Cow genome map
| Conread name: | Pig3-SRG8020G16 |
| Conread position: | 186-303 |
| Cow position: | chr20:28935385-28935504 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 186-303 |
| Cow position: | chr20:29755033-29754916 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 187-303 |
| Cow position: | chr20:20459847-20459730 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 187-303 |
| Cow position: | chr20:29990193-29990307 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 18, 27 |
| Conread position: | 187-303 |
| Cow position: | chr20:37358115-37357997 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 187-304 |
| Cow position: | chr20:12995738-12995854 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 103 |
| Conread position: | 187-304 |
| Cow position: | chr20:25021686-25021568 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 189-284 |
| Cow position: | chr20:21325578-21325482 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 190-303 |
| Cow position: | chr20:24000023-24000138 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 191-303 |
| Cow position: | chr20:9033965-9034078 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 191-304 |
| Cow position: | chr20:26561963-26562077 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 192-281 |
| Cow position: | chr20:24310691-24310781 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 192-303 |
| Cow position: | chr20:10200599-10200487 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 192-303 |
| Cow position: | chr20:17733303-17733418 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 193-303 |
| Cow position: | chr20:6054257-6054368 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 12, 55 |
| Conread position: | 193-303 |
| Cow position: | chr20:34097698-34097812 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 193-304 |
| Cow position: | chr20:11043211-11043322 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 193-304 |
| Cow position: | chr20:14460634-14460521 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 194-303 |
| Cow position: | chr20:14283172-14283061 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 194-310 |
| Cow position: | chr20:15847030-15846916 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 194-338 |
| Cow position: | chr20:14980259-14980400 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 83 |
| Conread position: | 195-292 |
| Cow position: | chr20:25865885-25865984 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 196-303 |
| Cow position: | chr20:5078523-5078413 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 32, 54 |
| Conread position: | 196-303 |
| Cow position: | chr20:8679414-8679522 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 196-304 |
| Cow position: | chr20:36842833-36842725 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 94 |
| Conread position: | 197-284 |
| Cow position: | chr20:7291615-7291703 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 77 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 197-302 |
| Cow position: | chr20:15760323-15760429 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 198-303 |
| Cow position: | chr20:34202886-34202776 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 198-304 |
| Cow position: | chr20:10052987-10052880 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 199-303 |
| Cow position: | chr20:34221725-34221618 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 199-348 |
| Cow position: | chr20:12126058-12126211 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 132 |
| Conread position: | 200-303 |
| Cow position: | chr20:4891876-4891978 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 28, 77 |
| Conread position: | 200-303 |
| Cow position: | chr20:7658983-7659088 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 205-302 |
| Cow position: | chr20:17524512-17524414 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 442-603 |
| Cow position: | chr20:21345614-21345447 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 456-603 |
| Cow position: | chr20:28955534-28955683 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 116 |
| Conread position: | 464-600 |
| Cow position: | chr20:9433745-9433608 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 82, 107 |
| Conread position: | 465-604 |
| Cow position: | chr20:10772362-10772223 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 72, 65 |
| Conread position: | 465-605 |
| Cow position: | chr20:34083871-34083733 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 22 |
| Conread position: | 466-600 |
| Cow position: | chr20:7441982-7442111 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 466-600 |
| Cow position: | chr20:11359476-11359610 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 78, 99 |
| Conread position: | 466-601 |
| Cow position: | chr20:9537288-9537159 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 466-602 |
| Cow position: | chr20:5365082-5364949 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 466-602 |
| Cow position: | chr20:35741924-35741787 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 80, 105 |
| Conread position: | 466-603 |
| Cow position: | chr20:13943914-13943783 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 466-604 |
| Cow position: | chr20:11481979-11482117 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 31 |
| Conread position: | 466-604 |
| Cow position: | chr20:14980350-14980492 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 466-604 |
| Cow position: | chr20:21428315-21428178 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 80, 26 |
| Conread position: | 466-604 |
| Cow position: | chr20:29845206-29845068 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 21 |
| Conread position: | 466-604 |
| Cow position: | chr20:34777336-34777197 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 81, 105 |
| Conread position: | 466-606 |
| Cow position: | chr20:3599242-3599380 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 80 |
| Conread position: | 466-606 |
| Cow position: | chr20:4334373-4334515 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 106 |
| Conread position: | 466-606 |
| Cow position: | chr20:4945098-4945236 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 77, 64 |
| Conread position: | 466-606 |
| Cow position: | chr20:5703628-5703486 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 55, 106 |
| Conread position: | 466-606 |
| Cow position: | chr20:5814722-5814582 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 80, 104 |
| Conread position: | 466-606 |
| Cow position: | chr20:6240365-6240505 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 54 |
| Conread position: | 466-606 |
| Cow position: | chr20:6372407-6372544 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 466-606 |
| Cow position: | chr20:6603197-6603058 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 80, 105 |
| Conread position: | 466-606 |
| Cow position: | chr20:12126148-12126289 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 80, 103 |
| Conread position: | 466-606 |
| Cow position: | chr20:16941132-16941272 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 78, 94 |
| Conread position: | 466-606 |
| Cow position: | chr20:17251873-17251733 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 80, 97 |
| Conread position: | 466-606 |
| Cow position: | chr20:20898434-20898575 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 102 |
| Conread position: | 466-606 |
| Cow position: | chr20:20967477-20967336 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 78, 105 |
| Conread position: | 466-606 |
| Cow position: | chr20:23590593-23590732 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 466-606 |
| Cow position: | chr20:34097797-34097941 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 466-606 |
| Cow position: | chr20:40782117-40781976 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 78, 106 |
| Conread position: | 467-604 |
| Cow position: | chr20:15565674-15565810 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 80, 57 |
| Conread position: | 467-604 |
| Cow position: | chr20:16492228-16492089 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 77, 105 |
| Conread position: | 467-605 |
| Cow position: | chr20:25953419-25953280 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 57, 11 |
| Conread position: | 467-606 |
| Cow position: | chr20:33067205-33067345 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 76, 104 |
| Conread position: | 468-606 |
| Cow position: | chr20:24711995-24711855 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 78, 104 |
| Conread position: | 469-606 |
| Cow position: | chr20:13025457-13025599 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 106 |
| Conread position: | 474-605 |
| Cow position: | chr20:14620153-14620287 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 41, 99 |
| Conread position: | 474-606 |
| Cow position: | chr20:14572216-14572350 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 73, 29 |
| Conread position: | 482-606 |
| Cow position: | chr20:12534605-12534726 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 488-606 |
| Cow position: | chr20:35797743-35797627 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 493-605 |
| Cow position: | chr20:34001261-34001373 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 51, 22 |
Show alignments to all cow chromosomes.