Cow genome map

Conread name: Pig3-SRG8020G16

Conread position: 165-284
Cow position: chr23:4578800-4578917 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 15

Conread position: 166-303
Cow position: chr23:799428-799568 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 185-303
Cow position: chr23:9726320-9726441 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 187-296
Cow position: chr23:25726556-25726449 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 187-303
Cow position: chr23:7856977-7856860 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 187-303
Cow position: chr23:10676069-10675952 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 187-303
Cow position: chr23:30617261-30617378 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 187-304
Cow position: chr23:3890357-3890474 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 41, 108

Conread position: 189-303
Cow position: chr23:187392-187279 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 97

Conread position: 190-303
Cow position: chr23:19822255-19822368 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 15

Conread position: 192-301
Cow position: chr23:532901-533007 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 74

Conread position: 192-311
Cow position: chr23:34829120-34829238 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 37, 86

Conread position: 192-313
Cow position: chr23:19179159-19179284 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 37, 45

Conread position: 193-272
Cow position: chr23:8378832-8378912 (view UCSC Genome Browser custom track)
Alignm length: 81
Alignm identity: 74
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 193-286
Cow position: chr23:19274306-19274212 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 193-303
Cow position: chr23:307668-307556 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 193-303
Cow position: chr23:2471215-2471103 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 193-303
Cow position: chr23:27307957-27307846 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 193-303
Cow position: chr23:32621498-32621386 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 193-304
Cow position: chr23:20604478-20604594 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 193-326
Cow position: chr23:5436431-5436567 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 193-337
Cow position: chr23:16613396-16613543 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 12, 136

Conread position: 194-303
Cow position: chr23:22573698-22573808 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 194-339
Cow position: chr23:18822224-18822372 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 123

Conread position: 195-302
Cow position: chr23:9761044-9760931 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 195-302
Cow position: chr23:39813710-39813601 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 195-303
Cow position: chr23:1480849-1480740 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 196-304
Cow position: chr23:22530231-22530339 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 32, 67

Conread position: 196-338
Cow position: chr23:8698631-8698485 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 32, 122

Conread position: 197-303
Cow position: chr23:769336-769441 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 197-303
Cow position: chr23:4521675-4521784 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 197-303
Cow position: chr23:28529746-28529854 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 198-303
Cow position: chr23:25864490-25864597 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 199-284
Cow position: chr23:24479720-24479806 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 199-303
Cow position: chr23:2186859-2186964 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 199-303
Cow position: chr23:40737811-40737917 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 199-310
Cow position: chr23:1739660-1739548 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 200-302
Cow position: chr23:11081461-11081357 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 203-304
Cow position: chr23:1871737-1871837 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 25, 86

Conread position: 204-302
Cow position: chr23:39302892-39302793 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 455-606
Cow position: chr23:4726919-4726769 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 40

Conread position: 464-606
Cow position: chr23:14164277-14164423 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 96, 0

Conread position: 465-605
Cow position: chr23:13599457-13599318 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 89, 81

Conread position: 465-606
Cow position: chr23:1936526-1936668 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 81, 106

Conread position: 465-606
Cow position: chr23:6035547-6035411 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 465-606
Cow position: chr23:23904211-23904353 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 106

Conread position: 465-606
Cow position: chr23:24700968-24701105 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 465-606
Cow position: chr23:35503889-35503758 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 465-606
Cow position: chr23:38208842-38208701 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 78, 55

Conread position: 466-600
Cow position: chr23:25938274-25938406 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 466-601
Cow position: chr23:4104511-4104378 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 79, 0

Conread position: 466-601
Cow position: chr23:39083566-39083430 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 12

Conread position: 466-602
Cow position: chr23:6994867-6995004 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 105

Conread position: 466-603
Cow position: chr23:5162545-5162411 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 466-604
Cow position: chr23:3191009-3191148 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 105

Conread position: 466-604
Cow position: chr23:13946153-13946015 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 67, 104

Conread position: 466-604
Cow position: chr23:16582794-16582933 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 80, 105

Conread position: 466-605
Cow position: chr23:7574509-7574645 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 104

Conread position: 466-606
Cow position: chr23:38143-37996 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 466-606
Cow position: chr23:283277-283418 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 105

Conread position: 466-606
Cow position: chr23:4528763-4528902 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 110, 24

Conread position: 466-606
Cow position: chr23:4972881-4972741 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 80, 70

Conread position: 466-606
Cow position: chr23:21309297-21309437 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 121
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 77, 28

Conread position: 466-606
Cow position: chr23:26283838-26283699 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 81, 47

Conread position: 466-606
Cow position: chr23:33622034-33622175 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 105

Conread position: 466-606
Cow position: chr23:34356756-34356616 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 78, 49

Conread position: 466-606
Cow position: chr23:38455062-38455204 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 122
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 106

Conread position: 466-606
Cow position: chr23:39780870-39780729 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 105

Conread position: 467-600
Cow position: chr23:14569386-14569520 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 79, 104

Conread position: 467-602
Cow position: chr23:25864583-25864721 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 69, 18

Conread position: 467-605
Cow position: chr23:18402175-18402314 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 118
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 82, 104

Conread position: 467-606
Cow position: chr23:23409847-23409708 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 118
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 77, 69

Conread position: 468-597
Cow position: chr23:4241528-4241654 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 468-605
Cow position: chr23:360575-360714 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 62

Conread position: 470-601
Cow position: chr23:39775837-39775705 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 79, 29

Conread position: 472-606
Cow position: chr23:4562995-4562860 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 99

Conread position: 474-605
Cow position: chr23:12334317-12334186 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 73, 56

Conread position: 480-606
Cow position: chr23:3262396-3262522 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 71, 90

Conread position: 485-606
Cow position: chr23:38973944-38973825 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 492-606
Cow position: chr23:7696649-7696533 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 52, 79

Conread position: 507-606
Cow position: chr23:1921152-1921252 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 64

Show alignments to all cow chromosomes.