Cow genome map

Conread name: Pig3-SRG8020G16

Conread position: 183-302
Cow position: chr15:20459438-20459318 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 186-303
Cow position: chr15:40844747-40844629 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 114

Conread position: 186-303
Cow position: chr15:42142749-42142867 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 186-303
Cow position: chr15:52791816-52791934 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 103
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 187-298
Cow position: chr15:33784947-33784839 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 187-301
Cow position: chr15:4418525-4418410 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 187-302
Cow position: chr15:21893655-21893769 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 92

Conread position: 187-303
Cow position: chr15:15154176-15154292 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 78, 41

Conread position: 187-303
Cow position: chr15:34284531-34284420 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 41, 26

Conread position: 187-303
Cow position: chr15:36539822-36539935 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 23

Conread position: 188-284
Cow position: chr15:2140767-2140864 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 190-287
Cow position: chr15:24124603-24124701 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 190-303
Cow position: chr15:19554045-19553933 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 15

Conread position: 190-303
Cow position: chr15:43626344-43626460 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 190-303
Cow position: chr15:52728574-52728458 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 15

Conread position: 190-326
Cow position: chr15:17084084-17084225 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 191-303
Cow position: chr15:25208878-25208766 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 37, 98

Conread position: 191-303
Cow position: chr15:44119588-44119476 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 54

Conread position: 192-279
Cow position: chr15:22531555-22531643 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 192-302
Cow position: chr15:40562801-40562692 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 83

Conread position: 192-303
Cow position: chr15:20566010-20566122 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 192-303
Cow position: chr15:36846305-36846193 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 192-319
Cow position: chr15:38827433-38827305 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 84

Conread position: 193-302
Cow position: chr15:32022434-32022323 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 193-303
Cow position: chr15:11996145-11996035 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 94

Conread position: 193-303
Cow position: chr15:12722967-12723080 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 193-304
Cow position: chr15:15147326-15147213 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 194-287
Cow position: chr15:10737896-10737802 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 85
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 194-303
Cow position: chr15:28098996-28099103 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 194-304
Cow position: chr15:4500582-4500695 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 195-326
Cow position: chr15:21389309-21389175 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 124

Conread position: 196-284
Cow position: chr15:4534459-4534549 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 196-304
Cow position: chr15:12045655-12045546 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 100

Conread position: 197-284
Cow position: chr15:16911913-16911825 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 197-303
Cow position: chr15:22938880-22938771 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 198-302
Cow position: chr15:33729773-33729880 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 199-303
Cow position: chr15:20649454-20649559 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 200-302
Cow position: chr15:23572799-23572696 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 200-303
Cow position: chr15:27975983-27975880 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 28, 13

Conread position: 200-341
Cow position: chr15:31929008-31928866 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 28, 87

Conread position: 204-303
Cow position: chr15:12913605-12913507 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 58

Conread position: 213-303
Cow position: chr15:9465577-9465668 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 438-604
Cow position: chr15:6272938-6272775 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 111, 27

Conread position: 464-602
Cow position: chr15:5726299-5726438 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 117
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 83, 107

Conread position: 464-604
Cow position: chr15:1297713-1297854 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 121
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 80, 107

Conread position: 465-606
Cow position: chr15:795047-794904 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 107

Conread position: 465-606
Cow position: chr15:20422803-20422665 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 465-606
Cow position: chr15:43114745-43114610 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 104, 66

Conread position: 466-603
Cow position: chr15:12870888-12870750 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 83, 105

Conread position: 466-603
Cow position: chr15:31928920-31928782 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 81, 105

Conread position: 466-604
Cow position: chr15:4418423-4418285 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 16

Conread position: 466-604
Cow position: chr15:21941869-21941731 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 80, 66

Conread position: 466-604
Cow position: chr15:30981916-30982054 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 82, 104

Conread position: 466-605
Cow position: chr15:20534474-20534334 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 78, 105

Conread position: 466-605
Cow position: chr15:23719507-23719367 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 81, 103

Conread position: 466-605
Cow position: chr15:24797830-24797694 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 34

Conread position: 466-605
Cow position: chr15:27900534-27900395 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 95

Conread position: 466-605
Cow position: chr15:35441102-35440966 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 83, 0

Conread position: 466-605
Cow position: chr15:49273935-49274069 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 466-606
Cow position: chr15:1284238-1284389 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 115

Conread position: 466-606
Cow position: chr15:1330127-1329986 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 77, 106

Conread position: 466-606
Cow position: chr15:2141327-2141186 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 81, 105

Conread position: 466-606
Cow position: chr15:6128987-6128850 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 78, 31

Conread position: 466-606
Cow position: chr15:14176523-14176382 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 124
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 78, 105

Conread position: 466-606
Cow position: chr15:21821948-21821807 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 121
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 77, 105

Conread position: 466-606
Cow position: chr15:26912096-26911959 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 466-606
Cow position: chr15:29541854-29541994 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 78, 16

Conread position: 466-606
Cow position: chr15:32324229-32324091 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 117
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 466-606
Cow position: chr15:36388267-36388408 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 122
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 80, 105

Conread position: 466-606
Cow position: chr15:38652624-38652484 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 78, 37

Conread position: 466-606
Cow position: chr15:38827348-38827207 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 81, 105

Conread position: 466-606
Cow position: chr15:41527996-41527859 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 88, 0

Conread position: 466-606
Cow position: chr15:44658339-44658476 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 78, 31

Conread position: 467-602
Cow position: chr15:36793517-36793381 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 104

Conread position: 467-603
Cow position: chr15:21389187-21389053 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 114
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 78, 0

Conread position: 467-604
Cow position: chr15:19553947-19553806 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 467-605
Cow position: chr15:17100732-17100594 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 82, 72

Conread position: 467-605
Cow position: chr15:41000093-40999955 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 89, 103

Conread position: 467-606
Cow position: chr15:21893756-21893895 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 118
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 80, 103

Conread position: 467-606
Cow position: chr15:22984555-22984691 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 76, 32

Conread position: 468-603
Cow position: chr15:31560410-31560283 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 468-606
Cow position: chr15:26573358-26573496 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 76, 19

Conread position: 468-606
Cow position: chr15:31637279-31637418 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 79, 103

Conread position: 468-606
Cow position: chr15:34284433-34284293 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 104

Conread position: 474-606
Cow position: chr15:10231766-10231633 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 97

Conread position: 475-606
Cow position: chr15:23768272-23768140 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 69, 96

Conread position: 476-606
Cow position: chr15:50322580-50322711 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 73, 95

Conread position: 487-606
Cow position: chr15:38845898-38846018 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 57, 84

Conread position: 493-606
Cow position: chr15:225801-225687 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 78

Show alignments to all cow chromosomes.