Cow genome map

Conread name: Pig3-SRG8020G16

Conread position: 174-303
Cow position: chr7:53834320-53834451 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 185-272
Cow position: chr7:69066935-69066847 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 186-303
Cow position: chr7:16285318-16285438 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 186-303
Cow position: chr7:30012084-30011972 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 79

Conread position: 186-303
Cow position: chr7:30290688-30290805 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 113

Conread position: 187-301
Cow position: chr7:14497537-14497423 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 187-302
Cow position: chr7:10945048-10944930 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 187-303
Cow position: chr7:9068341-9068458 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 187-303
Cow position: chr7:25859948-25860066 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 187-303
Cow position: chr7:43450797-43450681 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 41, 36

Conread position: 187-303
Cow position: chr7:53271078-53270962 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 23

Conread position: 187-303
Cow position: chr7:58800425-58800308 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 100

Conread position: 187-303
Cow position: chr7:63300453-63300336 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 189-289
Cow position: chr7:61758494-61758596 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 189-303
Cow position: chr7:12329974-12330086 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 86

Conread position: 189-303
Cow position: chr7:17000981-17000866 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 191-303
Cow position: chr7:9093528-9093640 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 37, 62

Conread position: 191-303
Cow position: chr7:25464819-25464706 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 192-278
Cow position: chr7:48020674-48020587 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 82
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 192-287
Cow position: chr7:65124899-65124803 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 192-303
Cow position: chr7:14029555-14029449 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 73

Conread position: 192-303
Cow position: chr7:68172908-68173020 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 193-302
Cow position: chr7:51685263-51685155 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 193-303
Cow position: chr7:23615704-23615816 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 193-303
Cow position: chr7:49068589-49068701 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 193-303
Cow position: chr7:67873445-67873333 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 194-281
Cow position: chr7:30666859-30666771 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 194-326
Cow position: chr7:18958293-18958426 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 194-326
Cow position: chr7:29682200-29682336 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 197-299
Cow position: chr7:29604161-29604061 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 10

Conread position: 197-338
Cow position: chr7:35088904-35088761 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 119

Conread position: 198-303
Cow position: chr7:43085120-43085014 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 198-303
Cow position: chr7:52591757-52591863 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 199-303
Cow position: chr7:38360993-38361098 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 429-605
Cow position: chr7:40303061-40303250 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 19

Conread position: 464-606
Cow position: chr7:62953672-62953528 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 59, 108

Conread position: 465-603
Cow position: chr7:14524635-14524496 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 119
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 79, 106

Conread position: 465-604
Cow position: chr7:18947590-18947730 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 106

Conread position: 465-606
Cow position: chr7:4893015-4892878 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 465-606
Cow position: chr7:6116209-6116351 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 106

Conread position: 465-606
Cow position: chr7:9175633-9175491 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 119
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 84, 106

Conread position: 465-606
Cow position: chr7:23251409-23251548 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 17, 85

Conread position: 465-606
Cow position: chr7:24927867-24928009 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 122
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 79, 104

Conread position: 465-606
Cow position: chr7:26911285-26911425 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 17

Conread position: 465-606
Cow position: chr7:40894698-40894555 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 465-606
Cow position: chr7:44454124-44454266 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 106

Conread position: 465-606
Cow position: chr7:48406337-48406481 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 65, 108

Conread position: 465-606
Cow position: chr7:64135311-64135453 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 81, 106

Conread position: 466-599
Cow position: chr7:68540445-68540579 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 80, 105

Conread position: 466-600
Cow position: chr7:45158272-45158142 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 80, 35

Conread position: 466-600
Cow position: chr7:57506626-57506764 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 466-603
Cow position: chr7:36774523-36774385 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 119
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 66, 105

Conread position: 466-604
Cow position: chr7:9200267-9200405 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 81, 104

Conread position: 466-604
Cow position: chr7:53606178-53606309 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 466-605
Cow position: chr7:10886108-10885978 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 42

Conread position: 466-605
Cow position: chr7:17816904-17816764 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 81, 105

Conread position: 466-605
Cow position: chr7:30931822-30931958 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 466-606
Cow position: chr7:7535693-7535554 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 78, 11

Conread position: 466-606
Cow position: chr7:8289754-8289890 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 28

Conread position: 466-606
Cow position: chr7:9161520-9161662 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 69, 106

Conread position: 466-606
Cow position: chr7:13593923-13593783 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 81, 106

Conread position: 466-606
Cow position: chr7:20176554-20176689 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 122
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 78, 19

Conread position: 466-606
Cow position: chr7:23568581-23568720 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 84, 104

Conread position: 466-606
Cow position: chr7:25393454-25393319 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 12

Conread position: 466-606
Cow position: chr7:27980917-27981048 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 466-606
Cow position: chr7:29505270-29505129 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 81, 105

Conread position: 466-606
Cow position: chr7:30818619-30818472 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 466-606
Cow position: chr7:37455473-37455332 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 78, 105

Conread position: 466-606
Cow position: chr7:38361083-38361223 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 78, 98

Conread position: 466-606
Cow position: chr7:38696997-38696857 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 87, 19

Conread position: 466-606
Cow position: chr7:39904249-39904111 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 12

Conread position: 466-606
Cow position: chr7:39947094-39947235 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 119
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 78, 105

Conread position: 466-606
Cow position: chr7:40308364-40308506 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 78, 105

Conread position: 466-606
Cow position: chr7:46823825-46823684 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 80, 105

Conread position: 466-606
Cow position: chr7:48020583-48020434 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 466-606
Cow position: chr7:48721751-48721885 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 466-606
Cow position: chr7:53661552-53661415 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 466-606
Cow position: chr7:54054741-54054602 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 78, 16

Conread position: 466-606
Cow position: chr7:57258868-57259009 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 80, 105

Conread position: 466-606
Cow position: chr7:57518231-57518091 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 19

Conread position: 467-605
Cow position: chr7:50566047-50566186 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 104

Conread position: 467-606
Cow position: chr7:2172904-2172762 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 60, 88

Conread position: 467-606
Cow position: chr7:5853502-5853369 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 467-606
Cow position: chr7:9136992-9136852 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 119
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 79, 104

Conread position: 467-606
Cow position: chr7:24220822-24220682 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 77, 104

Conread position: 468-603
Cow position: chr7:39150103-39149967 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 104

Conread position: 468-605
Cow position: chr7:15755293-15755431 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 103

Conread position: 468-606
Cow position: chr7:168513-168652 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 76, 103

Conread position: 468-606
Cow position: chr7:37952331-37952193 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 14

Conread position: 468-606
Cow position: chr7:47931643-47931782 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 105

Conread position: 474-606
Cow position: chr7:28563243-28563376 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 69, 98

Conread position: 474-606
Cow position: chr7:49630324-49630191 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 73, 99

Conread position: 476-603
Cow position: chr7:15566897-15566769 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 70, 95

Conread position: 479-602
Cow position: chr7:63679214-63679095 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 479-605
Cow position: chr7:5212334-5212461 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 92

Conread position: 491-603
Cow position: chr7:56081726-56081613 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 55, 80

Show alignments to all cow chromosomes.