Cow genome map

Conread name: Pig3-SRG8020G16

Conread position: 180-303
Cow position: chr18:15340311-15340429 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 183-303
Cow position: chr18:9974145-9974264 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 6, 96

Conread position: 184-284
Cow position: chr18:54928133-54928236 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 186-304
Cow position: chr18:641133-641250 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 93

Conread position: 187-273
Cow position: chr18:35887539-35887452 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 187-284
Cow position: chr18:47247800-47247705 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 41, 60

Conread position: 187-297
Cow position: chr18:23026849-23026959 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 79

Conread position: 187-302
Cow position: chr18:21969622-21969739 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 103

Conread position: 187-303
Cow position: chr18:32960258-32960142 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 90

Conread position: 187-303
Cow position: chr18:52251673-52251792 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 187-304
Cow position: chr18:7965411-7965293 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 187-304
Cow position: chr18:51178534-51178652 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 187-333
Cow position: chr18:2773208-2773358 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 188-287
Cow position: chr18:42978454-42978554 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 190-304
Cow position: chr18:31724701-31724814 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 62

Conread position: 191-301
Cow position: chr18:37160423-37160534 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 192-303
Cow position: chr18:7956323-7956213 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 192-303
Cow position: chr18:39860604-39860715 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 95

Conread position: 193-284
Cow position: chr18:24821114-24821206 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 193-301
Cow position: chr18:43057066-43056957 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 193-303
Cow position: chr18:8208250-8208360 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 95

Conread position: 194-287
Cow position: chr18:53039021-53038927 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 194-303
Cow position: chr18:39662953-39662842 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 195-293
Cow position: chr18:47868767-47868668 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 195-294
Cow position: chr18:9846247-9846348 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 195-303
Cow position: chr18:2097053-2097163 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 195-303
Cow position: chr18:11867509-11867405 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 82

Conread position: 195-304
Cow position: chr18:3158412-3158519 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 94

Conread position: 196-303
Cow position: chr18:19961966-19962079 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 196-303
Cow position: chr18:30341012-30341119 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 85

Conread position: 196-303
Cow position: chr18:40028394-40028284 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 196-307
Cow position: chr18:19272703-19272818 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 199-303
Cow position: chr18:37690318-37690215 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 78

Conread position: 199-303
Cow position: chr18:41703001-41702899 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 64

Conread position: 200-303
Cow position: chr18:17390824-17390929 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 213-302
Cow position: chr18:35012123-35012215 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 452-606
Cow position: chr18:47693160-47693005 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 120

Conread position: 460-604
Cow position: chr18:4556083-4556225 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 85, 0

Conread position: 464-605
Cow position: chr18:24976975-24977121 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 88

Conread position: 464-606
Cow position: chr18:43555442-43555585 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 120
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 79, 107

Conread position: 465-603
Cow position: chr18:11233493-11233358 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 37

Conread position: 465-603
Cow position: chr18:22170699-22170560 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 106

Conread position: 465-603
Cow position: chr18:23653037-23653181 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 465-605
Cow position: chr18:52855136-52854995 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 82, 106

Conread position: 466-600
Cow position: chr18:4203850-4203983 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 81, 70

Conread position: 466-600
Cow position: chr18:27388663-27388529 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 117
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 79, 39

Conread position: 466-600
Cow position: chr18:51867467-51867604 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 466-602
Cow position: chr18:3044523-3044392 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 19, 79

Conread position: 466-602
Cow position: chr18:37023470-37023607 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 114
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 78, 105

Conread position: 466-603
Cow position: chr18:47525488-47525350 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 78, 105

Conread position: 466-605
Cow position: chr18:1144106-1144243 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 73, 36

Conread position: 466-605
Cow position: chr18:2549223-2549363 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 78, 105

Conread position: 466-605
Cow position: chr18:5647893-5647753 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 81, 105

Conread position: 466-605
Cow position: chr18:19896371-19896511 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 77, 105

Conread position: 466-605
Cow position: chr18:40047421-40047558 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 80, 21

Conread position: 466-605
Cow position: chr18:43020324-43020462 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 88, 81

Conread position: 466-605
Cow position: chr18:47125320-47125460 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 105

Conread position: 466-605
Cow position: chr18:52251777-52251917 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 120
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 80, 105

Conread position: 466-605
Cow position: chr18:56159541-56159402 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 78, 49

Conread position: 466-606
Cow position: chr18:3211958-3211817 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 80, 105

Conread position: 466-606
Cow position: chr18:6399556-6399693 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 466-606
Cow position: chr18:16997334-16997193 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 78, 105

Conread position: 466-606
Cow position: chr18:21192334-21192472 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 38

Conread position: 466-606
Cow position: chr18:24508151-24508297 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 466-606
Cow position: chr18:33157895-33157757 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 18

Conread position: 466-606
Cow position: chr18:48828695-48828835 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 45, 81

Conread position: 467-603
Cow position: chr18:51192661-51192798 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 118
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 77, 104

Conread position: 467-604
Cow position: chr18:53642671-53642807 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 50

Conread position: 467-606
Cow position: chr18:11867419-11867276 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 54, 107

Conread position: 467-606
Cow position: chr18:51643287-51643426 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 118
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 77, 21

Conread position: 468-603
Cow position: chr18:32883379-32883249 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 468-604
Cow position: chr18:11377442-11377306 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 79, 60

Conread position: 468-604
Cow position: chr18:19883611-19883473 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 120
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 69, 104

Conread position: 468-605
Cow position: chr18:23162964-23162833 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 116
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 77, 0

Conread position: 468-605
Cow position: chr18:47417075-47416942 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 44

Conread position: 470-603
Cow position: chr18:18369286-18369417 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 471-606
Cow position: chr18:5078699-5078834 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 16

Conread position: 474-605
Cow position: chr18:21102704-21102832 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 475-603
Cow position: chr18:47565895-47565769 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 109
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 77, 0

Conread position: 477-604
Cow position: chr18:2863921-2864049 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 94

Conread position: 477-606
Cow position: chr18:1607318-1607193 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 35

Conread position: 478-606
Cow position: chr18:18649626-18649750 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 32

Conread position: 478-606
Cow position: chr18:56166049-56165921 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 72, 90

Conread position: 480-600
Cow position: chr18:15025741-15025618 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 93

Conread position: 483-604
Cow position: chr18:31125165-31125283 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 485-606
Cow position: chr18:49659822-49659943 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 45, 62

Conread position: 492-606
Cow position: chr18:40759261-40759146 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 79

Show alignments to all cow chromosomes.