Cow genome map

Conread name: Pig3-SRG8020G16

Conread position: 184-304
Cow position: chr11:41295023-41295144 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 100

Conread position: 186-303
Cow position: chr11:1980068-1980187 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 187-279
Cow position: chr11:75874576-75874669 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 187-287
Cow position: chr11:23063844-23063945 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 18

Conread position: 187-299
Cow position: chr11:25968658-25968770 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 23

Conread position: 187-302
Cow position: chr11:55744665-55744549 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 187-302
Cow position: chr11:81143348-81143459 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 90

Conread position: 187-303
Cow position: chr11:28092648-28092530 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 187-303
Cow position: chr11:35732887-35733003 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 90

Conread position: 187-303
Cow position: chr11:44176789-44176676 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 55

Conread position: 187-303
Cow position: chr11:62102249-62102367 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 187-303
Cow position: chr11:63849753-63849871 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 187-303
Cow position: chr11:71481828-71481945 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 187-304
Cow position: chr11:17889531-17889649 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 187-326
Cow position: chr11:47784975-47784830 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 41, 18

Conread position: 188-294
Cow position: chr11:58186067-58185960 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 93
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 188-303
Cow position: chr11:30111807-30111685 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 188-317
Cow position: chr11:57874003-57873876 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 89

Conread position: 190-284
Cow position: chr11:36128684-36128586 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 190-285
Cow position: chr11:47904429-47904333 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 190-303
Cow position: chr11:25620197-25620310 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 84

Conread position: 190-303
Cow position: chr11:68592211-68592098 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 15

Conread position: 191-298
Cow position: chr11:16315066-16314958 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 191-303
Cow position: chr11:22102566-22102679 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 191-303
Cow position: chr11:63695651-63695760 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 20

Conread position: 192-276
Cow position: chr11:42083644-42083559 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 192-294
Cow position: chr11:46784654-46784551 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 192-303
Cow position: chr11:7928868-7928754 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 36

Conread position: 192-303
Cow position: chr11:27404880-27404994 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 192-303
Cow position: chr11:28078680-28078574 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 73

Conread position: 192-303
Cow position: chr11:70273652-70273541 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 192-303
Cow position: chr11:74152558-74152674 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 193-302
Cow position: chr11:20823687-20823799 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 193-303
Cow position: chr11:26057457-26057570 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 193-349
Cow position: chr11:53512317-53512157 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 31, 125

Conread position: 194-305
Cow position: chr11:49396337-49396447 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 70

Conread position: 195-300
Cow position: chr11:67600966-67600858 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 195-303
Cow position: chr11:81244074-81244183 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 195-303
Cow position: chr11:85186340-85186447 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 195-326
Cow position: chr11:81175786-81175653 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 33, 93

Conread position: 196-304
Cow position: chr11:53460885-53460777 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 32, 99

Conread position: 198-284
Cow position: chr11:8419745-8419832 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 198-284
Cow position: chr11:37982362-37982450 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 81
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 199-284
Cow position: chr11:48932405-48932491 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 79
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 199-304
Cow position: chr11:41278371-41278265 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 425-603
Cow position: chr11:38577640-38577817 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 116

Conread position: 429-602
Cow position: chr11:17831089-17831262 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 114, 130

Conread position: 444-604
Cow position: chr11:53778735-53778573 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 133
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 128

Conread position: 456-604
Cow position: chr11:18785772-18785912 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 456-605
Cow position: chr11:9221625-9221770 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 108

Conread position: 461-606
Cow position: chr11:12111358-12111498 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 463-606
Cow position: chr11:48512262-48512119 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 81, 107

Conread position: 464-604
Cow position: chr11:14466389-14466530 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 107

Conread position: 464-604
Cow position: chr11:84890620-84890760 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 56

Conread position: 464-604
Cow position: chr11:84977260-84977402 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 41, 108

Conread position: 464-605
Cow position: chr11:49149147-49148995 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 464-605
Cow position: chr11:56654655-56654511 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 109

Conread position: 464-606
Cow position: chr11:27565430-27565288 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 11, 60

Conread position: 464-606
Cow position: chr11:50073035-50072892 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 78, 107

Conread position: 464-606
Cow position: chr11:62754220-62754364 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 108

Conread position: 464-606
Cow position: chr11:65607591-65607737 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 465-603
Cow position: chr11:33753815-33753947 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 117
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 21, 35

Conread position: 465-605
Cow position: chr11:41313560-41313701 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 81, 106

Conread position: 465-606
Cow position: chr11:6233783-6233925 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 119
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 81, 106

Conread position: 465-606
Cow position: chr11:16320380-16320241 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 79, 57

Conread position: 465-606
Cow position: chr11:58588441-58588301 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 78, 57

Conread position: 466-602
Cow position: chr11:62155734-62155597 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 78, 105

Conread position: 466-603
Cow position: chr11:15373935-15373796 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 27

Conread position: 466-604
Cow position: chr11:2084239-2084100 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 78, 105

Conread position: 466-604
Cow position: chr11:23232424-23232559 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 78, 52

Conread position: 466-604
Cow position: chr11:52690426-52690563 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 81, 16

Conread position: 466-605
Cow position: chr11:8988136-8988274 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 81, 21

Conread position: 466-605
Cow position: chr11:50472412-50472273 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 105

Conread position: 466-606
Cow position: chr11:1362372-1362513 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 105

Conread position: 466-606
Cow position: chr11:4652877-4653018 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 81, 105

Conread position: 466-606
Cow position: chr11:7590284-7590147 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 466-606
Cow position: chr11:7924498-7924634 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 80, 60

Conread position: 466-606
Cow position: chr11:13500111-13499972 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 122
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 88, 80

Conread position: 466-606
Cow position: chr11:13592831-13592690 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 78, 105

Conread position: 466-606
Cow position: chr11:18086252-18086385 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 466-606
Cow position: chr11:19247104-19247244 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 77, 106

Conread position: 466-606
Cow position: chr11:22747235-22747373 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 466-606
Cow position: chr11:30925250-30925111 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 36

Conread position: 466-606
Cow position: chr11:33311073-33310928 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 123
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 58, 109

Conread position: 466-606
Cow position: chr11:33345541-33345400 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 80, 108

Conread position: 466-606
Cow position: chr11:36658728-36658864 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 466-606
Cow position: chr11:53510407-53510545 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 466-606
Cow position: chr11:71492766-71492905 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 466-606
Cow position: chr11:71807471-71807614 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 66, 101

Conread position: 466-606
Cow position: chr11:83230305-83230445 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 81, 100

Conread position: 466-606
Cow position: chr11:84385543-84385682 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 80, 97

Conread position: 467-602
Cow position: chr11:63482335-63482467 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 467-603
Cow position: chr11:41985951-41986088 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 77, 104

Conread position: 467-605
Cow position: chr11:42043902-42044036 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 467-606
Cow position: chr11:51729381-51729241 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 76, 104

Conread position: 467-606
Cow position: chr11:82289673-82289537 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 472-603
Cow position: chr11:21438298-21438166 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 77, 99

Conread position: 474-606
Cow position: chr11:55333997-55333864 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 69, 97

Conread position: 474-606
Cow position: chr11:64638438-64638570 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 82, 91

Conread position: 474-606
Cow position: chr11:77013868-77013739 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 476-606
Cow position: chr11:34106584-34106715 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 114
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 68, 95

Conread position: 478-606
Cow position: chr11:38874320-38874447 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 6, 19

Conread position: 480-606
Cow position: chr11:52983757-52983630 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 108
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 67, 91

Conread position: 493-606
Cow position: chr11:70273375-70273261 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 51, 79

Conread position: 499-606
Cow position: chr11:65624731-65624838 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 71

Show alignments to all cow chromosomes.