Cow genome map

Conread name: Pig3-SRG8020G16

Conread position: 151-275
Cow position: chr4:49794889-49794765 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 77, 19

Conread position: 168-303
Cow position: chr4:6072828-6072964 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 178-310
Cow position: chr4:1985865-1985731 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 180-303
Cow position: chr4:22101048-22101174 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 186-301
Cow position: chr4:46656339-46656222 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 186-303
Cow position: chr4:8388874-8388991 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 74

Conread position: 186-303
Cow position: chr4:41900173-41900055 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 45

Conread position: 186-304
Cow position: chr4:19542355-19542234 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 187-302
Cow position: chr4:25802899-25802782 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 187-303
Cow position: chr4:43909969-43909852 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 187-303
Cow position: chr4:45629840-45629956 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 58

Conread position: 187-304
Cow position: chr4:45773670-45773552 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 187-304
Cow position: chr4:56410548-56410434 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 18

Conread position: 187-326
Cow position: chr4:45801722-45801581 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 112

Conread position: 187-326
Cow position: chr4:53941589-53941731 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 187-337
Cow position: chr4:18756640-18756490 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 125, 18

Conread position: 188-303
Cow position: chr4:36058250-36058132 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 189-326
Cow position: chr4:4516667-4516807 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 191-297
Cow position: chr4:53169373-53169480 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 191-302
Cow position: chr4:20315295-20315411 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 191-303
Cow position: chr4:19199083-19199196 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 191-341
Cow position: chr4:30691202-30691055 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 73

Conread position: 192-292
Cow position: chr4:27521759-27521658 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 192-303
Cow position: chr4:4647599-4647490 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 21

Conread position: 192-303
Cow position: chr4:20147384-20147274 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 85

Conread position: 192-303
Cow position: chr4:43436466-43436353 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 193-287
Cow position: chr4:45909762-45909857 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 193-297
Cow position: chr4:29317870-29317975 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 95, 30

Conread position: 193-302
Cow position: chr4:32458657-32458768 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 193-302
Cow position: chr4:39010251-39010140 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 21

Conread position: 193-303
Cow position: chr4:51617798-51617908 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 73

Conread position: 193-304
Cow position: chr4:47029897-47029785 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 193-333
Cow position: chr4:43709957-43710101 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 194-303
Cow position: chr4:19102679-19102791 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 194-303
Cow position: chr4:40995931-40995821 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 194-303
Cow position: chr4:56853050-56852938 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 34

Conread position: 194-303
Cow position: chr4:57568868-57568978 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 17

Conread position: 195-303
Cow position: chr4:9269702-9269809 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 68

Conread position: 195-303
Cow position: chr4:30769229-30769125 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 85

Conread position: 196-303
Cow position: chr4:59001943-59002049 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 69

Conread position: 196-303
Cow position: chr4:63596567-63596455 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 196-303
Cow position: chr4:66547568-66547677 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 196-326
Cow position: chr4:14020694-14020562 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 199-303
Cow position: chr4:46234970-46235074 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 96

Conread position: 200-330
Cow position: chr4:19463739-19463608 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 103

Conread position: 423-605
Cow position: chr4:19407849-19408031 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 44, 15

Conread position: 456-606
Cow position: chr4:34369333-34369485 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 11, 116

Conread position: 464-605
Cow position: chr4:20147291-20147149 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 92, 107

Conread position: 464-605
Cow position: chr4:35638795-35638937 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 86, 107

Conread position: 465-604
Cow position: chr4:508802-508942 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 118
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 79, 106

Conread position: 465-605
Cow position: chr4:37935178-37935319 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 81, 106

Conread position: 465-606
Cow position: chr4:12135819-12135962 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 120
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 82, 106

Conread position: 465-606
Cow position: chr4:37732376-37732518 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 78, 106

Conread position: 466-600
Cow position: chr4:19102776-19102910 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 105

Conread position: 466-601
Cow position: chr4:12127533-12127669 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 117
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 78, 105

Conread position: 466-602
Cow position: chr4:13941562-13941429 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 466-602
Cow position: chr4:61313107-61313244 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 78, 105

Conread position: 466-603
Cow position: chr4:19542238-19542106 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 466-603
Cow position: chr4:31505918-31506056 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 45

Conread position: 466-603
Cow position: chr4:45775232-45775370 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 105

Conread position: 466-604
Cow position: chr4:15236738-15236603 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 466-604
Cow position: chr4:32726330-32726191 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 105

Conread position: 466-604
Cow position: chr4:45583017-45583152 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 466-605
Cow position: chr4:19098578-19098435 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 120
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 466-605
Cow position: chr4:29805268-29805404 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 466-605
Cow position: chr4:32693894-32693753 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 106

Conread position: 466-605
Cow position: chr4:44772937-44773077 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 80, 105

Conread position: 466-605
Cow position: chr4:44838789-44838926 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 77, 16

Conread position: 466-605
Cow position: chr4:45862518-45862383 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 46

Conread position: 466-605
Cow position: chr4:45909872-45910011 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 78, 16

Conread position: 466-606
Cow position: chr4:2602336-2602200 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 71, 26

Conread position: 466-606
Cow position: chr4:8705100-8704957 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 466-606
Cow position: chr4:23450988-23451130 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 106

Conread position: 466-606
Cow position: chr4:28836640-28836501 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 78, 36

Conread position: 466-606
Cow position: chr4:33181650-33181509 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 78, 105

Conread position: 466-606
Cow position: chr4:34383236-34383376 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 84, 104

Conread position: 466-606
Cow position: chr4:36893465-36893324 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 81, 105

Conread position: 466-606
Cow position: chr4:38946321-38946176 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 466-606
Cow position: chr4:44782480-44782340 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 121
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 84, 104

Conread position: 466-606
Cow position: chr4:46136855-46136715 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 80, 19

Conread position: 466-606
Cow position: chr4:48104463-48104604 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 79, 105

Conread position: 466-606
Cow position: chr4:50687760-50687896 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 80, 46

Conread position: 466-606
Cow position: chr4:54920984-54921122 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 84

Conread position: 466-606
Cow position: chr4:55395867-55395728 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 53

Conread position: 466-606
Cow position: chr4:59378015-59377874 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 80, 105

Conread position: 466-606
Cow position: chr4:69543288-69543147 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 106

Conread position: 467-604
Cow position: chr4:11496545-11496679 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 8, 28

Conread position: 467-605
Cow position: chr4:12004319-12004184 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 116
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 467-606
Cow position: chr4:12591109-12591249 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 121
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 77, 104

Conread position: 467-606
Cow position: chr4:63349386-63349520 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 35

Conread position: 467-606
Cow position: chr4:65175040-65175180 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 121
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 77, 105

Conread position: 468-606
Cow position: chr4:3268261-3268398 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 468-606
Cow position: chr4:48902521-48902660 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 76, 103

Conread position: 468-606
Cow position: chr4:65650030-65650165 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 78, 103

Conread position: 476-602
Cow position: chr4:48322132-48322002 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 98

Conread position: 478-606
Cow position: chr4:19314107-19313977 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 8, 94

Conread position: 487-604
Cow position: chr4:27632529-27632414 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 60

Show alignments to all cow chromosomes.