Cow genome map
| Conread name: | Pig3-SRG8016H04 |
| Conread position: | 1-159 |
| Cow position: | chr5:58555366-58555197 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-169 |
| Cow position: | chr5:35513431-35513265 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 143, 58 |
| Conread position: | 1-174 |
| Cow position: | chr5:11769482-11769311 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 143, 54 |
| Conread position: | 1-193 |
| Cow position: | chr5:56434093-56433910 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 144, 54 |
| Conread position: | 2-144 |
| Cow position: | chr5:45854710-45854573 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 2-154 |
| Cow position: | chr5:39937326-39937180 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-154 |
| Cow position: | chr5:63939849-63939996 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 2-157 |
| Cow position: | chr5:28660440-28660293 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 2-158 |
| Cow position: | chr5:67583556-67583396 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 55, 129 |
| Conread position: | 2-160 |
| Cow position: | chr5:7057188-7057342 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 2-162 |
| Cow position: | chr5:31975741-31975576 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 103 |
| Conread position: | 2-165 |
| Cow position: | chr5:33273906-33273747 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 143, 49 |
| Conread position: | 2-167 |
| Cow position: | chr5:34116198-34116027 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 141 |
| Conread position: | 2-167 |
| Cow position: | chr5:50087977-50087817 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 2-168 |
| Cow position: | chr5:53855928-53855757 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 2-169 |
| Cow position: | chr5:3743535-3743372 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-169 |
| Cow position: | chr5:5760100-5760263 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 142, 52 |
| Conread position: | 2-169 |
| Cow position: | chr5:5856069-5855908 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-169 |
| Cow position: | chr5:6443934-6444104 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 2-169 |
| Cow position: | chr5:7177361-7177201 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 143, 55 |
| Conread position: | 2-169 |
| Cow position: | chr5:14903857-14904018 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 143, 28 |
| Conread position: | 2-169 |
| Cow position: | chr5:18091230-18091054 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-169 |
| Cow position: | chr5:18574391-18574225 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 77 |
| Conread position: | 2-169 |
| Cow position: | chr5:24915316-24915477 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-169 |
| Cow position: | chr5:26097499-26097339 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-169 |
| Cow position: | chr5:49821640-49821478 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-169 |
| Cow position: | chr5:53980543-53980704 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-170 |
| Cow position: | chr5:66972639-66972478 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 143, 31 |
| Conread position: | 2-174 |
| Cow position: | chr5:15770243-15770409 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-174 |
| Cow position: | chr5:19052582-19052747 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 143, 51 |
| Conread position: | 2-178 |
| Cow position: | chr5:21339051-21339229 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 82, 53 |
| Conread position: | 2-178 |
| Cow position: | chr5:31317210-31317041 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 112, 48 |
| Conread position: | 2-178 |
| Cow position: | chr5:51053439-51053608 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-179 |
| Cow position: | chr5:19294310-19294482 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 83, 52 |
| Conread position: | 2-182 |
| Cow position: | chr5:54311565-54311372 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 2-192 |
| Cow position: | chr5:35969749-35969564 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-194 |
| Cow position: | chr5:43839788-43839977 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 2-208 |
| Cow position: | chr5:19561237-19561435 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 143, 53 |
| Conread position: | 3-169 |
| Cow position: | chr5:63234615-63234779 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 142, 73 |
| Conread position: | 4-153 |
| Cow position: | chr5:14168053-14167908 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 4-157 |
| Cow position: | chr5:25035047-25035196 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 141, 52 |
| Conread position: | 4-168 |
| Cow position: | chr5:48061903-48062066 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 138, 51 |
| Conread position: | 4-169 |
| Cow position: | chr5:18062103-18062269 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 53, 74 |
| Conread position: | 4-169 |
| Cow position: | chr5:40122401-40122560 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 141, 51 |
| Conread position: | 4-169 |
| Cow position: | chr5:64843758-64843921 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 141, 51 |
| Conread position: | 5-169 |
| Cow position: | chr5:35246902-35247060 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 140, 50 |
| Conread position: | 18-160 |
| Cow position: | chr5:58519221-58519357 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 124, 32 |
| Conread position: | 18-167 |
| Cow position: | chr5:3677921-3677770 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 69 |
| Conread position: | 18-169 |
| Cow position: | chr5:15479327-15479176 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 127, 93 |
| Conread position: | 18-169 |
| Cow position: | chr5:62011878-62011733 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 127, 39 |
| Conread position: | 18-173 |
| Cow position: | chr5:17987700-17987849 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 127, 37 |
| Conread position: | 18-195 |
| Cow position: | chr5:20882420-20882598 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 155 |
| Conread position: | 19-208 |
| Cow position: | chr5:60126888-60126696 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 126, 36 |
| Conread position: | 29-167 |
| Cow position: | chr5:4336485-4336344 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 54-158 |
| Cow position: | chr5:43992490-43992385 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 54-191 |
| Cow position: | chr5:26476852-26476992 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 56-158 |
| Cow position: | chr5:29771692-29771589 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 68-169 |
| Cow position: | chr5:59627252-59627150 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 393-567 |
| Cow position: | chr5:55965634-55965805 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 394-560 |
| Cow position: | chr5:12902177-12902013 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 395-550 |
| Cow position: | chr5:24108797-24108954 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 396-567 |
| Cow position: | chr5:35208521-35208350 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 396-586 |
| Cow position: | chr5:56624257-56624447 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 122, 5 |
| Conread position: | 397-554 |
| Cow position: | chr5:11426981-11427133 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 127, 11 |
| Conread position: | 398-551 |
| Cow position: | chr5:59395917-59395767 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 398-560 |
| Cow position: | chr5:65140558-65140395 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 29, 133 |
| Conread position: | 398-560 |
| Cow position: | chr5:65760278-65760439 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 38, 27 |
| Conread position: | 398-567 |
| Cow position: | chr5:75711882-75712049 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 399-556 |
| Cow position: | chr5:36868992-36868835 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 401-551 |
| Cow position: | chr5:56428320-56428469 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 401-553 |
| Cow position: | chr5:51012255-51012103 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 130 |
| Conread position: | 401-560 |
| Cow position: | chr5:5760057-5760220 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 101, 14 |
| Conread position: | 401-560 |
| Cow position: | chr5:24464991-24464837 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 401-567 |
| Cow position: | chr5:45854755-45854586 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 401-581 |
| Cow position: | chr5:35235434-35235614 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 18, 37 |
| Conread position: | 402-567 |
| Cow position: | chr5:15770202-15770367 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 118, 32 |
| Conread position: | 402-582 |
| Cow position: | chr5:4280696-4280522 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 403-543 |
| Cow position: | chr5:13471359-13471221 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 404-579 |
| Cow position: | chr5:51053400-51053572 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 408-532 |
| Cow position: | chr5:41757859-41757735 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 408-536 |
| Cow position: | chr5:56578946-56578820 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 408-543 |
| Cow position: | chr5:45337174-45337308 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 408-556 |
| Cow position: | chr5:43434756-43434904 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 408-559 |
| Cow position: | chr5:35246861-35247013 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 408-559 |
| Cow position: | chr5:44868601-44868454 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 408-560 |
| Cow position: | chr5:52125147-52125299 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 59 |
| Conread position: | 408-560 |
| Cow position: | chr5:62011930-62011779 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 52 |
| Conread position: | 408-561 |
| Cow position: | chr5:34193380-34193234 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 408-567 |
| Cow position: | chr5:48061862-48062028 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 38, 129 |
| Conread position: | 408-567 |
| Cow position: | chr5:50101132-50101285 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 408-567 |
| Cow position: | chr5:56643316-56643156 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 102 |
| Conread position: | 408-567 |
| Cow position: | chr5:59662812-59662969 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 128, 29 |
| Conread position: | 408-579 |
| Cow position: | chr5:5016669-5016502 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 97 |
| Conread position: | 408-581 |
| Cow position: | chr5:40122364-40122535 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 409-552 |
| Cow position: | chr5:19752544-19752406 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 409-552 |
| Cow position: | chr5:72867298-72867154 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 410-560 |
| Cow position: | chr5:12566299-12566447 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 410-586 |
| Cow position: | chr5:16185622-16185450 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 411-560 |
| Cow position: | chr5:57526684-57526833 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 414-560 |
| Cow position: | chr5:39937355-39937211 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 414-567 |
| Cow position: | chr5:42064446-42064294 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 415-554 |
| Cow position: | chr5:41935421-41935555 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 415-554 |
| Cow position: | chr5:61593502-61593366 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 415-560 |
| Cow position: | chr5:26149274-26149130 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 415-560 |
| Cow position: | chr5:43858179-43858324 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 415-560 |
| Cow position: | chr5:61049572-61049428 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 415-567 |
| Cow position: | chr5:7057158-7057313 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 100, 115 |
| Conread position: | 415-567 |
| Cow position: | chr5:17999257-17999407 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 415-567 |
| Cow position: | chr5:18289357-18289211 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 415-575 |
| Cow position: | chr5:57755797-57755954 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 415-579 |
| Cow position: | chr5:33273937-33273770 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 415-581 |
| Cow position: | chr5:13270777-13270943 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 123, 24 |
| Conread position: | 415-586 |
| Cow position: | chr5:1678829-1678658 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 104, 114 |
| Conread position: | 416-559 |
| Cow position: | chr5:39036019-39035877 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 103, 10 |
| Conread position: | 417-560 |
| Cow position: | chr5:58693-58837 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 420-567 |
| Cow position: | chr5:19052557-19052703 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 420-567 |
| Cow position: | chr5:43611932-43611787 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 420-567 |
| Cow position: | chr5:53055325-53055472 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 421-560 |
| Cow position: | chr5:50723280-50723142 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 421-560 |
| Cow position: | chr5:63241212-63241073 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 421-584 |
| Cow position: | chr5:43839764-43839927 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 422-559 |
| Cow position: | chr5:38079606-38079467 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 82, 38 |
| Conread position: | 424-560 |
| Cow position: | chr5:17987663-17987799 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 425-567 |
| Cow position: | chr5:55783732-55783874 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 426-559 |
| Cow position: | chr5:56860671-56860539 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 434-586 |
| Cow position: | chr5:19561227-19561376 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 435-545 |
| Cow position: | chr5:54554966-54555076 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 435-551 |
| Cow position: | chr5:57399032-57399148 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 435-556 |
| Cow position: | chr5:50703828-50703949 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 435-567 |
| Cow position: | chr5:34347514-34347646 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 435-567 |
| Cow position: | chr5:55949459-55949590 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 103, 77 |
| Conread position: | 435-567 |
| Cow position: | chr5:57447445-57447577 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 437-560 |
| Cow position: | chr5:54712851-54712974 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 438-567 |
| Cow position: | chr5:14550366-14550495 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 442-567 |
| Cow position: | chr5:53980540-53980665 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 460-560 |
| Cow position: | chr5:2469016-2469116 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.