Cow genome map

Conread name: Pig3-SRG8020G16

Conread position: 186-301
Cow position: chr19:12760898-12761014 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 186-302
Cow position: chr19:45466125-45466009 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 102

Conread position: 186-303
Cow position: chr19:41497439-41497559 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 29

Conread position: 186-303
Cow position: chr19:46822909-46822795 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 42, 17

Conread position: 186-303
Cow position: chr19:54988519-54988635 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 186-335
Cow position: chr19:24068077-24068229 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 131

Conread position: 187-284
Cow position: chr19:52621647-52621743 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 41, 21

Conread position: 187-287
Cow position: chr19:11424081-11424182 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 70

Conread position: 187-296
Cow position: chr19:18344247-18344357 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 187-303
Cow position: chr19:20092761-20092871 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 187-303
Cow position: chr19:30007387-30007272 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 42

Conread position: 187-304
Cow position: chr19:729547-729661 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 103, 41

Conread position: 187-333
Cow position: chr19:33655091-33654946 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 125, 41

Conread position: 188-326
Cow position: chr19:8864943-8864803 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 189-304
Cow position: chr19:5912757-5912874 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 189-304
Cow position: chr19:7558745-7558629 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 190-284
Cow position: chr19:29471809-29471715 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 33

Conread position: 190-300
Cow position: chr19:33931579-33931693 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 190-303
Cow position: chr19:2589713-2589602 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 192-303
Cow position: chr19:11211078-11211191 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 192-303
Cow position: chr19:35246141-35246029 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 192-303
Cow position: chr19:38411066-38410955 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 40

Conread position: 192-303
Cow position: chr19:43292529-43292417 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 192-321
Cow position: chr19:17355055-17354924 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 192-328
Cow position: chr19:48729036-48729173 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 85

Conread position: 192-359
Cow position: chr19:38717137-38717312 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 167

Conread position: 193-303
Cow position: chr19:34166563-34166454 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 49

Conread position: 193-303
Cow position: chr19:37466866-37466974 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 83

Conread position: 193-304
Cow position: chr19:27968499-27968610 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 63

Conread position: 194-278
Cow position: chr19:25825907-25825822 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 77
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 194-303
Cow position: chr19:16686788-16686897 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 48

Conread position: 194-303
Cow position: chr19:52356446-52356339 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 35, 93

Conread position: 196-345
Cow position: chr19:24220314-24220462 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 81

Conread position: 197-308
Cow position: chr19:51073037-51072925 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 91

Conread position: 438-602
Cow position: chr19:35233529-35233688 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 64

Conread position: 463-606
Cow position: chr19:10081180-10081036 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 84, 108

Conread position: 464-604
Cow position: chr19:6531989-6531850 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 25

Conread position: 464-605
Cow position: chr19:21176637-21176779 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 119
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 79, 107

Conread position: 465-606
Cow position: chr19:6079263-6079397 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 465-606
Cow position: chr19:25652657-25652795 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 465-606
Cow position: chr19:26975964-26976106 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 78, 106

Conread position: 466-601
Cow position: chr19:7675336-7675200 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 78, 105

Conread position: 466-603
Cow position: chr19:51285741-51285604 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 16

Conread position: 466-604
Cow position: chr19:36845352-36845213 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 122
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 78, 105

Conread position: 466-604
Cow position: chr19:43647519-43647376 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 109

Conread position: 466-605
Cow position: chr19:1978283-1978134 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 466-605
Cow position: chr19:13121181-13121312 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 466-605
Cow position: chr19:23304388-23304526 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 80, 105

Conread position: 466-605
Cow position: chr19:35322034-35322173 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 104

Conread position: 466-606
Cow position: chr19:2220973-2221114 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 120
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 80, 105

Conread position: 466-606
Cow position: chr19:2224001-2224135 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 466-606
Cow position: chr19:11194660-11194801 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 105

Conread position: 466-606
Cow position: chr19:11443093-11442950 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 69, 107

Conread position: 466-606
Cow position: chr19:14253734-14253593 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 78, 105

Conread position: 466-606
Cow position: chr19:15092034-15092171 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 466-606
Cow position: chr19:16693929-16694071 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 466-606
Cow position: chr19:20622756-20622615 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 105

Conread position: 466-606
Cow position: chr19:21817065-21816928 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 466-606
Cow position: chr19:25673424-25673561 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 466-606
Cow position: chr19:30007287-30007153 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 20

Conread position: 466-606
Cow position: chr19:30886498-30886357 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 78, 108

Conread position: 466-606
Cow position: chr19:34819084-34819227 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 120
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 466-606
Cow position: chr19:39648974-39649115 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 466-606
Cow position: chr19:41024326-41024185 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 81, 105

Conread position: 466-606
Cow position: chr19:42887051-42886917 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 88, 56

Conread position: 466-606
Cow position: chr19:50682343-50682481 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 466-606
Cow position: chr19:52185663-52185805 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 106

Conread position: 466-606
Cow position: chr19:52750656-52750797 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 80, 105

Conread position: 466-606
Cow position: chr19:55957469-55957607 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 101

Conread position: 467-600
Cow position: chr19:54915590-54915725 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 8, 105

Conread position: 467-604
Cow position: chr19:729646-729779 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 467-604
Cow position: chr19:25526385-25526247 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 122
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 76, 106

Conread position: 467-604
Cow position: chr19:55590334-55590196 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 8, 104

Conread position: 467-605
Cow position: chr19:15362594-15362738 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 33, 109

Conread position: 467-605
Cow position: chr19:41695559-41695699 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 105

Conread position: 467-606
Cow position: chr19:25410746-25410881 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 467-606
Cow position: chr19:26167811-26167951 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 80, 104

Conread position: 468-604
Cow position: chr19:7404276-7404413 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 103

Conread position: 468-606
Cow position: chr19:42236128-42235989 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 76, 103

Conread position: 472-606
Cow position: chr19:12711779-12711914 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 99

Conread position: 472-606
Cow position: chr19:43190020-43189883 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 86

Conread position: 475-601
Cow position: chr19:47859223-47859349 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 69, 19

Conread position: 476-606
Cow position: chr19:31595393-31595262 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 75, 95

Conread position: 481-605
Cow position: chr19:2042330-2042455 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 91

Conread position: 486-603
Cow position: chr19:20092913-20093030 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 61, 84

Conread position: 492-606
Cow position: chr19:51400938-51401049 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.