Cow genome map

Conread name: Pig3-SRG8020G16

Conread position: 172-303
Cow position: chr21:28882473-28882343 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 56, 33

Conread position: 185-303
Cow position: chr21:5345159-5345040 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 186-303
Cow position: chr21:6713247-6713361 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 80

Conread position: 187-292
Cow position: chr21:41216836-41216730 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 187-302
Cow position: chr21:34010120-34010235 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 76

Conread position: 187-303
Cow position: chr21:8430821-8430938 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 187-303
Cow position: chr21:30145357-30145472 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 94

Conread position: 187-304
Cow position: chr21:938299-938180 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 82

Conread position: 189-303
Cow position: chr21:22720841-22720724 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 190-284
Cow position: chr21:42841313-42841408 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 15

Conread position: 190-338
Cow position: chr21:6051778-6051629 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 40, 88

Conread position: 191-303
Cow position: chr21:30938393-30938504 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 79

Conread position: 191-303
Cow position: chr21:31278460-31278347 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 191-303
Cow position: chr21:44251569-44251681 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 192-284
Cow position: chr21:17615799-17615892 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 192-302
Cow position: chr21:17184189-17184080 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 36, 71

Conread position: 192-302
Cow position: chr21:27711962-27712074 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 192-303
Cow position: chr21:20260026-20260136 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 74

Conread position: 192-303
Cow position: chr21:37479319-37479431 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 192-324
Cow position: chr21:48242779-48242917 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 193-292
Cow position: chr21:2926870-2926973 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 193-303
Cow position: chr21:27677753-27677642 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 193-303
Cow position: chr21:28955889-28955782 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 82

Conread position: 193-303
Cow position: chr21:30970205-30970097 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 49

Conread position: 193-303
Cow position: chr21:42501322-42501212 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 84

Conread position: 194-281
Cow position: chr21:29011707-29011795 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 194-301
Cow position: chr21:13488824-13488716 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 194-304
Cow position: chr21:8986295-8986182 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 194-325
Cow position: chr21:6042058-6041924 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 34, 124

Conread position: 195-301
Cow position: chr21:14464854-14464747 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 196-303
Cow position: chr21:29418840-29418730 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 197-326
Cow position: chr21:43655968-43655839 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 89

Conread position: 198-327
Cow position: chr21:27744294-27744161 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 100

Conread position: 200-303
Cow position: chr21:46609740-46609842 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 86

Conread position: 424-605
Cow position: chr21:1764649-1764830 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 49

Conread position: 430-605
Cow position: chr21:26647802-26647971 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 58

Conread position: 451-606
Cow position: chr21:47363542-47363700 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 464-606
Cow position: chr21:6051682-6051539 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 83, 107

Conread position: 464-606
Cow position: chr21:31159576-31159438 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 121
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 68, 0

Conread position: 464-606
Cow position: chr21:44592030-44592173 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 82, 107

Conread position: 465-603
Cow position: chr21:38918376-38918243 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 465-604
Cow position: chr21:28924287-28924147 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 120
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 78, 106

Conread position: 465-605
Cow position: chr21:20165819-20165679 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 105

Conread position: 465-606
Cow position: chr21:12461788-12461931 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 107

Conread position: 465-606
Cow position: chr21:42384686-42384544 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 81, 106

Conread position: 466-602
Cow position: chr21:6758520-6758384 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 92, 104

Conread position: 466-602
Cow position: chr21:45473581-45473718 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 105

Conread position: 466-603
Cow position: chr21:10264209-10264072 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 26

Conread position: 466-603
Cow position: chr21:15584242-15584380 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 78, 105

Conread position: 466-603
Cow position: chr21:20153131-20152995 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 25

Conread position: 466-604
Cow position: chr21:7066205-7066343 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 49

Conread position: 466-604
Cow position: chr21:10004709-10004847 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 119
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 80, 70

Conread position: 466-604
Cow position: chr21:41610347-41610205 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 38, 108

Conread position: 466-604
Cow position: chr21:47713833-47713966 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 466-605
Cow position: chr21:713120-712979 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 65, 106

Conread position: 466-605
Cow position: chr21:6998124-6997977 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 466-605
Cow position: chr21:40589305-40589447 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 466-606
Cow position: chr21:396044-395904 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 120
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 78, 104

Conread position: 466-606
Cow position: chr21:734766-734630 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 61

Conread position: 466-606
Cow position: chr21:957847-957709 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 27

Conread position: 466-606
Cow position: chr21:3585191-3585332 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 81, 105

Conread position: 466-606
Cow position: chr21:7768615-7768474 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 80, 103

Conread position: 466-606
Cow position: chr21:8545846-8545982 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 466-606
Cow position: chr21:15544052-15544184 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 466-606
Cow position: chr21:16152618-16152476 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 466-606
Cow position: chr21:17642809-17642948 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 83, 16

Conread position: 466-606
Cow position: chr21:23568405-23568260 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 466-606
Cow position: chr21:24642689-24642557 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 81, 33

Conread position: 466-606
Cow position: chr21:27341418-27341555 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 466-606
Cow position: chr21:27677657-27677518 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 103, 78

Conread position: 466-606
Cow position: chr21:27863337-27863477 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 21

Conread position: 466-606
Cow position: chr21:28919351-28919487 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 46

Conread position: 466-606
Cow position: chr21:29014734-29014874 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 78, 106

Conread position: 466-606
Cow position: chr21:30119871-30119730 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 81, 105

Conread position: 466-606
Cow position: chr21:30231522-30231658 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 77, 35

Conread position: 466-606
Cow position: chr21:40266298-40266161 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 466-606
Cow position: chr21:41597988-41597847 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 80, 105

Conread position: 466-606
Cow position: chr21:42144999-42144862 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 81, 16

Conread position: 467-602
Cow position: chr21:41918065-41918202 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 21, 64

Conread position: 467-603
Cow position: chr21:13164035-13163898 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 79, 104

Conread position: 467-604
Cow position: chr21:20160852-20160714 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 119
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 76, 104

Conread position: 467-606
Cow position: chr21:33563179-33563044 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 467-606
Cow position: chr21:37706239-37706379 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 79, 104

Conread position: 467-606
Cow position: chr21:45920883-45921022 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 15

Conread position: 468-605
Cow position: chr21:41621300-41621162 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 103

Conread position: 468-605
Cow position: chr21:46132749-46132611 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 103

Conread position: 468-606
Cow position: chr21:17265825-17265965 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 17

Conread position: 468-606
Cow position: chr21:42413922-42414062 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 104

Conread position: 471-606
Cow position: chr21:1511461-1511329 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 471-606
Cow position: chr21:42841425-42841561 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 91

Conread position: 472-606
Cow position: chr21:19258989-19258858 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 473-605
Cow position: chr21:7221170-7221303 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 98

Conread position: 474-606
Cow position: chr21:21907265-21907392 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 474-606
Cow position: chr21:31279425-31279292 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 69, 97

Conread position: 475-602
Cow position: chr21:13584893-13585019 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 96

Conread position: 475-602
Cow position: chr21:38900941-38900814 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 45

Conread position: 477-601
Cow position: chr21:23460299-23460178 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 477-606
Cow position: chr21:36789962-36789831 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 95

Conread position: 478-606
Cow position: chr21:8231513-8231641 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 109
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 68, 42

Conread position: 494-604
Cow position: chr21:30606937-30607049 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 78

Conread position: 494-604
Cow position: chr21:34390826-34390937 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 50, 77

Conread position: 494-606
Cow position: chr21:40432594-40432481 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 50, 77

Conread position: 495-606
Cow position: chr21:43357108-43357218 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 62

Show alignments to all cow chromosomes.