Cow genome map
| Conread name: | Pig3-SRG8020G16 |
| Conread position: | 186-284 |
| Cow position: | chr25:21894620-21894719 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 187-284 |
| Cow position: | chr25:15218369-15218271 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 187-303 |
| Cow position: | chr25:20008344-20008229 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 41, 90 |
| Conread position: | 187-304 |
| Cow position: | chr25:12755282-12755397 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 5 |
| Conread position: | 187-304 |
| Cow position: | chr25:26074766-26074884 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 18 |
| Conread position: | 188-304 |
| Cow position: | chr25:5808158-5808040 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 189-303 |
| Cow position: | chr25:15349699-15349812 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 8, 90 |
| Conread position: | 190-303 |
| Cow position: | chr25:26643019-26642903 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 192-284 |
| Cow position: | chr25:7554892-7554985 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 192-319 |
| Cow position: | chr25:16491302-16491179 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 36, 77 |
| Conread position: | 192-337 |
| Cow position: | chr25:2662599-2662457 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 36, 94 |
| Conread position: | 193-287 |
| Cow position: | chr25:14212621-14212717 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 193-303 |
| Cow position: | chr25:11957008-11956900 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 35, 84 |
| Conread position: | 193-303 |
| Cow position: | chr25:13565130-13565240 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 95 |
| Conread position: | 194-279 |
| Cow position: | chr25:25582108-25582022 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 77 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 197-303 |
| Cow position: | chr25:33272838-33272731 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 198-302 |
| Cow position: | chr25:15999351-15999456 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 30, 90 |
| Conread position: | 199-302 |
| Cow position: | chr25:1823893-1824000 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 205-314 |
| Cow position: | chr25:17144645-17144535 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 464-605 |
| Cow position: | chr25:18988496-18988361 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 82, 43 |
| Conread position: | 464-606 |
| Cow position: | chr25:9939148-9939286 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 464-606 |
| Cow position: | chr25:20069833-20069691 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 41, 87 |
| Conread position: | 465-603 |
| Cow position: | chr25:13503546-13503406 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 23, 108 |
| Conread position: | 465-606 |
| Cow position: | chr25:9269455-9269318 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 465-606 |
| Cow position: | chr25:26701138-26701000 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 465-606 |
| Cow position: | chr25:31762496-31762638 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 79, 106 |
| Conread position: | 466-602 |
| Cow position: | chr25:9615948-9615811 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 78, 105 |
| Conread position: | 466-602 |
| Cow position: | chr25:17474402-17474538 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 96, 104 |
| Conread position: | 466-603 |
| Cow position: | chr25:21267098-21266964 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 46 |
| Conread position: | 466-604 |
| Cow position: | chr25:17658722-17658583 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 80, 105 |
| Conread position: | 466-604 |
| Cow position: | chr25:20008244-20008104 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 81, 106 |
| Conread position: | 466-604 |
| Cow position: | chr25:36017644-36017514 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 466-605 |
| Cow position: | chr25:16867352-16867209 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 57, 108 |
| Conread position: | 466-605 |
| Cow position: | chr25:18905996-18905856 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 78, 105 |
| Conread position: | 466-605 |
| Cow position: | chr25:25716756-25716621 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 466-605 |
| Cow position: | chr25:26052013-26051873 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 92, 11 |
| Conread position: | 466-606 |
| Cow position: | chr25:61761-61620 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 78, 105 |
| Conread position: | 466-606 |
| Cow position: | chr25:6473976-6474117 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 80, 105 |
| Conread position: | 466-606 |
| Cow position: | chr25:11585629-11585488 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 77, 105 |
| Conread position: | 466-606 |
| Cow position: | chr25:13272680-13272540 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 81, 105 |
| Conread position: | 466-606 |
| Cow position: | chr25:22730939-22730799 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 81, 53 |
| Conread position: | 466-606 |
| Cow position: | chr25:26655018-26654881 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 466-606 |
| Cow position: | chr25:33311215-33311357 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 466-606 |
| Cow position: | chr25:33555716-33555577 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 83, 61 |
| Conread position: | 466-606 |
| Cow position: | chr25:35052511-35052653 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 466-606 |
| Cow position: | chr25:35090458-35090603 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 41 |
| Conread position: | 466-606 |
| Cow position: | chr25:35109158-35109299 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 78, 105 |
| Conread position: | 467-603 |
| Cow position: | chr25:36081985-36081850 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 467-606 |
| Cow position: | chr25:1838351-1838207 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 467-606 |
| Cow position: | chr25:26161079-26160935 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 72, 108 |
| Conread position: | 467-606 |
| Cow position: | chr25:30816999-30816859 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 79, 104 |
| Conread position: | 468-604 |
| Cow position: | chr25:23817731-23817868 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 103 |
| Conread position: | 468-606 |
| Cow position: | chr25:1823988-1824127 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 103 |
| Conread position: | 470-605 |
| Cow position: | chr25:5920187-5920052 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 77, 12 |
| Conread position: | 470-605 |
| Cow position: | chr25:30656542-30656675 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 474-604 |
| Cow position: | chr25:16064995-16064864 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 70, 97 |
| Conread position: | 476-605 |
| Cow position: | chr25:447165-447294 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 71, 9 |
| Conread position: | 486-606 |
| Cow position: | chr25:9349193-9349311 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 24 |
Show alignments to all cow chromosomes.