Cow genome map

Conread name: Pig3-SRG8020G16

Conread position: 168-284
Cow position: chr27:7213003-7212888 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 15

Conread position: 179-304
Cow position: chr27:20584733-20584606 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 10, 88

Conread position: 186-303
Cow position: chr27:24303685-24303805 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 19, 44

Conread position: 186-338
Cow position: chr27:24223699-24223846 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 144, 19

Conread position: 187-302
Cow position: chr27:22708741-22708857 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 187-303
Cow position: chr27:2592281-2592400 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 187-326
Cow position: chr27:9504298-9504439 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 18

Conread position: 188-299
Cow position: chr27:634681-634566 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 188-303
Cow position: chr27:11528674-11528789 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 40, 78

Conread position: 189-303
Cow position: chr27:21951234-21951120 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 100

Conread position: 190-284
Cow position: chr27:17927408-17927313 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 190-292
Cow position: chr27:1193556-1193453 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 190-303
Cow position: chr27:18435383-18435275 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 38, 85

Conread position: 191-303
Cow position: chr27:10979608-10979721 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 192-308
Cow position: chr27:19932814-19932932 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 192-310
Cow position: chr27:23128215-23128334 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 15

Conread position: 193-284
Cow position: chr27:28290592-28290684 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 81
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 193-303
Cow position: chr27:30914756-30914868 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 193-324
Cow position: chr27:14269581-14269447 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 193-326
Cow position: chr27:22181810-22181955 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 194-304
Cow position: chr27:2685189-2685299 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 96

Conread position: 195-304
Cow position: chr27:18749168-18749060 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 89

Conread position: 196-297
Cow position: chr27:11466763-11466661 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 198-303
Cow position: chr27:6751933-6752039 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 198-303
Cow position: chr27:31479029-31479136 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 199-302
Cow position: chr27:29877720-29877616 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 200-303
Cow position: chr27:26481440-26481335 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 464-603
Cow position: chr27:7935316-7935175 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 72, 108

Conread position: 464-606
Cow position: chr27:29319253-29319395 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 14

Conread position: 464-606
Cow position: chr27:30389456-30389313 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 80, 56

Conread position: 465-606
Cow position: chr27:15925188-15925329 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 79, 106

Conread position: 465-606
Cow position: chr27:21453252-21453110 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 81, 106

Conread position: 465-606
Cow position: chr27:22245469-22245610 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 60

Conread position: 466-600
Cow position: chr27:22454933-22454797 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 116
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 20, 106

Conread position: 466-603
Cow position: chr27:17918470-17918332 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 83, 105

Conread position: 466-604
Cow position: chr27:16965420-16965554 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 64, 104

Conread position: 466-604
Cow position: chr27:20584610-20584474 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 81, 16

Conread position: 466-604
Cow position: chr27:27438662-27438522 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 70

Conread position: 466-604
Cow position: chr27:31386788-31386648 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 466-605
Cow position: chr27:20045737-20045873 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 81

Conread position: 466-606
Cow position: chr27:1637092-1636951 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 80, 105

Conread position: 466-606
Cow position: chr27:2592385-2592527 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 119
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 80, 106

Conread position: 466-606
Cow position: chr27:14303581-14303722 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 93, 104

Conread position: 466-606
Cow position: chr27:15215070-15215213 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 108

Conread position: 466-606
Cow position: chr27:16088648-16088791 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 24

Conread position: 466-606
Cow position: chr27:16512328-16512187 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 105

Conread position: 466-606
Cow position: chr27:22559980-22559843 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 466-606
Cow position: chr27:23860009-23860145 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 113, 36

Conread position: 466-606
Cow position: chr27:23895268-23895404 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 103, 79

Conread position: 466-606
Cow position: chr27:26347768-26347631 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 466-606
Cow position: chr27:27641167-27641028 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 80, 21

Conread position: 467-604
Cow position: chr27:1291005-1290869 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 76, 15

Conread position: 467-606
Cow position: chr27:8790899-8790756 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 82, 104

Conread position: 467-606
Cow position: chr27:18435289-18435148 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 120
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 80, 104

Conread position: 467-606
Cow position: chr27:18922988-18922849 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 80, 101

Conread position: 467-606
Cow position: chr27:22423360-22423499 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 76, 104

Conread position: 467-606
Cow position: chr27:31017981-31017846 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 468-600
Cow position: chr27:1789293-1789161 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 78, 103

Conread position: 469-605
Cow position: chr27:4155845-4155979 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 74, 23

Conread position: 469-606
Cow position: chr27:10992203-10992337 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 115
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 77, 0

Conread position: 474-606
Cow position: chr27:11435469-11435338 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 28

Conread position: 475-604
Cow position: chr27:15643027-15643155 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 72, 45

Conread position: 475-605
Cow position: chr27:29831846-29831715 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 97

Conread position: 475-606
Cow position: chr27:18593125-18593253 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 486-605
Cow position: chr27:30868877-30868757 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 85

Conread position: 499-603
Cow position: chr27:28472656-28472762 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 65

Show alignments to all cow chromosomes.