               53, 161
               

               Conread position:
               2-166
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               142, 53
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               143, 48
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               143, 52
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               143, 53
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               143, 53
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               143, 14
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               143, 53
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               2-174
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               143, 53
               

               Conread position:
               2-186
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               3-169
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               142, 47
               

               Conread position:
               3-176
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               142, 52
               

               Conread position:
               4-157
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               141, 51
               

               Conread position:
               4-167
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               141, 50
               

               Conread position:
               4-168
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               51, 108
               

               Conread position:
               4-192
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               141, 54
               

               Conread position:
               10-171
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               18-160
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               127, 37
               

               Conread position:
               18-169
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               127, 13
               

               Conread position:
               18-182
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               127, 37
               

               Conread position:
               19-168
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               126, 36
               

               Conread position:
               19-169
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               126, 36
               

               Conread position:
               19-178
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               52-169
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               54-167
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               387-560
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               9, 22
               

               Conread position:
               388-560
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               26, 19
               

               Conread position:
               390-555
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               390-559
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               128, 16
               

               Conread position:
               391-555
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               391-556
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               392-525
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               397-567
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               107, 11
               

               Conread position:
               398-560
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               398-567
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               400-567
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               400-579
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               16, 94
               

               Conread position:
               401-548
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               401-578
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               19, 42
               

               Conread position:
               401-579
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               401-581
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               403-560
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               404-559
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               5, 91
               

               Conread position:
               405-560
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               405-567
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               407-555
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               408-547
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               408-550
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               408-560
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               408-567
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               408-567
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               408-567
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               408-579
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 67
               

               Conread position:
               408-579
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               84, 23
               

               Conread position:
               408-586
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               16, 161
               

               Conread position:
               408-586
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               409-567
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               409-567
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               409-586
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               410-528
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               54, 111
               

               Conread position:
               410-567
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               412-567
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               415-528
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               415-551
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               415-551
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               415-559
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               415-560
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               415-567
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               415-567
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               415-567
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               126, 56
               

               Conread position:
               415-586
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               12, 79
               

               Conread position:
               416-567
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               420-560
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               420-567
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               120, 109
               

               Conread position:
               420-567
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               422-567
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               422-579
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               426-560
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               435-560
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               435-567
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               435-567
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               437-560
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               437-560
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               78, 94
               

               Conread position:
               443-563
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               32, 0
               
Show alignments to all cow chromosomes.