Cow genome map
Conread name: | Pig3-SRG8021P10 |
Conread position: | 1-375 |
Cow position: | chr11:34112943-34113319 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 267 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 19, 120 |
Conread position: | 1-375 |
Cow position: | chr11:42358804-42359168 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 255 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 24, 62 |
Conread position: | 1-423 |
Cow position: | chr11:44637081-44636650 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 47 |
Conread position: | 1-430 |
Cow position: | chr11:48271875-48272312 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 47 |
Conread position: | 1-430 |
Cow position: | chr11:54334012-54334440 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 132 |
Conread position: | 1-442 |
Cow position: | chr11:44234037-44234479 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 45 |
Conread position: | 1-464 |
Cow position: | chr11:3393530-3393069 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 47 |
Conread position: | 1-502 |
Cow position: | chr11:35579934-35580444 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 20 |
Conread position: | 1-524 |
Cow position: | chr11:7873841-7874344 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 350 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 25, 47 |
Conread position: | 2-360 |
Cow position: | chr11:64090405-64090058 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 250 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 24, 36 |
Conread position: | 2-430 |
Cow position: | chr11:73924878-73924449 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 46 |
Conread position: | 5-457 |
Cow position: | chr11:32595150-32595597 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 43 |
Conread position: | 6-390 |
Cow position: | chr11:16226390-16226769 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 268 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 8, 42 |
Conread position: | 8-449 |
Cow position: | chr11:22978176-22977746 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 298 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 12, 74 |
Conread position: | 34-505 |
Cow position: | chr11:74316418-74316891 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 133 |
Conread position: | 34-507 |
Cow position: | chr11:20761557-20762039 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 109 |
Conread position: | 35-399 |
Cow position: | chr11:35874268-35873925 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 250 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 247, 36 |
Conread position: | 35-509 |
Cow position: | chr11:11125375-11125854 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 102 |
Conread position: | 39-492 |
Cow position: | chr11:75177609-75178070 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 302 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 38, 21 |
Conread position: | 40-377 |
Cow position: | chr11:67804468-67804805 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 237 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 9, 47 |
Conread position: | 40-491 |
Cow position: | chr11:36981285-36981736 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 299 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 28, 114 |
Conread position: | 43-508 |
Cow position: | chr11:67600488-67600966 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 321 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 31, 254 |
Conread position: | 44-464 |
Cow position: | chr11:45646869-45646448 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 30 |
Conread position: | 44-509 |
Cow position: | chr11:80564026-80564486 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 132 |
Conread position: | 46-396 |
Cow position: | chr11:33341422-33341070 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 63 |
Conread position: | 47-418 |
Cow position: | chr11:11232730-11232359 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 86 |
Conread position: | 49-492 |
Cow position: | chr11:17036825-17036360 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 325 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 85, 153 |
Conread position: | 49-505 |
Cow position: | chr11:15632829-15632375 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 25 |
Conread position: | 51-473 |
Cow position: | chr11:62663504-62663088 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 294 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 24, 108 |
Conread position: | 53-430 |
Cow position: | chr11:45898325-45897945 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 266 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 21, 45 |
Conread position: | 58-512 |
Cow position: | chr11:27746653-27747110 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 217 |
Conread position: | 65-491 |
Cow position: | chr11:77319167-77319583 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 280 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 158, 72 |
Conread position: | 66-527 |
Cow position: | chr11:16342497-16342036 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 87 |
Conread position: | 68-323 |
Cow position: | chr11:63516570-63516829 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 191 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 144, 0 |
Conread position: | 69-512 |
Cow position: | chr11:35154080-35153626 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 283 |
Conread position: | 70-518 |
Cow position: | chr11:20238421-20238873 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 92 |
Conread position: | 83-553 |
Cow position: | chr11:62620145-62620608 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 61 |
Conread position: | 92-375 |
Cow position: | chr11:38874631-38874348 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 193 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 104, 16 |
Conread position: | 100-360 |
Cow position: | chr11:2811945-2811691 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 172 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 112, 37 |
Conread position: | 105-509 |
Cow position: | chr11:11557952-11558357 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 279 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 123, 42 |
Conread position: | 108-389 |
Cow position: | chr11:67550578-67550310 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 194 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 112, 35 |
Conread position: | 135-525 |
Cow position: | chr11:34646402-34646802 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 86 |
Conread position: | 136-516 |
Cow position: | chr11:37804743-37804356 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 246 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 60, 318 |
Conread position: | 158-486 |
Cow position: | chr11:81135328-81135003 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 220 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 70, 20 |
Conread position: | 167-483 |
Cow position: | chr11:39499201-39499518 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 206 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 104, 46 |
Conread position: | 199-505 |
Cow position: | chr11:83032558-83032862 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 199 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 19, 83 |
Conread position: | 233-506 |
Cow position: | chr11:63999177-63998903 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 192 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 35, 77 |
Conread position: | 239-509 |
Cow position: | chr11:46922980-46922698 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 199 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 26, 134 |
Conread position: | 239-528 |
Cow position: | chr11:17676452-17676165 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 196 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 162, 28 |
Conread position: | 240-534 |
Cow position: | chr11:17721885-17721590 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 197 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 32, 212 |
Conread position: | 291-502 |
Cow position: | chr11:21885802-21886012 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 153 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 12, 73 |
Show alignments to all cow chromosomes.